RNA–Protein interactions for RNA: ENST00000533283.5

MDK-211, Transcript of midkine, humanhuman

TSL 3

Gene MDK, Length 498 nt, Biotype processed transcript, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-211ENST00000533283 NISCHQ9Y2I1 1504 aa37.25■■■■□ 3.55
MDK-211ENST00000533283 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
MDK-211ENST00000533283 ABCC9O60706 1549 aa32.31■■■□□ 2.76
MDK-211ENST00000533283 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
MDK-211ENST00000533283 NACADO15069 1562 aa31.06■■■□□ 2.56
MDK-211ENST00000533283 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
MDK-211ENST00000533283 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
MDK-211ENST00000533283 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
MDK-211ENST00000533283 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
MDK-211ENST00000533283 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
MDK-211ENST00000533283 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
MDK-211ENST00000533283 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
MDK-211ENST00000533283 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
MDK-211ENST00000533283 DNAJC5BQ9UF47 199 aa29.89■■■□□ 2.38
MDK-211ENST00000533283 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
MDK-211ENST00000533283 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
MDK-211ENST00000533283 CC2D2AQ9P2K1 1620 aa29.24■■■□□ 2.27
MDK-211ENST00000533283 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
MDK-211ENST00000533283 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
MDK-211ENST00000533283 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
MDK-211ENST00000533283 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
MDK-211ENST00000533283 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
MDK-211ENST00000533283 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
MDK-211ENST00000533283 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
MDK-211ENST00000533283 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
MDK-211ENST00000533283 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
MDK-211ENST00000533283 DNAJC5Q9H3Z4 198 aa28.5■■■□□ 2.15
MDK-211ENST00000533283 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
MDK-211ENST00000533283 WIZO95785 1651 aa28.44■■■□□ 2.14
MDK-211ENST00000533283 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
MDK-211ENST00000533283 TOP2AP11388 1531 aaKnown RBP28.09■■■□□ 2.09
MDK-211ENST00000533283 NESP48681 1621 aa28.01■■■□□ 2.07
MDK-211ENST00000533283 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
MDK-211ENST00000533283 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
MDK-211ENST00000533283 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
MDK-211ENST00000533283 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
MDK-211ENST00000533283 ERCC6Q03468 1493 aa27.78■■■□□ 2.04
MDK-211ENST00000533283 CFTRP13569 1480 aa27.7■■■□□ 2.02
MDK-211ENST00000533283 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
MDK-211ENST00000533283 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
MDK-211ENST00000533283 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
MDK-211ENST00000533283 PRDM2Q13029 1718 aa27.53■■■□□ 2
MDK-211ENST00000533283 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
MDK-211ENST00000533283 CUX2O14529 1486 aa27.49■■□□□ 1.99
MDK-211ENST00000533283 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
MDK-211ENST00000533283 MRC2Q9UBG0 1479 aa27.42■■□□□ 1.98
MDK-211ENST00000533283 WDR62O43379 1518 aa27.34■■□□□ 1.97
MDK-211ENST00000533283 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
MDK-211ENST00000533283 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
MDK-211ENST00000533283 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
MDK-211ENST00000533283 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
MDK-211ENST00000533283 CUX1P39880 1505 aa26.95■■□□□ 1.9
MDK-211ENST00000533283 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
MDK-211ENST00000533283 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
MDK-211ENST00000533283 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
MDK-211ENST00000533283 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
MDK-211ENST00000533283 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
MDK-211ENST00000533283 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
MDK-211ENST00000533283 SOGA1O94964 1423 aa26.74■■□□□ 1.87
MDK-211ENST00000533283 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
MDK-211ENST00000533283 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
MDK-211ENST00000533283 SYNJ1O43426 1573 aa26.72■■□□□ 1.87
MDK-211ENST00000533283 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
MDK-211ENST00000533283 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
MDK-211ENST00000533283 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
MDK-211ENST00000533283 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.861e-9■■■■■ 32.7
MDK-211ENST00000533283 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
MDK-211ENST00000533283 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
MDK-211ENST00000533283 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
MDK-211ENST00000533283 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
MDK-211ENST00000533283 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
MDK-211ENST00000533283 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
MDK-211ENST00000533283 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
MDK-211ENST00000533283 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
MDK-211ENST00000533283 CHD1O14646 1710 aa26.37■■□□□ 1.81
MDK-211ENST00000533283 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
MDK-211ENST00000533283 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
MDK-211ENST00000533283 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
MDK-211ENST00000533283 FBLN2P98095 1184 aa26.27■■□□□ 1.8
MDK-211ENST00000533283 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
MDK-211ENST00000533283 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
MDK-211ENST00000533283 CHMP7Q8WUX9 453 aaPredicted RBP26.2■■□□□ 1.78
MDK-211ENST00000533283 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
MDK-211ENST00000533283 KIF27Q86VH2 1401 aa26.16■■□□□ 1.78
MDK-211ENST00000533283 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
MDK-211ENST00000533283 IGF1RP08069 1367 aa26.1■■□□□ 1.77
MDK-211ENST00000533283 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
MDK-211ENST00000533283 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
MDK-211ENST00000533283 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
MDK-211ENST00000533283 CUL7Q14999 1698 aa25.99■■□□□ 1.75
MDK-211ENST00000533283 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
MDK-211ENST00000533283 NUP160Q12769 1436 aa25.99■■□□□ 1.75
MDK-211ENST00000533283 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
MDK-211ENST00000533283 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
MDK-211ENST00000533283 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
MDK-211ENST00000533283 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
MDK-211ENST00000533283 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
MDK-211ENST00000533283 EEA1Q15075 1411 aa25.83■■□□□ 1.73
MDK-211ENST00000533283 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
MDK-211ENST00000533283 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms