RNA–Protein interactions for RNA: ENST00000335214.8

PES1-201, Transcript of pescadillo ribosomal biogenesis factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PES1, Length 1,988 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PES1-201ENST00000335214 NISCHQ9Y2I1 1504 aa32.76■■■□□ 2.83
PES1-201ENST00000335214 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
PES1-201ENST00000335214 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
PES1-201ENST00000335214 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
PES1-201ENST00000335214 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
PES1-201ENST00000335214 DCAF8L2P0C7V8 631 aa27.02■■□□□ 1.92
PES1-201ENST00000335214 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
PES1-201ENST00000335214 ABCC9O60706 1549 aa26.57■■□□□ 1.84
PES1-201ENST00000335214 NACADO15069 1562 aa26.35■■□□□ 1.81
PES1-201ENST00000335214 SUPT5HO00267 1087 aaKnown RBP26.19■■□□□ 1.78
PES1-201ENST00000335214 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
PES1-201ENST00000335214 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
PES1-201ENST00000335214 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
PES1-201ENST00000335214 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
PES1-201ENST00000335214 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
PES1-201ENST00000335214 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
PES1-201ENST00000335214 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
PES1-201ENST00000335214 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
PES1-201ENST00000335214 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
PES1-201ENST00000335214 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
PES1-201ENST00000335214 WIZO95785 1651 aa25.13■■□□□ 1.61
PES1-201ENST00000335214 SMARCA4P51532 1647 aa25.09■■□□□ 1.61
PES1-201ENST00000335214 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
PES1-201ENST00000335214 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
PES1-201ENST00000335214 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
PES1-201ENST00000335214 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
PES1-201ENST00000335214 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
PES1-201ENST00000335214 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
PES1-201ENST00000335214 HRCP23327 699 aa24.58■■□□□ 1.53
PES1-201ENST00000335214 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
PES1-201ENST00000335214 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
PES1-201ENST00000335214 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
PES1-201ENST00000335214 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
PES1-201ENST00000335214 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
PES1-201ENST00000335214 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
PES1-201ENST00000335214 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
PES1-201ENST00000335214 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
PES1-201ENST00000335214 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
PES1-201ENST00000335214 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
PES1-201ENST00000335214 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
PES1-201ENST00000335214 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
PES1-201ENST00000335214 CFTRP13569 1480 aa23.91■■□□□ 1.42
PES1-201ENST00000335214 SOGA1O94964 1423 aa23.88■■□□□ 1.41
PES1-201ENST00000335214 EEA1Q15075 1411 aa23.88■■□□□ 1.41
PES1-201ENST00000335214 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
PES1-201ENST00000335214 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
PES1-201ENST00000335214 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
PES1-201ENST00000335214 RUSC2Q8N2Y8 1516 aa23.76■■□□□ 1.39
PES1-201ENST00000335214 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
PES1-201ENST00000335214 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
PES1-201ENST00000335214 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
PES1-201ENST00000335214 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
PES1-201ENST00000335214 CUX1P39880 1505 aa23.66■■□□□ 1.38
PES1-201ENST00000335214 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
PES1-201ENST00000335214 GOLGA3Q08378 1498 aa23.57■■□□□ 1.36
PES1-201ENST00000335214 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
PES1-201ENST00000335214 KIF21BO75037 1637 aa23.53■■□□□ 1.36
PES1-201ENST00000335214 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
PES1-201ENST00000335214 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
PES1-201ENST00000335214 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
PES1-201ENST00000335214 CEP162Q5TB80 1403 aa23.48■■□□□ 1.35
PES1-201ENST00000335214 NESP48681 1621 aa23.44■■□□□ 1.34
PES1-201ENST00000335214 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
PES1-201ENST00000335214 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PES1-201ENST00000335214 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
PES1-201ENST00000335214 RAPGEF2Q9Y4G8 1499 aa23.37■■□□□ 1.33
PES1-201ENST00000335214 FGD5Q6ZNL6 1462 aa23.35■■□□□ 1.33
PES1-201ENST00000335214 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
PES1-201ENST00000335214 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
PES1-201ENST00000335214 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
PES1-201ENST00000335214 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
PES1-201ENST00000335214 CUX2O14529 1486 aa23.28■■□□□ 1.32
PES1-201ENST00000335214 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
PES1-201ENST00000335214 CLIP1P30622 1438 aa23.22■■□□□ 1.31
PES1-201ENST00000335214 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
PES1-201ENST00000335214 IGF1RP08069 1367 aa23.19■■□□□ 1.3
PES1-201ENST00000335214 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
PES1-201ENST00000335214 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.3
PES1-201ENST00000335214 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
PES1-201ENST00000335214 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
PES1-201ENST00000335214 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.28
PES1-201ENST00000335214 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
PES1-201ENST00000335214 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
PES1-201ENST00000335214 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
PES1-201ENST00000335214 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
PES1-201ENST00000335214 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
PES1-201ENST00000335214 CUL7Q14999 1698 aa22.92■■□□□ 1.26
PES1-201ENST00000335214 ABCA5Q8WWZ7 1642 aa22.91■■□□□ 1.26
PES1-201ENST00000335214 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
PES1-201ENST00000335214 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
PES1-201ENST00000335214 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
PES1-201ENST00000335214 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
PES1-201ENST00000335214 ARHGAP35Q9NRY4 1499 aa22.87■■□□□ 1.25
PES1-201ENST00000335214 APLP2Q06481 763 aa22.87■■□□□ 1.25
PES1-201ENST00000335214 WDR62O43379 1518 aa22.79■■□□□ 1.24
PES1-201ENST00000335214 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
PES1-201ENST00000335214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
PES1-201ENST00000335214 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
PES1-201ENST00000335214 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
PES1-201ENST00000335214 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms