RNA–Protein interactions for RNA: ENST00000583885.5

GPS1-220, Transcript of G protein pathway suppressor 1, humanhuman

TSL 4

Gene GPS1, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-220ENST00000583885 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
GPS1-220ENST00000583885 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
GPS1-220ENST00000583885 ABCC9O60706 1549 aa25.98■■□□□ 1.75
GPS1-220ENST00000583885 NACADO15069 1562 aa25.01■■□□□ 1.59
GPS1-220ENST00000583885 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
GPS1-220ENST00000583885 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
GPS1-220ENST00000583885 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
GPS1-220ENST00000583885 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
GPS1-220ENST00000583885 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
GPS1-220ENST00000583885 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
GPS1-220ENST00000583885 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
GPS1-220ENST00000583885 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
GPS1-220ENST00000583885 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
GPS1-220ENST00000583885 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.472e-6■□□□□ 11.3
GPS1-220ENST00000583885 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
GPS1-220ENST00000583885 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
GPS1-220ENST00000583885 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
GPS1-220ENST00000583885 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
GPS1-220ENST00000583885 DNAJC5Q9H3Z4 198 aa23.32■■□□□ 1.32
GPS1-220ENST00000583885 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
GPS1-220ENST00000583885 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
GPS1-220ENST00000583885 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
GPS1-220ENST00000583885 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
GPS1-220ENST00000583885 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
GPS1-220ENST00000583885 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
GPS1-220ENST00000583885 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
GPS1-220ENST00000583885 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
GPS1-220ENST00000583885 WIZO95785 1651 aa22.92■■□□□ 1.26
GPS1-220ENST00000583885 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
GPS1-220ENST00000583885 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
GPS1-220ENST00000583885 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
GPS1-220ENST00000583885 NESP48681 1621 aa22.56■■□□□ 1.2
GPS1-220ENST00000583885 CUX2O14529 1486 aa22.47■■□□□ 1.19
GPS1-220ENST00000583885 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
GPS1-220ENST00000583885 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
GPS1-220ENST00000583885 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
GPS1-220ENST00000583885 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
GPS1-220ENST00000583885 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
GPS1-220ENST00000583885 CFTRP13569 1480 aa22.28■■□□□ 1.16
GPS1-220ENST00000583885 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
GPS1-220ENST00000583885 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
GPS1-220ENST00000583885 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
GPS1-220ENST00000583885 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
GPS1-220ENST00000583885 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
GPS1-220ENST00000583885 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
GPS1-220ENST00000583885 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
GPS1-220ENST00000583885 MRC2Q9UBG0 1479 aa22.04■■□□□ 1.12
GPS1-220ENST00000583885 WDR62O43379 1518 aa22.03■■□□□ 1.12
GPS1-220ENST00000583885 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
GPS1-220ENST00000583885 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
GPS1-220ENST00000583885 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
GPS1-220ENST00000583885 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
GPS1-220ENST00000583885 CUX1P39880 1505 aa21.69■■□□□ 1.06
GPS1-220ENST00000583885 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
GPS1-220ENST00000583885 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
GPS1-220ENST00000583885 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
GPS1-220ENST00000583885 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
GPS1-220ENST00000583885 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
GPS1-220ENST00000583885 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
GPS1-220ENST00000583885 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
GPS1-220ENST00000583885 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
GPS1-220ENST00000583885 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
GPS1-220ENST00000583885 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
GPS1-220ENST00000583885 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
GPS1-220ENST00000583885 SOGA1O94964 1423 aa21.48■■□□□ 1.03
GPS1-220ENST00000583885 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
GPS1-220ENST00000583885 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
GPS1-220ENST00000583885 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
GPS1-220ENST00000583885 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
GPS1-220ENST00000583885 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
GPS1-220ENST00000583885 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
GPS1-220ENST00000583885 PBRM1Q86U86 1689 aa21.32■■□□□ 1
GPS1-220ENST00000583885 CHD1O14646 1710 aa21.3■■□□□ 1
GPS1-220ENST00000583885 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
GPS1-220ENST00000583885 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
GPS1-220ENST00000583885 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
GPS1-220ENST00000583885 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
GPS1-220ENST00000583885 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
GPS1-220ENST00000583885 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
GPS1-220ENST00000583885 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
GPS1-220ENST00000583885 SYNJ2O15056 1496 aa21.1■□□□□ 0.97
GPS1-220ENST00000583885 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
GPS1-220ENST00000583885 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
GPS1-220ENST00000583885 FBLN2P98095 1184 aa21.03■□□□□ 0.96
GPS1-220ENST00000583885 ARHGEF11O15085 1522 aa21.02■□□□□ 0.96
GPS1-220ENST00000583885 CLASP1Q7Z460 1538 aa21.01■□□□□ 0.95
GPS1-220ENST00000583885 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
GPS1-220ENST00000583885 IGF1RP08069 1367 aa20.98■□□□□ 0.95
GPS1-220ENST00000583885 FHAD1B1AJZ9 1412 aa20.98■□□□□ 0.95
GPS1-220ENST00000583885 KIF27Q86VH2 1401 aa20.98■□□□□ 0.95
GPS1-220ENST00000583885 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
GPS1-220ENST00000583885 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
GPS1-220ENST00000583885 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
GPS1-220ENST00000583885 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
GPS1-220ENST00000583885 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
GPS1-220ENST00000583885 CUL7Q14999 1698 aa20.93■□□□□ 0.94
GPS1-220ENST00000583885 NUP160Q12769 1436 aa20.91■□□□□ 0.94
GPS1-220ENST00000583885 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
GPS1-220ENST00000583885 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
GPS1-220ENST00000583885 CARMIL1Q5VZK9 1371 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms