RNA–Protein interactions for RNA: ENST00000533000.5

UBXN1-214, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-214ENST00000533000 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
UBXN1-214ENST00000533000 ABCC9O60706 1549 aa32.03■■■□□ 2.72
UBXN1-214ENST00000533000 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
UBXN1-214ENST00000533000 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
UBXN1-214ENST00000533000 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
UBXN1-214ENST00000533000 NACADO15069 1562 aa29.98■■■□□ 2.39
UBXN1-214ENST00000533000 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
UBXN1-214ENST00000533000 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
UBXN1-214ENST00000533000 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
UBXN1-214ENST00000533000 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
UBXN1-214ENST00000533000 MYO15BQ96JP2 1530 aa29.47■■■□□ 2.31
UBXN1-214ENST00000533000 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
UBXN1-214ENST00000533000 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
UBXN1-214ENST00000533000 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
UBXN1-214ENST00000533000 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
UBXN1-214ENST00000533000 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
UBXN1-214ENST00000533000 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
UBXN1-214ENST00000533000 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
UBXN1-214ENST00000533000 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
UBXN1-214ENST00000533000 NCAPD3P42695 1498 aa27.76■■■□□ 2.03
UBXN1-214ENST00000533000 CUX2O14529 1486 aa27.64■■■□□ 2.01
UBXN1-214ENST00000533000 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
UBXN1-214ENST00000533000 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
UBXN1-214ENST00000533000 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
UBXN1-214ENST00000533000 NESP48681 1621 aa27.46■■□□□ 1.99
UBXN1-214ENST00000533000 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
UBXN1-214ENST00000533000 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
UBXN1-214ENST00000533000 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
UBXN1-214ENST00000533000 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
UBXN1-214ENST00000533000 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
UBXN1-214ENST00000533000 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
UBXN1-214ENST00000533000 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
UBXN1-214ENST00000533000 LAMC3Q9Y6N6 1575 aa27.09■■□□□ 1.93
UBXN1-214ENST00000533000 KIF21AQ7Z4S6 1674 aa26.99■■□□□ 1.91
UBXN1-214ENST00000533000 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
UBXN1-214ENST00000533000 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
UBXN1-214ENST00000533000 WIZO95785 1651 aa26.79■■□□□ 1.88
UBXN1-214ENST00000533000 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
UBXN1-214ENST00000533000 WDR62O43379 1518 aa26.72■■□□□ 1.87
UBXN1-214ENST00000533000 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
UBXN1-214ENST00000533000 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
UBXN1-214ENST00000533000 FANCD2Q9BXW9 1451 aa26.58■■□□□ 1.85
UBXN1-214ENST00000533000 CFTRP13569 1480 aa26.52■■□□□ 1.84
UBXN1-214ENST00000533000 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
UBXN1-214ENST00000533000 URB2Q14146 1524 aaKnown RBP26.42■■□□□ 1.82
UBXN1-214ENST00000533000 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
UBXN1-214ENST00000533000 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
UBXN1-214ENST00000533000 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
UBXN1-214ENST00000533000 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
UBXN1-214ENST00000533000 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
UBXN1-214ENST00000533000 PRDM2Q13029 1718 aa26.08■■□□□ 1.76
UBXN1-214ENST00000533000 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
UBXN1-214ENST00000533000 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
UBXN1-214ENST00000533000 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
UBXN1-214ENST00000533000 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
UBXN1-214ENST00000533000 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
UBXN1-214ENST00000533000 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
UBXN1-214ENST00000533000 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
UBXN1-214ENST00000533000 DNMBPQ6XZF7 1577 aa25.88■■□□□ 1.73
UBXN1-214ENST00000533000 AQRO60306 1485 aaKnown RBP eCLIP25.88■■□□□ 1.731e-6■■□□□ 14.3
UBXN1-214ENST00000533000 CYB5RLQ6IPT4 315 aa25.83■■□□□ 1.73
UBXN1-214ENST00000533000 TARBP1Q13395 1621 aaKnown RBP25.83■■□□□ 1.73
UBXN1-214ENST00000533000 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
UBXN1-214ENST00000533000 CHD1O14646 1710 aa25.75■■□□□ 1.71
UBXN1-214ENST00000533000 FBLN2P98095 1184 aa25.74■■□□□ 1.71
UBXN1-214ENST00000533000 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
UBXN1-214ENST00000533000 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
UBXN1-214ENST00000533000 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
UBXN1-214ENST00000533000 SOGA1O94964 1423 aa25.65■■□□□ 1.7
UBXN1-214ENST00000533000 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
UBXN1-214ENST00000533000 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
UBXN1-214ENST00000533000 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
UBXN1-214ENST00000533000 CUX1P39880 1505 aa25.52■■□□□ 1.68
UBXN1-214ENST00000533000 CLASP1Q7Z460 1538 aa25.5■■□□□ 1.67
UBXN1-214ENST00000533000 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
UBXN1-214ENST00000533000 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
UBXN1-214ENST00000533000 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
UBXN1-214ENST00000533000 MAGI1Q96QZ7 1491 aaPredicted RBP25.43■■□□□ 1.66
UBXN1-214ENST00000533000 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
UBXN1-214ENST00000533000 SYNJ2O15056 1496 aa25.38■■□□□ 1.65
UBXN1-214ENST00000533000 GAPVD1Q14C86 1478 aa25.31■■□□□ 1.64
UBXN1-214ENST00000533000 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
UBXN1-214ENST00000533000 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
UBXN1-214ENST00000533000 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
UBXN1-214ENST00000533000 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
UBXN1-214ENST00000533000 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
UBXN1-214ENST00000533000 GRIN2AQ12879 1464 aa25.12■■□□□ 1.61
UBXN1-214ENST00000533000 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
UBXN1-214ENST00000533000 NUP160Q12769 1436 aa25.06■■□□□ 1.6
UBXN1-214ENST00000533000 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
UBXN1-214ENST00000533000 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
UBXN1-214ENST00000533000 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
UBXN1-214ENST00000533000 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
UBXN1-214ENST00000533000 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
UBXN1-214ENST00000533000 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
UBXN1-214ENST00000533000 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
UBXN1-214ENST00000533000 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.57
UBXN1-214ENST00000533000 PRG4Q92954 1404 aaPredicted RBP24.85■■□□□ 1.57
UBXN1-214ENST00000533000 JPH4Q96JJ6 628 aa24.83■■□□□ 1.57
UBXN1-214ENST00000533000 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms