RNA–Protein interactions for RNA: ENST00000580723.5

GPS1-213, Transcript of G protein pathway suppressor 1, humanhuman

TSL 4

Gene GPS1, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-213ENST00000580723 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
GPS1-213ENST00000580723 CCDC180Q9P1Z9 1646 aa37.95■■■■□ 3.67
GPS1-213ENST00000580723 ABCC9O60706 1549 aa37.64■■■■□ 3.62
GPS1-213ENST00000580723 RB1CC1Q8TDY2 1594 aa35.86■■■■□ 3.33
GPS1-213ENST00000580723 NACADO15069 1562 aa35.67■■■■□ 3.3
GPS1-213ENST00000580723 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
GPS1-213ENST00000580723 MYO15BQ96JP2 1530 aa35.28■■■■□ 3.24
GPS1-213ENST00000580723 DNAJC5BQ9UF47 199 aa35.21■■■■□ 3.23
GPS1-213ENST00000580723 ZCCHC6Q5VYS8 1495 aaKnown RBP35.17■■■■□ 3.22
GPS1-213ENST00000580723 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
GPS1-213ENST00000580723 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
GPS1-213ENST00000580723 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
GPS1-213ENST00000580723 PABPN1Q86U42 306 aaKnown RBP eCLIP34.93■■■■□ 3.182e-6■□□□□ 11.3
GPS1-213ENST00000580723 SCRIBQ14160 1630 aa34.59■■■■□ 3.13
GPS1-213ENST00000580723 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
GPS1-213ENST00000580723 CC2D2AQ9P2K1 1620 aa34.11■■■■□ 3.05
GPS1-213ENST00000580723 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.05
GPS1-213ENST00000580723 CECR2Q9BXF3 1484 aa33.83■■■■□ 3.01
GPS1-213ENST00000580723 SMARCA4P51532 1647 aa33.02■■■□□ 2.88
GPS1-213ENST00000580723 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
GPS1-213ENST00000580723 ATAD2BQ9ULI0 1458 aa32.91■■■□□ 2.86
GPS1-213ENST00000580723 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
GPS1-213ENST00000580723 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
GPS1-213ENST00000580723 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
GPS1-213ENST00000580723 PEG3Q9GZU2 1588 aa32.71■■■□□ 2.83
GPS1-213ENST00000580723 MROH2BQ7Z745 1585 aa32.67■■■□□ 2.82
GPS1-213ENST00000580723 NESP48681 1621 aa32.51■■■□□ 2.8
GPS1-213ENST00000580723 BAZ1BQ9UIG0 1483 aaKnown RBP32.51■■■□□ 2.79
GPS1-213ENST00000580723 WIZO95785 1651 aa32.32■■■□□ 2.76
GPS1-213ENST00000580723 CUX2O14529 1486 aa32.29■■■□□ 2.76
GPS1-213ENST00000580723 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
GPS1-213ENST00000580723 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
GPS1-213ENST00000580723 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
GPS1-213ENST00000580723 LAMC3Q9Y6N6 1575 aa32.18■■■□□ 2.74
GPS1-213ENST00000580723 DNAJC5Q9H3Z4 198 aa31.95■■■□□ 2.71
GPS1-213ENST00000580723 RSF1Q96T23 1441 aaPredicted RBP31.94■■■□□ 2.7
GPS1-213ENST00000580723 CADPSQ9ULU8 1353 aa31.84■■■□□ 2.69
GPS1-213ENST00000580723 TOP2AP11388 1531 aaKnown RBP31.84■■■□□ 2.69
GPS1-213ENST00000580723 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
GPS1-213ENST00000580723 WDR62O43379 1518 aa31.73■■■□□ 2.67
GPS1-213ENST00000580723 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
GPS1-213ENST00000580723 CFTRP13569 1480 aa31.64■■■□□ 2.66
GPS1-213ENST00000580723 FANCD2Q9BXW9 1451 aa31.56■■■□□ 2.64
GPS1-213ENST00000580723 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
GPS1-213ENST00000580723 CEP164Q9UPV0 1460 aa31.55■■■□□ 2.64
GPS1-213ENST00000580723 URB2Q14146 1524 aaKnown RBP31.45■■■□□ 2.63
GPS1-213ENST00000580723 CCDC88BA6NC98 1476 aa31.41■■■□□ 2.62
GPS1-213ENST00000580723 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
GPS1-213ENST00000580723 ZNF608Q9ULD9 1512 aaPredicted RBP31.02■■■□□ 2.56
GPS1-213ENST00000580723 DNMBPQ6XZF7 1577 aa30.97■■■□□ 2.55
GPS1-213ENST00000580723 EIF4G3O43432 1585 aaKnown RBP30.91■■■□□ 2.54
GPS1-213ENST00000580723 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
GPS1-213ENST00000580723 IFT140Q96RY7 1462 aa30.89■■■□□ 2.54
GPS1-213ENST00000580723 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
GPS1-213ENST00000580723 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
GPS1-213ENST00000580723 CUX1P39880 1505 aa30.68■■■□□ 2.5
GPS1-213ENST00000580723 CHD1O14646 1710 aa30.68■■■□□ 2.5
GPS1-213ENST00000580723 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
GPS1-213ENST00000580723 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
GPS1-213ENST00000580723 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
GPS1-213ENST00000580723 RIMBP3CA6NJZ7 1639 aa30.61■■■□□ 2.49
GPS1-213ENST00000580723 RIMBP3BA6NNM3 1639 aa30.61■■■□□ 2.49
GPS1-213ENST00000580723 RIMBP3Q9UFD9 1639 aa30.61■■■□□ 2.49
GPS1-213ENST00000580723 FGD5Q6ZNL6 1462 aa30.58■■■□□ 2.49
GPS1-213ENST00000580723 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
GPS1-213ENST00000580723 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
GPS1-213ENST00000580723 ARHGEF11O15085 1522 aa30.46■■■□□ 2.47
GPS1-213ENST00000580723 SOGA1O94964 1423 aa30.42■■■□□ 2.46
GPS1-213ENST00000580723 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
GPS1-213ENST00000580723 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
GPS1-213ENST00000580723 PBRM1Q86U86 1689 aa30.36■■■□□ 2.45
GPS1-213ENST00000580723 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
GPS1-213ENST00000580723 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
GPS1-213ENST00000580723 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
GPS1-213ENST00000580723 BIVM-ERCC5R4GMW8 1640 aa30.28■■■□□ 2.44
GPS1-213ENST00000580723 SYNJ1O43426 1573 aa30.27■■■□□ 2.44
GPS1-213ENST00000580723 ARAP1Q96P48 1450 aa30.24■■■□□ 2.43
GPS1-213ENST00000580723 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
GPS1-213ENST00000580723 MAGI1Q96QZ7 1491 aaPredicted RBP30.22■■■□□ 2.43
GPS1-213ENST00000580723 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
GPS1-213ENST00000580723 TOP2BQ02880 1626 aa30.19■■■□□ 2.42
GPS1-213ENST00000580723 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
GPS1-213ENST00000580723 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
GPS1-213ENST00000580723 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
GPS1-213ENST00000580723 FBLN2P98095 1184 aa30.05■■■□□ 2.4
GPS1-213ENST00000580723 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
GPS1-213ENST00000580723 CEP170Q5SW79 1584 aa29.95■■■□□ 2.39
GPS1-213ENST00000580723 ERCC6L2Q5T890 1561 aa29.93■■■□□ 2.38
GPS1-213ENST00000580723 CYB5RLQ6IPT4 315 aa29.9■■■□□ 2.38
GPS1-213ENST00000580723 GRIN2AQ12879 1464 aa29.9■■■□□ 2.38
GPS1-213ENST00000580723 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
GPS1-213ENST00000580723 NUP160Q12769 1436 aa29.84■■■□□ 2.37
GPS1-213ENST00000580723 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
GPS1-213ENST00000580723 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
GPS1-213ENST00000580723 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
GPS1-213ENST00000580723 RUSC2Q8N2Y8 1516 aa29.66■■■□□ 2.34
GPS1-213ENST00000580723 CUL7Q14999 1698 aa29.47■■■□□ 2.31
GPS1-213ENST00000580723 IGF1RP08069 1367 aa29.4■■■□□ 2.3
GPS1-213ENST00000580723 PRG4Q92954 1404 aaPredicted RBP29.38■■■□□ 2.29
GPS1-213ENST00000580723 TRHP20396 242 aaPredicted RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms