RNA–Protein interactions for RNA: ENST00000405308.6

MDK-205, Transcript of midkine, humanhuman

APPRIS P2 TSL 2 BASIC

Gene MDK, Length 1,166 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-205ENST00000405308 NISCHQ9Y2I1 1504 aa50.21■■■■■ 5.63
MDK-205ENST00000405308 ABCC9O60706 1549 aa45.97■■■■■ 4.95
MDK-205ENST00000405308 CCDC180Q9P1Z9 1646 aa45.27■■■■■ 4.84
MDK-205ENST00000405308 DNAJC5BQ9UF47 199 aa43.91■■■■■ 4.62
MDK-205ENST00000405308 RB1CC1Q8TDY2 1594 aa43.46■■■■■ 4.55
MDK-205ENST00000405308 NACADO15069 1562 aa43.03■■■■■ 4.48
MDK-205ENST00000405308 PABPN1Q86U42 306 aaKnown RBP eCLIP42.73■■■■■ 4.43
MDK-205ENST00000405308 DCAF8L2P0C7V8 631 aa42.57■■■■■ 4.41
MDK-205ENST00000405308 UNC13AQ9UPW8 1703 aa42.4■■■■■ 4.38
MDK-205ENST00000405308 MYO15BQ96JP2 1530 aa42.3■■■■■ 4.36
MDK-205ENST00000405308 BICRAQ9NZM4 1560 aa42.28■■■■■ 4.36
MDK-205ENST00000405308 SHROOM4Q9ULL8 1493 aa41.66■■■■■ 4.26
MDK-205ENST00000405308 CECR2Q9BXF3 1484 aa41.53■■■■■ 4.24
MDK-205ENST00000405308 CC2D2AQ9P2K1 1620 aa41.5■■■■■ 4.23
MDK-205ENST00000405308 DCAF1Q9Y4B6 1507 aa41.49■■■■■ 4.23
MDK-205ENST00000405308 ZCCHC6Q5VYS8 1495 aaKnown RBP41.44■■■■■ 4.22
MDK-205ENST00000405308 EIF4G1Q04637 1599 aaKnown RBP41.26■■■■■ 4.2
MDK-205ENST00000405308 SCRIBQ14160 1630 aa41.15■■■■■ 4.18
MDK-205ENST00000405308 DNAJC5Q9H3Z4 198 aa40.84■■■■■ 4.13
MDK-205ENST00000405308 CUX2O14529 1486 aa39.97■■■■□ 3.99
MDK-205ENST00000405308 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
MDK-205ENST00000405308 ERCC6Q03468 1493 aa39.71■■■■□ 3.95
MDK-205ENST00000405308 ATAD2BQ9ULI0 1458 aa39.55■■■■□ 3.92
MDK-205ENST00000405308 HMGXB3Q12766 1538 aa39.37■■■■□ 3.89
MDK-205ENST00000405308 SMARCA2P51531 1590 aa39.34■■■■□ 3.89
MDK-205ENST00000405308 NESP48681 1621 aa39.31■■■■□ 3.88
MDK-205ENST00000405308 SMARCA4P51532 1647 aa39.25■■■■□ 3.87
MDK-205ENST00000405308 BAZ1BQ9UIG0 1483 aaKnown RBP39.05■■■■□ 3.84
MDK-205ENST00000405308 THOC2Q8NI27 1593 aaKnown RBP39.03■■■■□ 3.84
MDK-205ENST00000405308 BAZ1AQ9NRL2 1556 aaPredicted RBP38.97■■■■□ 3.83
MDK-205ENST00000405308 PEG3Q9GZU2 1588 aa38.96■■■■□ 3.83
MDK-205ENST00000405308 LAMC3Q9Y6N6 1575 aa38.93■■■■□ 3.82
MDK-205ENST00000405308 PDS5BQ9NTI5 1447 aa38.77■■■■□ 3.8
MDK-205ENST00000405308 KIF21AQ7Z4S6 1674 aa38.69■■■■□ 3.78
MDK-205ENST00000405308 MROH2BQ7Z745 1585 aa38.65■■■■□ 3.78
MDK-205ENST00000405308 TRIM41Q8WV44 630 aa38.58■■■■□ 3.77
MDK-205ENST00000405308 CADPSQ9ULU8 1353 aa38.55■■■■□ 3.76
MDK-205ENST00000405308 MRC2Q9UBG0 1479 aa38.44■■■■□ 3.74
MDK-205ENST00000405308 WDR62O43379 1518 aa38.38■■■■□ 3.74
MDK-205ENST00000405308 CEP164Q9UPV0 1460 aa38.12■■■■□ 3.69
MDK-205ENST00000405308 WIZO95785 1651 aa38.08■■■■□ 3.69
MDK-205ENST00000405308 OSCARQ8IYS5 282 aa38.06■■■■□ 3.68
MDK-205ENST00000405308 FANCD2Q9BXW9 1451 aa38.04■■■■□ 3.68
MDK-205ENST00000405308 CFTRP13569 1480 aa37.96■■■■□ 3.67
MDK-205ENST00000405308 URB2Q14146 1524 aaKnown RBP37.79■■■■□ 3.64
MDK-205ENST00000405308 RSF1Q96T23 1441 aaPredicted RBP37.64■■■■□ 3.62
MDK-205ENST00000405308 TOP2AP11388 1531 aaKnown RBP37.59■■■■□ 3.61
MDK-205ENST00000405308 RIMBP3CA6NJZ7 1639 aa37.54■■■■□ 3.6
MDK-205ENST00000405308 RIMBP3BA6NNM3 1639 aa37.54■■■■□ 3.6
MDK-205ENST00000405308 RIMBP3Q9UFD9 1639 aa37.54■■■■□ 3.6
