RNA–Protein interactions for RNA: ENST00000494713.5

LCN12-213, Transcript of lipocalin 12, humanhuman

TSL 2

Gene LCN12, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN12-213ENST00000494713 NISCHQ9Y2I1 1504 aa38.88■■■■□ 3.81
LCN12-213ENST00000494713 CCDC180Q9P1Z9 1646 aa34.79■■■■□ 3.16
LCN12-213ENST00000494713 ABCC9O60706 1549 aa34.53■■■■□ 3.12
LCN12-213ENST00000494713 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
LCN12-213ENST00000494713 NACADO15069 1562 aa32.89■■■□□ 2.86
LCN12-213ENST00000494713 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
LCN12-213ENST00000494713 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
LCN12-213ENST00000494713 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
LCN12-213ENST00000494713 DNAJC5BQ9UF47 199 aa32.22■■■□□ 2.75
LCN12-213ENST00000494713 PABPN1Q86U42 306 aaKnown RBP eCLIP32.21■■■□□ 2.75
LCN12-213ENST00000494713 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
LCN12-213ENST00000494713 DCAF1Q9Y4B6 1507 aa32.19■■■□□ 2.74
LCN12-213ENST00000494713 BICRAQ9NZM4 1560 aa31.99■■■□□ 2.71
LCN12-213ENST00000494713 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
LCN12-213ENST00000494713 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
LCN12-213ENST00000494713 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
LCN12-213ENST00000494713 CC2D2AQ9P2K1 1620 aa31.22■■■□□ 2.59
LCN12-213ENST00000494713 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.57
LCN12-213ENST00000494713 NCAPD3P42695 1498 aa30.37■■■□□ 2.45
LCN12-213ENST00000494713 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.44
LCN12-213ENST00000494713 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
LCN12-213ENST00000494713 SMARCA2P51531 1590 aa30.22■■■□□ 2.43
LCN12-213ENST00000494713 BAZ1AQ9NRL2 1556 aaPredicted RBP30.18■■■□□ 2.42
LCN12-213ENST00000494713 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
LCN12-213ENST00000494713 PEG3Q9GZU2 1588 aa30.01■■■□□ 2.39
LCN12-213ENST00000494713 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
LCN12-213ENST00000494713 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
LCN12-213ENST00000494713 ERCC6Q03468 1493 aa29.86■■■□□ 2.37
LCN12-213ENST00000494713 CUX2O14529 1486 aa29.76■■■□□ 2.35
LCN12-213ENST00000494713 NESP48681 1621 aa29.7■■■□□ 2.34
LCN12-213ENST00000494713 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
LCN12-213ENST00000494713 WIZO95785 1651 aa29.53■■■□□ 2.32
LCN12-213ENST00000494713 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
LCN12-213ENST00000494713 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
LCN12-213ENST00000494713 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
LCN12-213ENST00000494713 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
LCN12-213ENST00000494713 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
LCN12-213ENST00000494713 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
LCN12-213ENST00000494713 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
LCN12-213ENST00000494713 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
LCN12-213ENST00000494713 CFTRP13569 1480 aa29.15■■■□□ 2.26
LCN12-213ENST00000494713 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
LCN12-213ENST00000494713 WDR62O43379 1518 aa29.07■■■□□ 2.24
LCN12-213ENST00000494713 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
LCN12-213ENST00000494713 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
LCN12-213ENST00000494713 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
LCN12-213ENST00000494713 URB2Q14146 1524 aaKnown RBP28.79■■■□□ 2.2
LCN12-213ENST00000494713 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
LCN12-213ENST00000494713 TOPBP1Q92547 1522 aa28.53■■■□□ 2.16
LCN12-213ENST00000494713 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
LCN12-213ENST00000494713 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
LCN12-213ENST00000494713 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
LCN12-213ENST00000494713 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
LCN12-213ENST00000494713 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
LCN12-213ENST00000494713 TRIM41Q8WV44 630 aa28.25■■■□□ 2.11
LCN12-213ENST00000494713 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
LCN12-213ENST00000494713 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
LCN12-213ENST00000494713 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
LCN12-213ENST00000494713 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.1
LCN12-213ENST00000494713 SOGA1O94964 1423 aa28.18■■■□□ 2.1
LCN12-213ENST00000494713 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
LCN12-213ENST00000494713 FGD5Q6ZNL6 1462 aa28.09■■■□□ 2.09
LCN12-213ENST00000494713 CUX1P39880 1505 aa28.09■■■□□ 2.09
LCN12-213ENST00000494713 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
LCN12-213ENST00000494713 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
LCN12-213ENST00000494713 FBLN2P98095 1184 aa27.99■■■□□ 2.07
LCN12-213ENST00000494713 CHD1O14646 1710 aa27.97■■■□□ 2.07
LCN12-213ENST00000494713 RIMBP3CA6NJZ7 1639 aa27.96■■■□□ 2.07
LCN12-213ENST00000494713 RIMBP3BA6NNM3 1639 aa27.96■■■□□ 2.07
LCN12-213ENST00000494713 RIMBP3Q9UFD9 1639 aa27.96■■■□□ 2.07
LCN12-213ENST00000494713 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
LCN12-213ENST00000494713 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
LCN12-213ENST00000494713 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.06
LCN12-213ENST00000494713 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.05
LCN12-213ENST00000494713 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
LCN12-213ENST00000494713 ABCA10Q8WWZ4 1543 aa27.84■■■□□ 2.05
LCN12-213ENST00000494713 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
LCN12-213ENST00000494713 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
LCN12-213ENST00000494713 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
LCN12-213ENST00000494713 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
LCN12-213ENST00000494713 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
LCN12-213ENST00000494713 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
LCN12-213ENST00000494713 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
LCN12-213ENST00000494713 ABCA5Q8WWZ7 1642 aa27.71■■■□□ 2.03
LCN12-213ENST00000494713 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
LCN12-213ENST00000494713 CLASP1Q7Z460 1538 aa27.69■■■□□ 2.02
LCN12-213ENST00000494713 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
LCN12-213ENST00000494713 GRIN2AQ12879 1464 aa27.51■■■□□ 2
LCN12-213ENST00000494713 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
LCN12-213ENST00000494713 ERICH3Q5RHP9 1530 aa27.5■■□□□ 1.99
LCN12-213ENST00000494713 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
LCN12-213ENST00000494713 NUP160Q12769 1436 aa27.43■■□□□ 1.98
LCN12-213ENST00000494713 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
LCN12-213ENST00000494713 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
LCN12-213ENST00000494713 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
LCN12-213ENST00000494713 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
LCN12-213ENST00000494713 JPH4Q96JJ6 628 aa27.22■■□□□ 1.95
LCN12-213ENST00000494713 IGF1RP08069 1367 aa27.22■■□□□ 1.95
LCN12-213ENST00000494713 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
LCN12-213ENST00000494713 PRG4Q92954 1404 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms