RNA–Protein interactions for RNA: ENST00000580627.1

GPS1-211, Transcript of G protein pathway suppressor 1, humanhuman

TSL 4

Gene GPS1, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-211ENST00000580627 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
GPS1-211ENST00000580627 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
GPS1-211ENST00000580627 ABCC9O60706 1549 aa31.21■■■□□ 2.59
GPS1-211ENST00000580627 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
GPS1-211ENST00000580627 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
GPS1-211ENST00000580627 NACADO15069 1562 aa29.77■■■□□ 2.36
GPS1-211ENST00000580627 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
GPS1-211ENST00000580627 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
GPS1-211ENST00000580627 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
GPS1-211ENST00000580627 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.252e-6■□□□□ 11.3
GPS1-211ENST00000580627 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
GPS1-211ENST00000580627 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
GPS1-211ENST00000580627 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
GPS1-211ENST00000580627 SCRIBQ14160 1630 aa28.74■■■□□ 2.19
GPS1-211ENST00000580627 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
GPS1-211ENST00000580627 EIF4G1Q04637 1599 aaKnown RBP28.23■■■□□ 2.11
GPS1-211ENST00000580627 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
GPS1-211ENST00000580627 CECR2Q9BXF3 1484 aa28.1■■■□□ 2.09
GPS1-211ENST00000580627 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
GPS1-211ENST00000580627 SMARCA4P51532 1647 aa27.46■■□□□ 1.99
GPS1-211ENST00000580627 BAZ1AQ9NRL2 1556 aaPredicted RBP27.41■■□□□ 1.98
GPS1-211ENST00000580627 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
GPS1-211ENST00000580627 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
GPS1-211ENST00000580627 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
GPS1-211ENST00000580627 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
GPS1-211ENST00000580627 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
GPS1-211ENST00000580627 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
GPS1-211ENST00000580627 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
GPS1-211ENST00000580627 WIZO95785 1651 aa26.88■■□□□ 1.89
GPS1-211ENST00000580627 NESP48681 1621 aa26.87■■□□□ 1.89
GPS1-211ENST00000580627 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
GPS1-211ENST00000580627 CUX2O14529 1486 aa26.8■■□□□ 1.88
GPS1-211ENST00000580627 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
GPS1-211ENST00000580627 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
GPS1-211ENST00000580627 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
GPS1-211ENST00000580627 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
GPS1-211ENST00000580627 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
GPS1-211ENST00000580627 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
GPS1-211ENST00000580627 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
GPS1-211ENST00000580627 CFTRP13569 1480 aa26.42■■□□□ 1.82
GPS1-211ENST00000580627 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
GPS1-211ENST00000580627 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
GPS1-211ENST00000580627 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
GPS1-211ENST00000580627 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
GPS1-211ENST00000580627 WDR62O43379 1518 aa26.29■■□□□ 1.8
GPS1-211ENST00000580627 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
GPS1-211ENST00000580627 PRDM2Q13029 1718 aa26.14■■□□□ 1.78
GPS1-211ENST00000580627 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
GPS1-211ENST00000580627 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
GPS1-211ENST00000580627 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
GPS1-211ENST00000580627 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
GPS1-211ENST00000580627 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
GPS1-211ENST00000580627 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
GPS1-211ENST00000580627 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
GPS1-211ENST00000580627 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
GPS1-211ENST00000580627 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
GPS1-211ENST00000580627 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
GPS1-211ENST00000580627 SOGA1O94964 1423 aa25.56■■□□□ 1.68
GPS1-211ENST00000580627 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
GPS1-211ENST00000580627 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
GPS1-211ENST00000580627 CUX1P39880 1505 aa25.53■■□□□ 1.68
GPS1-211ENST00000580627 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
GPS1-211ENST00000580627 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
GPS1-211ENST00000580627 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
GPS1-211ENST00000580627 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
GPS1-211ENST00000580627 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
GPS1-211ENST00000580627 FBLN2P98095 1184 aa25.37■■□□□ 1.65
GPS1-211ENST00000580627 CHD1O14646 1710 aa25.31■■□□□ 1.64
GPS1-211ENST00000580627 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
GPS1-211ENST00000580627 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
GPS1-211ENST00000580627 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
GPS1-211ENST00000580627 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
GPS1-211ENST00000580627 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
GPS1-211ENST00000580627 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
GPS1-211ENST00000580627 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
GPS1-211ENST00000580627 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
GPS1-211ENST00000580627 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
GPS1-211ENST00000580627 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
GPS1-211ENST00000580627 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
GPS1-211ENST00000580627 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
GPS1-211ENST00000580627 ARHGEF11O15085 1522 aa25.18■■□□□ 1.62
GPS1-211ENST00000580627 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
GPS1-211ENST00000580627 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
GPS1-211ENST00000580627 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
GPS1-211ENST00000580627 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
GPS1-211ENST00000580627 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
GPS1-211ENST00000580627 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
GPS1-211ENST00000580627 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
GPS1-211ENST00000580627 ADAMTS12P58397 1594 aa24.95■■□□□ 1.58
GPS1-211ENST00000580627 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
GPS1-211ENST00000580627 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
GPS1-211ENST00000580627 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
GPS1-211ENST00000580627 NUP160Q12769 1436 aa24.84■■□□□ 1.57
GPS1-211ENST00000580627 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
GPS1-211ENST00000580627 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
GPS1-211ENST00000580627 IGF1RP08069 1367 aa24.71■■□□□ 1.55
GPS1-211ENST00000580627 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
GPS1-211ENST00000580627 SHROOM2Q13796 1616 aa24.67■■□□□ 1.54
GPS1-211ENST00000580627 CUL7Q14999 1698 aa24.66■■□□□ 1.54
GPS1-211ENST00000580627 JPH4Q96JJ6 628 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms