RNA–Protein interactions for RNA: ENST00000491316.5

LCN12-210, Transcript of lipocalin 12, humanhuman

TSL 3

Gene LCN12, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN12-210ENST00000491316 NISCHQ9Y2I1 1504 aa37.86■■■■□ 3.65
LCN12-210ENST00000491316 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
LCN12-210ENST00000491316 ABCC9O60706 1549 aa33.78■■■■□ 3
LCN12-210ENST00000491316 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
LCN12-210ENST00000491316 NACADO15069 1562 aa32.15■■■□□ 2.74
LCN12-210ENST00000491316 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
LCN12-210ENST00000491316 MYO15BQ96JP2 1530 aa31.72■■■□□ 2.67
LCN12-210ENST00000491316 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
LCN12-210ENST00000491316 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
LCN12-210ENST00000491316 DCAF1Q9Y4B6 1507 aa31.35■■■□□ 2.61
LCN12-210ENST00000491316 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.61
LCN12-210ENST00000491316 DNAJC5BQ9UF47 199 aa31.3■■■□□ 2.6
LCN12-210ENST00000491316 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
LCN12-210ENST00000491316 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
LCN12-210ENST00000491316 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
LCN12-210ENST00000491316 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
LCN12-210ENST00000491316 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
LCN12-210ENST00000491316 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.47
LCN12-210ENST00000491316 SMARCA4P51532 1647 aa29.57■■■□□ 2.32
LCN12-210ENST00000491316 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
LCN12-210ENST00000491316 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
LCN12-210ENST00000491316 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
LCN12-210ENST00000491316 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
LCN12-210ENST00000491316 HMGXB3Q12766 1538 aa29.47■■■□□ 2.31
LCN12-210ENST00000491316 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
LCN12-210ENST00000491316 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
LCN12-210ENST00000491316 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
LCN12-210ENST00000491316 CUX2O14529 1486 aa29.18■■■□□ 2.26
LCN12-210ENST00000491316 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
LCN12-210ENST00000491316 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
LCN12-210ENST00000491316 NESP48681 1621 aa28.99■■■□□ 2.23
LCN12-210ENST00000491316 WIZO95785 1651 aa28.83■■■□□ 2.21
LCN12-210ENST00000491316 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
LCN12-210ENST00000491316 THOC2Q8NI27 1593 aaKnown RBP28.81■■■□□ 2.2
LCN12-210ENST00000491316 PDS5BQ9NTI5 1447 aa28.8■■■□□ 2.2
LCN12-210ENST00000491316 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
LCN12-210ENST00000491316 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
LCN12-210ENST00000491316 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
LCN12-210ENST00000491316 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
LCN12-210ENST00000491316 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
LCN12-210ENST00000491316 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
LCN12-210ENST00000491316 WDR62O43379 1518 aa28.45■■■□□ 2.15
LCN12-210ENST00000491316 FANCD2Q9BXW9 1451 aa28.39■■■□□ 2.13
LCN12-210ENST00000491316 CFTRP13569 1480 aa28.38■■■□□ 2.13
LCN12-210ENST00000491316 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
LCN12-210ENST00000491316 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
LCN12-210ENST00000491316 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
LCN12-210ENST00000491316 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
LCN12-210ENST00000491316 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
LCN12-210ENST00000491316 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
LCN12-210ENST00000491316 DNMBPQ6XZF7 1577 aa27.84■■■□□ 2.05
LCN12-210ENST00000491316 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
LCN12-210ENST00000491316 EIF4G3O43432 1585 aaKnown RBP27.7■■■□□ 2.03
LCN12-210ENST00000491316 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
LCN12-210ENST00000491316 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
LCN12-210ENST00000491316 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
LCN12-210ENST00000491316 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
LCN12-210ENST00000491316 WDR97A6NE52 1622 aa27.51■■□□□ 1.99
LCN12-210ENST00000491316 CHD1O14646 1710 aa27.49■■□□□ 1.99
LCN12-210ENST00000491316 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.98
LCN12-210ENST00000491316 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.98
LCN12-210ENST00000491316 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.98
LCN12-210ENST00000491316 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
LCN12-210ENST00000491316 SOGA1O94964 1423 aa27.43■■□□□ 1.98
LCN12-210ENST00000491316 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
LCN12-210ENST00000491316 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
LCN12-210ENST00000491316 CUX1P39880 1505 aa27.38■■□□□ 1.97
LCN12-210ENST00000491316 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
LCN12-210ENST00000491316 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
LCN12-210ENST00000491316 FBLN2P98095 1184 aa27.32■■□□□ 1.96
LCN12-210ENST00000491316 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
LCN12-210ENST00000491316 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
LCN12-210ENST00000491316 MAGI1Q96QZ7 1491 aaPredicted RBP27.27■■□□□ 1.96
LCN12-210ENST00000491316 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
LCN12-210ENST00000491316 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
LCN12-210ENST00000491316 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
LCN12-210ENST00000491316 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
LCN12-210ENST00000491316 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
LCN12-210ENST00000491316 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
LCN12-210ENST00000491316 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
LCN12-210ENST00000491316 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
LCN12-210ENST00000491316 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
LCN12-210ENST00000491316 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
LCN12-210ENST00000491316 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
LCN12-210ENST00000491316 TOP2BQ02880 1626 aa27.06■■□□□ 1.92
LCN12-210ENST00000491316 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
LCN12-210ENST00000491316 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
LCN12-210ENST00000491316 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
LCN12-210ENST00000491316 GRIN2AQ12879 1464 aa26.88■■□□□ 1.89
LCN12-210ENST00000491316 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
LCN12-210ENST00000491316 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
LCN12-210ENST00000491316 TRHP20396 242 aaPredicted RBP26.81■■□□□ 1.88
LCN12-210ENST00000491316 CEP170Q5SW79 1584 aa26.75■■□□□ 1.87
LCN12-210ENST00000491316 NUP160Q12769 1436 aa26.74■■□□□ 1.87
LCN12-210ENST00000491316 SHROOM2Q13796 1616 aa26.67■■□□□ 1.86
LCN12-210ENST00000491316 CUL7Q14999 1698 aa26.57■■□□□ 1.84
LCN12-210ENST00000491316 ERCC6L2Q5T890 1561 aa26.57■■□□□ 1.84
LCN12-210ENST00000491316 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
LCN12-210ENST00000491316 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
LCN12-210ENST00000491316 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms