RNA–Protein interactions for RNA: ENST00000470501.5

LCN12-205, Transcript of lipocalin 12, humanhuman

TSL 2

Gene LCN12, Length 1,804 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN12-205ENST00000470501 NISCHQ9Y2I1 1504 aa41.88■■■■■ 4.29
LCN12-205ENST00000470501 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
LCN12-205ENST00000470501 ZCCHC6Q5VYS8 1495 aaKnown RBP35.21■■■■□ 3.23
LCN12-205ENST00000470501 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
LCN12-205ENST00000470501 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
LCN12-205ENST00000470501 ABCC9O60706 1549 aa34.42■■■■□ 3.1
LCN12-205ENST00000470501 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
LCN12-205ENST00000470501 SHROOM4Q9ULL8 1493 aa34.17■■■■□ 3.06
LCN12-205ENST00000470501 NACADO15069 1562 aa33.94■■■■□ 3.02
LCN12-205ENST00000470501 RB1CC1Q8TDY2 1594 aa33.62■■■□□ 2.97
LCN12-205ENST00000470501 SCRIBQ14160 1630 aa33.55■■■□□ 2.96
LCN12-205ENST00000470501 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
LCN12-205ENST00000470501 SUPT5HO00267 1087 aaKnown RBP32.88■■■□□ 2.85
LCN12-205ENST00000470501 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
LCN12-205ENST00000470501 CECR2Q9BXF3 1484 aa32.56■■■□□ 2.8
LCN12-205ENST00000470501 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
LCN12-205ENST00000470501 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
LCN12-205ENST00000470501 MROH2BQ7Z745 1585 aa32.37■■■□□ 2.77
LCN12-205ENST00000470501 BAZ1AQ9NRL2 1556 aaPredicted RBP32.31■■■□□ 2.76
LCN12-205ENST00000470501 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
LCN12-205ENST00000470501 WIZO95785 1651 aa32.1■■■□□ 2.73
LCN12-205ENST00000470501 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
LCN12-205ENST00000470501 TOP2AP11388 1531 aaKnown RBP31.76■■■□□ 2.68
LCN12-205ENST00000470501 EIF4G1Q04637 1599 aaKnown RBP31.65■■■□□ 2.66
LCN12-205ENST00000470501 ATAD2BQ9ULI0 1458 aa31.63■■■□□ 2.65
LCN12-205ENST00000470501 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
LCN12-205ENST00000470501 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
LCN12-205ENST00000470501 CCDC88BA6NC98 1476 aa31.45■■■□□ 2.62
LCN12-205ENST00000470501 BAZ1BQ9UIG0 1483 aaKnown RBP31.43■■■□□ 2.62
LCN12-205ENST00000470501 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
LCN12-205ENST00000470501 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
LCN12-205ENST00000470501 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
LCN12-205ENST00000470501 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
LCN12-205ENST00000470501 ABCC8Q09428 1581 aa30.82■■■□□ 2.52
LCN12-205ENST00000470501 CFTRP13569 1480 aa30.67■■■□□ 2.5
LCN12-205ENST00000470501 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
LCN12-205ENST00000470501 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
LCN12-205ENST00000470501 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
LCN12-205ENST00000470501 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
LCN12-205ENST00000470501 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
LCN12-205ENST00000470501 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
LCN12-205ENST00000470501 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
LCN12-205ENST00000470501 TOP2BQ02880 1626 aa30.35■■■□□ 2.45
LCN12-205ENST00000470501 BIVM-ERCC5R4GMW8 1640 aa30.32■■■□□ 2.44
LCN12-205ENST00000470501 NESP48681 1621 aa30.27■■■□□ 2.44
LCN12-205ENST00000470501 CUX1P39880 1505 aa30.26■■■□□ 2.44
LCN12-205ENST00000470501 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
LCN12-205ENST00000470501 SOGA1O94964 1423 aa30.25■■■□□ 2.43