MDK-205ENST00000405308 ZNF608Q9ULD9 1512 aaPredicted RBP37.44■■■■□ 3.58
MDK-205ENST00000405308 IFT140Q96RY7 1462 aa37.43■■■■□ 3.58
MDK-205ENST00000405308 ARHGEF11O15085 1522 aa37.39■■■■□ 3.58
MDK-205ENST00000405308 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
MDK-205ENST00000405308 TOPBP1Q92547 1522 aa37.25■■■■□ 3.55
MDK-205ENST00000405308 CCDC88BA6NC98 1476 aa37.23■■■■□ 3.55
MDK-205ENST00000405308 CYB5RLQ6IPT4 315 aa37.18■■■■□ 3.54
MDK-205ENST00000405308 ABCC8Q09428 1581 aa37.14■■■■□ 3.54
MDK-205ENST00000405308 EIF4G3O43432 1585 aaKnown RBP37.12■■■■□ 3.53
MDK-205ENST00000405308 DNMBPQ6XZF7 1577 aa37.02■■■■□ 3.52
MDK-205ENST00000405308 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.521e-9■■■■■ 32.7
MDK-205ENST00000405308 ARAP1Q96P48 1450 aa36.99■■■■□ 3.51
MDK-205ENST00000405308 TARBP1Q13395 1621 aaKnown RBP36.98■■■■□ 3.51
MDK-205ENST00000405308 CHD1O14646 1710 aa36.93■■■■□ 3.5
MDK-205ENST00000405308 TRHP20396 242 aaPredicted RBP36.92■■■■□ 3.5
MDK-205ENST00000405308 FBLN2P98095 1184 aa36.84■■■■□ 3.49
MDK-205ENST00000405308 POLA1P09884 1462 aaPredicted RBP36.83■■■■□ 3.49
MDK-205ENST00000405308 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
MDK-205ENST00000405308 TDRD9Q8NDG6 1382 aaKnown RBP36.67■■■■□ 3.46
MDK-205ENST00000405308 SOGA1O94964 1423 aa36.66■■■■□ 3.46
MDK-205ENST00000405308 CLASP1Q7Z460 1538 aa36.61■■■■□ 3.45
MDK-205ENST00000405308 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
MDK-205ENST00000405308 WDR97A6NE52 1622 aa36.55■■■■□ 3.44
MDK-205ENST00000405308 CHMP7Q8WUX9 453 aaPredicted RBP36.52■■■■□ 3.44
MDK-205ENST00000405308 MAGI1Q96QZ7 1491 aaPredicted RBP36.49■■■■□ 3.43
MDK-205ENST00000405308 SYNJ1O43426 1573 aa36.46■■■■□ 3.43
MDK-205ENST00000405308 FGD5Q6ZNL6 1462 aa36.46■■■■□ 3.43
MDK-205ENST00000405308 GRIN2BQ13224 1484 aa36.41■■■■□ 3.42
MDK-205ENST00000405308 SYNJ2O15056 1496 aa36.38■■■■□ 3.41
MDK-205ENST00000405308 CUX1P39880 1505 aa36.35■■■■□ 3.41
MDK-205ENST00000405308 AEBP2Q6ZN18 517 aaPredicted RBP36.34■■■■□ 3.41
MDK-205ENST00000405308 GAPVD1Q14C86 1478 aa36.26■■■■□ 3.4
MDK-205ENST00000405308 PBRM1Q86U86 1689 aa36.09■■■■□ 3.37
MDK-205ENST00000405308 ABCA10Q8WWZ4 1543 aa36.07■■■■□ 3.36
MDK-205ENST00000405308 ABCA5Q8WWZ7 1642 aa36.01■■■■□ 3.36
MDK-205ENST00000405308 ERCC6L2Q5T890 1561 aa35.96■■■■□ 3.35
MDK-205ENST00000405308 GRIN2AQ12879 1464 aa35.93■■■■□ 3.34
MDK-205ENST00000405308 NUP160Q12769 1436 aa35.9■■■■□ 3.34
MDK-205ENST00000405308 CEP170Q5SW79 1584 aa35.85■■■■□ 3.33
MDK-205ENST00000405308 WRNQ14191 1432 aaPredicted RBP eCLIP35.78■■■■□ 3.32
MDK-205ENST00000405308 ADAMTS12P58397 1594 aa35.77■■■■□ 3.32
MDK-205ENST00000405308 SHROOM2Q13796 1616 aa35.76■■■■□ 3.32
MDK-205ENST00000405308 FHAD1B1AJZ9 1412 aa35.72■■■■□ 3.31
MDK-205ENST00000405308 KIF13AQ9H1H9 1805 aa35.61■■■■□ 3.29
MDK-205ENST00000405308 ERICH3Q5RHP9 1530 aa35.58■■■■□ 3.29
MDK-205ENST00000405308 TOP2BQ02880 1626 aa35.56■■■■□ 3.28
MDK-205ENST00000405308 PRG4Q92954 1404 aaPredicted RBP35.56■■■■□ 3.28
MDK-205ENST00000405308 JPH4Q96JJ6 628 aa35.54■■■■□ 3.28
MDK-205ENST00000405308 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
MDK-205ENST00000405308 ABCC10Q5T3U5 1492 aa35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms