RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
NUP85-213ENST00000579838 AEBP2Q6ZN18 517 aaPredicted RBP10.67□□□□□ -0.7
NUP85-213ENST00000579838 NISCHQ9Y2I1 1504 aa10.38□□□□□ -0.75
NUP85-213ENST00000579838 CHIC1Q5VXU3 224 aa9.97□□□□□ -0.81
NUP85-213ENST00000579838 SENP3Q9H4L4 574 aaPredicted RBP9.35□□□□□ -0.91
NUP85-213ENST00000579838 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
NUP85-213ENST00000579838 PHF23Q9BUL5 403 aaPredicted RBP9□□□□□ -0.97
NUP85-213ENST00000579838 FOXD1Q16676 465 aa8.83□□□□□ -1
NUP85-213ENST00000579838 MSH5O43196 834 aa8.82□□□□□ -1
NUP85-213ENST00000579838 ZCCHC6Q5VYS8 1495 aaKnown RBP8.77□□□□□ -1.01
NUP85-213ENST00000579838 SHROOM4Q9ULL8 1493 aa8.6□□□□□ -1.03
NUP85-213ENST00000579838 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
NUP85-213ENST00000579838 DCAF8L2P0C7V8 631 aa8.41□□□□□ -1.06
NUP85-213ENST00000579838 ABCC9O60706 1549 aa8.39□□□□□ -1.07
NUP85-213ENST00000579838 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
NUP85-213ENST00000579838 MYO15BQ96JP2 1530 aa8.34□□□□□ -1.08
NUP85-213ENST00000579838 NACADO15069 1562 aa8.29□□□□□ -1.08
NUP85-213ENST00000579838 CACNB1Q02641 598 aaPredicted RBP8.28□□□□□ -1.08
NUP85-213ENST00000579838 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
NUP85-213ENST00000579838 UNC13AQ9UPW8 1703 aa8.25□□□□□ -1.09
NUP85-213ENST00000579838 RB1CC1Q8TDY2 1594 aa8.21□□□□□ -1.1
NUP85-213ENST00000579838 POTEHQ6S545 545 aa8.19□□□□□ -1.1
NUP85-213ENST00000579838 CECR2Q9BXF3 1484 aa8.1□□□□□ -1.11
NUP85-213ENST00000579838 RSF1Q96T23 1441 aaPredicted RBP8.09□□□□□ -1.11
NUP85-213ENST00000579838 MROH2BQ7Z745 1585 aa8.07□□□□□ -1.12
NUP85-213ENST00000579838 WIZO95785 1651 aa8.07□□□□□ -1.12
NUP85-213ENST00000579838 BICRAQ9NZM4 1560 aa8.06□□□□□ -1.12
NUP85-213ENST00000579838 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
NUP85-213ENST00000579838 SMARCA4P51532 1647 aa8□□□□□ -1.13
NUP85-213ENST00000579838 EIF4G1Q04637 1599 aaKnown RBP7.96□□□□□ -1.14
NUP85-213ENST00000579838 TOP2AP11388 1531 aaKnown RBP7.91□□□□□ -1.14
NUP85-213ENST00000579838 PIAS4Q8N2W9 510 aaPredicted RBP7.9□□□□□ -1.14
NUP85-213ENST00000579838 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.156e-11■■■□□ 15.6
NUP85-213ENST00000579838 SMARCA2P51531 1590 aa7.88□□□□□ -1.15
NUP85-213ENST00000579838 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
NUP85-213ENST00000579838 CCDC88BA6NC98 1476 aa7.81□□□□□ -1.16
NUP85-213ENST00000579838 ABCC8Q09428 1581 aa7.78□□□□□ -1.16
NUP85-213ENST00000579838 ATAD2BQ9ULI0 1458 aa7.76□□□□□ -1.17
NUP85-213ENST00000579838 LOC105371045A0A1W2PR82 267 aa7.73□□□□□ -1.17
NUP85-213ENST00000579838 BAZ1BQ9UIG0 1483 aaKnown RBP7.71□□□□□ -1.18
NUP85-213ENST00000579838 TRIM41Q8WV44 630 aa7.69□□□□□ -1.18
NUP85-213ENST00000579838 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
NUP85-213ENST00000579838 SYNJ1O43426 1573 aa7.67□□□□□ -1.18
NUP85-213ENST00000579838 PRDM2Q13029 1718 aa7.65□□□□□ -1.18
NUP85-213ENST00000579838 FAM9AQ8IZU1 332 aaPredicted RBP7.65□□□□□ -1.18
NUP85-213ENST00000579838 NCAPD3P42695 1498 aa7.62□□□□□ -1.19
NUP85-213ENST00000579838 CC2D2AQ9P2K1 1620 aa7.62□□□□□ -1.19
NUP85-213ENST00000579838 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
NUP85-213ENST00000579838 BIVM-ERCC5R4GMW8 1640 aa7.61□□□□□ -1.19
NUP85-213ENST00000579838 SOGA1O94964 1423 aa7.6□□□□□ -1.19
NUP85-213ENST00000579838 WRNQ14191 1432 aaPredicted RBP eCLIP7.58□□□□□ -1.2
NUP85-213ENST00000579838 TOP2BQ02880 1626 aa7.57□□□□□ -1.2
NUP85-213ENST00000579838 EHMT2Q96KQ7 1210 aa7.57□□□□□ -1.2
NUP85-213ENST00000579838 CUX1P39880 1505 aa7.54□□□□□ -1.2
NUP85-213ENST00000579838 CFTRP13569 1480 aa7.52□□□□□ -1.21
NUP85-213ENST00000579838 KIF21BO75037 1637 aa7.52□□□□□ -1.21
NUP85-213ENST00000579838 EEA1Q15075 1411 aa7.48□□□□□ -1.21
NUP85-213ENST00000579838 PCGF6Q9BYE7 350 aa7.47□□□□□ -1.21
NUP85-213ENST00000579838 GOLGA3Q08378 1498 aa7.46□□□□□ -1.22
NUP85-213ENST00000579838 CEP162Q5TB80 1403 aa7.45□□□□□ -1.22
NUP85-213ENST00000579838 NESP48681 1621 aa7.45□□□□□ -1.22
NUP85-213ENST00000579838 CSRNP3Q8WYN3 585 aa7.43□□□□□ -1.22
NUP85-213ENST00000579838 KIF21AQ7Z4S6 1674 aa7.43□□□□□ -1.22
NUP85-213ENST00000579838 TNIKQ9UKE5 1360 aa7.43□□□□□ -1.22
NUP85-213ENST00000579838 CEP164Q9UPV0 1460 aa7.43□□□□□ -1.22
NUP85-213ENST00000579838 RAPGEF2Q9Y4G8 1499 aa7.43□□□□□ -1.22
NUP85-213ENST00000579838 CADPSQ9ULU8 1353 aa7.42□□□□□ -1.22
NUP85-213ENST00000579838 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
NUP85-213ENST00000579838 RNF39Q9H2S5 420 aa7.4□□□□□ -1.22
NUP85-213ENST00000579838 DNAJC5BQ9UF47 199 aa7.4□□□□□ -1.22
NUP85-213ENST00000579838 FGD5Q6ZNL6 1462 aa7.4□□□□□ -1.22
NUP85-213ENST00000579838 FANCD2Q9BXW9 1451 aa7.4□□□□□ -1.22
NUP85-213ENST00000579838 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
NUP85-213ENST00000579838 ERICH3Q5RHP9 1530 aa7.39□□□□□ -1.23
NUP85-213ENST00000579838 HRCP23327 699 aa7.39□□□□□ -1.23
NUP85-213ENST00000579838 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
NUP85-213ENST00000579838 PPARGC1BQ86YN6 1023 aaKnown RBP7.39□□□□□ -1.23
NUP85-213ENST00000579838 LAMC3Q9Y6N6 1575 aa7.38□□□□□ -1.23
NUP85-213ENST00000579838 PRXQ9BXM0 1461 aa7.38□□□□□ -1.23
NUP85-213ENST00000579838 URB2Q14146 1524 aaKnown RBP7.36□□□□□ -1.23
NUP85-213ENST00000579838 TOPBP1Q92547 1522 aa7.36□□□□□ -1.23
NUP85-213ENST00000579838 UBTFP17480 764 aaKnown RBP7.34□□□□□ -1.23
NUP85-213ENST00000579838 CUX2O14529 1486 aa7.34□□□□□ -1.23
NUP85-213ENST00000579838 ARAP1Q96P48 1450 aa7.34□□□□□ -1.23
NUP85-213ENST00000579838 RAD54L2Q9Y4B4 1467 aa7.34□□□□□ -1.23
NUP85-213ENST00000579838 POLA1P09884 1462 aaPredicted RBP7.33□□□□□ -1.24
NUP85-213ENST00000579838 CLIP1P30622 1438 aa7.33□□□□□ -1.24
NUP85-213ENST00000579838 KIF27Q86VH2 1401 aa7.33□□□□□ -1.24
NUP85-213ENST00000579838 ABCA5Q8WWZ7 1642 aa7.32□□□□□ -1.24
NUP85-213ENST00000579838 CTTNBP2Q8WZ74 1663 aa7.31□□□□□ -1.24
NUP85-213ENST00000579838 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
NUP85-213ENST00000579838 TARBP1Q13395 1621 aaKnown RBP7.3□□□□□ -1.24
NUP85-213ENST00000579838 PBRM1Q86U86 1689 aa7.29□□□□□ -1.24
NUP85-213ENST00000579838 VPS8Q8N3P4 1428 aa7.29□□□□□ -1.24
NUP85-213ENST00000579838 CUL7Q14999 1698 aa7.28□□□□□ -1.24
NUP85-213ENST00000579838 TTBK1Q5TCY1 1321 aaPredicted RBP7.28□□□□□ -1.24
NUP85-213ENST00000579838 IGF1RP08069 1367 aa7.28□□□□□ -1.24
NUP85-213ENST00000579838 ARHGAP35Q9NRY4 1499 aa7.27□□□□□ -1.25
NUP85-213ENST00000579838 RANGAP1P46060 587 aaPredicted RBP7.26□□□□□ -1.25
NUP85-213ENST00000579838 LRRIQ1Q96JM4 1722 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms