Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.661e-6■□□□□ 8.2
SMNDC1O75940 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25■■□□□ 1.591e-6■□□□□ 8.2
SMNDC1O75940 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.571e-6■□□□□ 8.2
SMNDC1O75940 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.57■■□□□ 1.521e-6■□□□□ 8.2
SMNDC1O75940 D2HGDH-212ENST00000468064 2298 ntTSL 1 (best)24■■□□□ 1.431e-6■□□□□ 8.2
SMNDC1O75940 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.97■■□□□ 1.271e-6■□□□□ 8.2
SMNDC1O75940 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.97■■□□□ 1.271e-6■□□□□ 8.2
SMNDC1O75940 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.64■■□□□ 1.221e-6■□□□□ 8.2
SMNDC1O75940 FASTK-216ENST00000496663 818 ntTSL 219.76■□□□□ 0.751e-6■□□□□ 8.2
SMNDC1O75940 FASTK-205ENST00000461979 720 ntTSL 519.13■□□□□ 0.651e-6■□□□□ 8.2
SMNDC1O75940 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.75■□□□□ 0.591e-6■□□□□ 8.2
SMNDC1O75940 MAZ-207ENST00000563012 646 ntTSL 317.87■□□□□ 0.451e-6■□□□□ 8.2
SMNDC1O75940 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.86■□□□□ 0.451e-6■□□□□ 8.2
SMNDC1O75940 D2HGDH-208ENST00000445308 955 ntTSL 217.51■□□□□ 0.391e-6■□□□□ 8.2
SMNDC1O75940 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.34■□□□□ 0.211e-6■□□□□ 8.2
SMNDC1O75940 MAZ-209ENST00000565777 1313 ntTSL 214.79□□□□□ -0.041e-6■□□□□ 8.2
SMNDC1O75940 MAZ-213ENST00000568411 599 ntTSL 313.94□□□□□ -0.181e-6■□□□□ 8.2
SMNDC1O75940 MAZ-204ENST00000561855 672 ntTSL 513.85□□□□□ -0.191e-6■□□□□ 8.2
SMNDC1O75940 RPL10-212ENST00000479366 569 ntTSL 411.9□□□□□ -0.51e-6■□□□□ 8.2
SMNDC1O75940 MAZ-206ENST00000562557 475 ntTSL 311.66□□□□□ -0.541e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-228ENST00000557033 760 ntTSL 310.65□□□□□ -0.71e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-231ENST00000557336 580 ntTSL 310.04□□□□□ -0.81e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-213ENST00000554891 644 ntTSL 59.54□□□□□ -0.881e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-209ENST00000554383 1039 ntTSL 59.09□□□□□ -0.951e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-218ENST00000555215 781 ntTSL 59.09□□□□□ -0.951e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-224ENST00000556226 629 ntTSL 58.78□□□□□ -11e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-216ENST00000555137 789 ntTSL 38.72□□□□□ -1.011e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-207ENST00000553614 604 ntTSL 58.2□□□□□ -1.11e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-233ENST00000557768 599 ntTSL 37.56□□□□□ -1.21e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-215ENST00000555127 929 ntTSL 26.31□□□□□ -1.41e-6■□□□□ 8.2
SMNDC1O75940 HNRNPC-217ENST00000555176 531 ntTSL 53.66□□□□□ -1.821e-6■□□□□ 8.2
SMNDC1O75940 HNRNPH1-237ENST00000520415 620 ntTSL 311.34□□□□□ -0.598e-16■□□□□ 8.2
SMNDC1O75940 HSP90AA1-208ENST00000557234 584 ntTSL 316.41■□□□□ 0.221e-8■□□□□ 8.2
SMNDC1O75940 HSP90AA1-206ENST00000556554 552 ntTSL 29.24□□□□□ -0.931e-8■□□□□ 8.2
SMNDC1O75940 ATP5B-208ENST00000551182 457 ntTSL 26.13□□□□□ -1.432e-12■□□□□ 8.2
SMNDC1O75940 UBXN1-215ENST00000533476 1912 ntTSL 219.5■□□□□ 0.713e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-206ENST00000525717 1257 ntTSL 318.97■□□□□ 0.633e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-213ENST00000532904 2073 ntTSL 218.87■□□□□ 0.613e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-204ENST00000524762 763 ntTSL 316.99■□□□□ 0.313e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-208ENST00000527421 1085 ntTSL 516.75■□□□□ 0.273e-7■□□□□ 8.2
SMNDC1O75940 BRD2-209ENST00000469132 1628 ntTSL 216.06■□□□□ 0.163e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.043e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-207ENST00000526919 759 ntTSL 314.56□□□□□ -0.083e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.97□□□□□ -0.173e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-217ENST00000534176 943 ntTSL 313.87□□□□□ -0.193e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.293e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.18□□□□□ -0.33e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.51□□□□□ -0.413e-7■□□□□ 8.2
SMNDC1O75940 UBXN1-205ENST00000525004 482 ntTSL 312.35□□□□□ -0.433e-7■□□□□ 8.2
SMNDC1O75940 BRD2-211ENST00000482838 759 ntTSL 25.58□□□□□ -1.523e-7■□□□□ 8.2
SMNDC1O75940 MT-TG-201ENST00000387429 68 ntBASIC5.69□□□□□ -1.51e-323■□□□□ 8.2
SMNDC1O75940 GREB1-207ENST00000432985 2052 ntTSL 1 (best)13.04□□□□□ -0.321e-10■□□□□ 8.1
SMNDC1O75940 TRAPPC8-213ENST00000584876 715 ntTSL 520.8■□□□□ 0.923e-7■□□□□ 8.1
SMNDC1O75940 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.98■□□□□ 0.313e-7■□□□□ 8.1
SMNDC1O75940 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.023e-7■□□□□ 8.1
SMNDC1O75940 TRAPPC8-207ENST00000580104 5014 ntTSL 214.03□□□□□ -0.163e-7■□□□□ 8.1
SMNDC1O75940 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.77□□□□□ -0.213e-7■□□□□ 8.1
SMNDC1O75940 KPNB1-205ENST00000577918 859 ntTSL 313.44□□□□□ -0.263e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC11.92□□□□□ -0.53e-7■□□□□ 8.1
SMNDC1O75940 AFDN-215ENST00000497596 728 ntTSL 211.25□□□□□ -0.613e-7■□□□□ 8.1
SMNDC1O75940 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.733e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC10.34□□□□□ -0.753e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC10.34□□□□□ -0.753e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC10.08□□□□□ -0.83e-7■□□□□ 8.1
SMNDC1O75940 TRAPPC8-211ENST00000582539 4391 ntTSL 1 (best) BASIC9.67□□□□□ -0.863e-7■□□□□ 8.1
SMNDC1O75940 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC9.31□□□□□ -0.923e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-225ENST00000508476 601 ntTSL 39.07□□□□□ -0.963e-7■□□□□ 8.1
SMNDC1O75940 PRRC2A-213ENST00000487839 1071 ntTSL 58.83□□□□□ -13e-7■□□□□ 8.1
SMNDC1O75940 KPNB1-211ENST00000582097 2347 ntTSL 28.65□□□□□ -1.023e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC8.18□□□□□ -1.13e-7■□□□□ 8.1
SMNDC1O75940 PRRC2A-212ENST00000487089 732 ntTSL 27.82□□□□□ -1.163e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-224ENST00000508474 4819 ntTSL 27.58□□□□□ -1.23e-7■□□□□ 8.1
SMNDC1O75940 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.54□□□□□ -1.23e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-230ENST00000510599 484 ntTSL 27.35□□□□□ -1.233e-7■□□□□ 8.1
SMNDC1O75940 TRAPPC8-202ENST00000577426 437 ntTSL 56.1□□□□□ -1.433e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-226ENST00000508635 587 ntTSL 45.45□□□□□ -1.543e-7■□□□□ 8.1
SMNDC1O75940 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.723e-7■□□□□ 8.1
SMNDC1O75940 ATP13A3-208ENST00000485194 586 ntTSL 58.38□□□□□ -1.075e-22■□□□□ 8.1
SMNDC1O75940 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.755e-22■□□□□ 8.1
SMNDC1O75940 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.085e-22■□□□□ 8.1
SMNDC1O75940 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.564e-12■□□□□ 8.1
SMNDC1O75940 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.314e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-209ENST00000592167 461 ntTSL 412.28□□□□□ -0.444e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-214ENST00000614600 2285 ntTSL 512.08□□□□□ -0.484e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-220ENST00000621668 2055 ntTSL 511.46□□□□□ -0.574e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-212ENST00000612035 2161 ntTSL 510.9□□□□□ -0.664e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-205ENST00000590432 554 ntTSL 410.24□□□□□ -0.774e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-216ENST00000616784 2542 ntTSL 59.32□□□□□ -0.924e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-206ENST00000590538 568 ntTSL 49.02□□□□□ -0.974e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-202ENST00000588093 334 ntTSL 38.99□□□□□ -0.974e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-210ENST00000593014 577 ntTSL 48.9□□□□□ -0.984e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.8□□□□□ -14e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-208ENST00000591610 559 ntTSL 48.65□□□□□ -1.024e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.044e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.3□□□□□ -1.084e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.17□□□□□ -1.14e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.72□□□□□ -1.174e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.284e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-219ENST00000620039 3428 ntTSL 1 (best)6.47□□□□□ -1.374e-12■□□□□ 8.1
SMNDC1O75940 AP2B1-204ENST00000589774 552 ntTSL 44.59□□□□□ -1.674e-12■□□□□ 8.1
Retrieved 100 of 11,362 protein–RNA pairs in 43.8 ms