LCN12-205ENST00000470501 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.42
LCN12-205ENST00000470501 EEA1Q15075 1411 aa30.15■■■□□ 2.42
LCN12-205ENST00000470501 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
LCN12-205ENST00000470501 PDS5BQ9NTI5 1447 aa29.99■■■□□ 2.39
LCN12-205ENST00000470501 CSRNP3Q8WYN3 585 aa29.99■■■□□ 2.39
LCN12-205ENST00000470501 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
LCN12-205ENST00000470501 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.38
LCN12-205ENST00000470501 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
LCN12-205ENST00000470501 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
LCN12-205ENST00000470501 FGD5Q6ZNL6 1462 aa29.9■■■□□ 2.38
LCN12-205ENST00000470501 TOPBP1Q92547 1522 aa29.89■■■□□ 2.38
LCN12-205ENST00000470501 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
LCN12-205ENST00000470501 KIF21BO75037 1637 aa29.8■■■□□ 2.36
LCN12-205ENST00000470501 KIF27Q86VH2 1401 aa29.78■■■□□ 2.36
LCN12-205ENST00000470501 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
LCN12-205ENST00000470501 GOLGA3Q08378 1498 aa29.75■■■□□ 2.35
LCN12-205ENST00000470501 CUX2O14529 1486 aa29.71■■■□□ 2.35
LCN12-205ENST00000470501 TNIKQ9UKE5 1360 aa29.68■■■□□ 2.34
LCN12-205ENST00000470501 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
LCN12-205ENST00000470501 PRXQ9BXM0 1461 aa29.65■■■□□ 2.34
LCN12-205ENST00000470501 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
LCN12-205ENST00000470501 RAPGEF2Q9Y4G8 1499 aa29.63■■■□□ 2.33
LCN12-205ENST00000470501 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
LCN12-205ENST00000470501 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
LCN12-205ENST00000470501 WDR97A6NE52 1622 aa29.57■■■□□ 2.32
LCN12-205ENST00000470501 UBTFP17480 764 aaKnown RBP29.57■■■□□ 2.32
LCN12-205ENST00000470501 IGF1RP08069 1367 aa29.54■■■□□ 2.32
LCN12-205ENST00000470501 CEP162Q5TB80 1403 aa29.54■■■□□ 2.32
LCN12-205ENST00000470501 WDR62O43379 1518 aa29.49■■■□□ 2.31
LCN12-205ENST00000470501 TARBP1Q13395 1621 aaKnown RBP29.47■■■□□ 2.31
LCN12-205ENST00000470501 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
LCN12-205ENST00000470501 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
LCN12-205ENST00000470501 THOC2Q8NI27 1593 aaKnown RBP29.4■■■□□ 2.3
LCN12-205ENST00000470501 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
LCN12-205ENST00000470501 TDRD9Q8NDG6 1382 aaKnown RBP29.35■■■□□ 2.29
LCN12-205ENST00000470501 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
LCN12-205ENST00000470501 CUL7Q14999 1698 aa29.3■■■□□ 2.28
LCN12-205ENST00000470501 CLIP1P30622 1438 aa29.29■■■□□ 2.28
LCN12-205ENST00000470501 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
LCN12-205ENST00000470501 PBRM1Q86U86 1689 aa29.16■■■□□ 2.26
LCN12-205ENST00000470501 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.26
LCN12-205ENST00000470501 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.26
LCN12-205ENST00000470501 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
LCN12-205ENST00000470501 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
LCN12-205ENST00000470501 VPS8Q8N3P4 1428 aa29.04■■■□□ 2.24
LCN12-205ENST00000470501 EIF4G3O43432 1585 aaKnown RBP29.04■■■□□ 2.24
LCN12-205ENST00000470501 ARAP1Q96P48 1450 aa29.03■■■□□ 2.24
LCN12-205ENST00000470501 ADAMTS12P58397 1594 aa29.02■■■□□ 2.24
LCN12-205ENST00000470501 ARHGAP35Q9NRY4 1499 aa29.01■■■□□ 2.23
LCN12-205ENST00000470501 CTTNBP2Q8WZ74 1663 aa28.99■■■□□ 2.23
LCN12-205ENST00000470501 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
LCN12-205ENST00000470501 PCGF6Q9BYE7 350 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms