RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 NISCHQ9Y2I1 1504 aa45.74■■■■■ 4.91
UBXN1-208ENST00000527421 CCDC180Q9P1Z9 1646 aa40.84■■■■■ 4.13
UBXN1-208ENST00000527421 ABCC9O60706 1549 aa40.09■■■■■ 4.01
UBXN1-208ENST00000527421 RB1CC1Q8TDY2 1594 aa38.51■■■■□ 3.76
UBXN1-208ENST00000527421 NACADO15069 1562 aa38.4■■■■□ 3.74
UBXN1-208ENST00000527421 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
UBXN1-208ENST00000527421 MYO15BQ96JP2 1530 aa38.09■■■■□ 3.69
UBXN1-208ENST00000527421 ZCCHC6Q5VYS8 1495 aaKnown RBP38.09■■■■□ 3.69
UBXN1-208ENST00000527421 DCAF1Q9Y4B6 1507 aa37.86■■■■□ 3.65
UBXN1-208ENST00000527421 UNC13AQ9UPW8 1703 aa37.66■■■■□ 3.62
UBXN1-208ENST00000527421 DNAJC5BQ9UF47 199 aa37.5■■■■□ 3.59
UBXN1-208ENST00000527421 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
UBXN1-208ENST00000527421 BICRAQ9NZM4 1560 aa37.32■■■■□ 3.56
UBXN1-208ENST00000527421 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
UBXN1-208ENST00000527421 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
UBXN1-208ENST00000527421 EIF4G1Q04637 1599 aaKnown RBP36.37■■■■□ 3.41
UBXN1-208ENST00000527421 CC2D2AQ9P2K1 1620 aa36.27■■■■□ 3.4
UBXN1-208ENST00000527421 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
UBXN1-208ENST00000527421 SMARCA4P51532 1647 aa35.57■■■■□ 3.29
UBXN1-208ENST00000527421 BAZ1AQ9NRL2 1556 aaPredicted RBP35.5■■■■□ 3.27
UBXN1-208ENST00000527421 NCAPD3P42695 1498 aa35.4■■■■□ 3.26
UBXN1-208ENST00000527421 ATAD2BQ9ULI0 1458 aa35.4■■■■□ 3.26
UBXN1-208ENST00000527421 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
UBXN1-208ENST00000527421 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
UBXN1-208ENST00000527421 MROH2BQ7Z745 1585 aa35.24■■■■□ 3.23
UBXN1-208ENST00000527421 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
UBXN1-208ENST00000527421 BAZ1BQ9UIG0 1483 aaKnown RBP35.12■■■■□ 3.21
UBXN1-208ENST00000527421 WIZO95785 1651 aa34.88■■■■□ 3.17
UBXN1-208ENST00000527421 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
UBXN1-208ENST00000527421 RSF1Q96T23 1441 aaPredicted RBP34.74■■■■□ 3.15
UBXN1-208ENST00000527421 NESP48681 1621 aa34.62■■■■□ 3.13
UBXN1-208ENST00000527421 ERCC6Q03468 1493 aa34.6■■■■□ 3.13
UBXN1-208ENST00000527421 LAMC3Q9Y6N6 1575 aa34.54■■■■□ 3.12
UBXN1-208ENST00000527421 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.12
UBXN1-208ENST00000527421 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
UBXN1-208ENST00000527421 CUX2O14529 1486 aa34.33■■■■□ 3.09
UBXN1-208ENST00000527421 PDS5BQ9NTI5 1447 aa34.29■■■■□ 3.08
UBXN1-208ENST00000527421 KIF21AQ7Z4S6 1674 aa34.27■■■■□ 3.08
UBXN1-208ENST00000527421 THOC2Q8NI27 1593 aaKnown RBP34.19■■■■□ 3.06
UBXN1-208ENST00000527421 CFTRP13569 1480 aa34.11■■■■□ 3.05
UBXN1-208ENST00000527421 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
UBXN1-208ENST00000527421 FANCD2Q9BXW9 1451 aa33.99■■■■□ 3.03
UBXN1-208ENST00000527421 CEP164Q9UPV0 1460 aa33.99■■■■□ 3.03
UBXN1-208ENST00000527421 MRC2Q9UBG0 1479 aa33.98■■■■□ 3.03
UBXN1-208ENST00000527421 PRDM2Q13029 1718 aa33.95■■■■□ 3.03
UBXN1-208ENST00000527421 WDR62O43379 1518 aa33.89■■■■□ 3.02
UBXN1-208ENST00000527421 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
UBXN1-208ENST00000527421 URB2Q14146 1524 aaKnown RBP33.65■■■□□ 2.98
UBXN1-208ENST00000527421 TOPBP1Q92547 1522 aa33.43■■■□□ 2.94
UBXN1-208ENST00000527421 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
UBXN1-208ENST00000527421 DNMBPQ6XZF7 1577 aa33.39■■■□□ 2.94
UBXN1-208ENST00000527421 IFT140Q96RY7 1462 aa33.26■■■□□ 2.92
UBXN1-208ENST00000527421 POLA1P09884 1462 aaPredicted RBP33.12■■■□□ 2.89
UBXN1-208ENST00000527421 ZNF608Q9ULD9 1512 aaPredicted RBP33.11■■■□□ 2.89
UBXN1-208ENST00000527421 CUX1P39880 1505 aa33.09■■■□□ 2.89
UBXN1-208ENST00000527421 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
UBXN1-208ENST00000527421 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
UBXN1-208ENST00000527421 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
UBXN1-208ENST00000527421 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
UBXN1-208ENST00000527421 RAD54L2Q9Y4B4 1467 aa32.96■■■□□ 2.87
UBXN1-208ENST00000527421 SOGA1O94964 1423 aa32.95■■■□□ 2.87
UBXN1-208ENST00000527421 AQRO60306 1485 aaKnown RBP eCLIP32.88■■■□□ 2.858e-8■■■■□ 24
UBXN1-208ENST00000527421 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
UBXN1-208ENST00000527421 WRNQ14191 1432 aaPredicted RBP eCLIP32.79■■■□□ 2.84
UBXN1-208ENST00000527421 BIVM-ERCC5R4GMW8 1640 aa32.78■■■□□ 2.84
UBXN1-208ENST00000527421 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
UBXN1-208ENST00000527421 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
UBXN1-208ENST00000527421 TOP2BQ02880 1626 aa32.77■■■□□ 2.84
UBXN1-208ENST00000527421 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
UBXN1-208ENST00000527421 ABCA10Q8WWZ4 1543 aa32.68■■■□□ 2.82
UBXN1-208ENST00000527421 CHD1O14646 1710 aa32.67■■■□□ 2.82
UBXN1-208ENST00000527421 GRIN2BQ13224 1484 aa32.62■■■□□ 2.81
UBXN1-208ENST00000527421 SNAPC4Q5SXM2 1469 aa32.62■■■□□ 2.81
UBXN1-208ENST00000527421 PBRM1Q86U86 1689 aa32.61■■■□□ 2.81
UBXN1-208ENST00000527421 ABCA5Q8WWZ7 1642 aa32.61■■■□□ 2.81
UBXN1-208ENST00000527421 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
UBXN1-208ENST00000527421 MAGI1Q96QZ7 1491 aaPredicted RBP32.57■■■□□ 2.8
UBXN1-208ENST00000527421 FBLN2P98095 1184 aa32.52■■■□□ 2.8
UBXN1-208ENST00000527421 SYNJ2O15056 1496 aa32.44■■■□□ 2.78
UBXN1-208ENST00000527421 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
UBXN1-208ENST00000527421 RIMBP3CA6NJZ7 1639 aa32.35■■■□□ 2.77
UBXN1-208ENST00000527421 RIMBP3BA6NNM3 1639 aa32.35■■■□□ 2.77
UBXN1-208ENST00000527421 RIMBP3Q9UFD9 1639 aa32.35■■■□□ 2.77
UBXN1-208ENST00000527421 ADAMTS12P58397 1594 aa32.32■■■□□ 2.77
UBXN1-208ENST00000527421 ARHGEF11O15085 1522 aa32.31■■■□□ 2.76
UBXN1-208ENST00000527421 ERICH3Q5RHP9 1530 aa32.3■■■□□ 2.76
UBXN1-208ENST00000527421 CLASP1Q7Z460 1538 aa32.28■■■□□ 2.76
UBXN1-208ENST00000527421 GRIN2AQ12879 1464 aa32.22■■■□□ 2.75
UBXN1-208ENST00000527421 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
UBXN1-208ENST00000527421 KIF27Q86VH2 1401 aa32.13■■■□□ 2.73
UBXN1-208ENST00000527421 NUP160Q12769 1436 aa32.07■■■□□ 2.72
UBXN1-208ENST00000527421 CEP170Q5SW79 1584 aa32.07■■■□□ 2.72
UBXN1-208ENST00000527421 ARAP1Q96P48 1450 aa32.03■■■□□ 2.72
UBXN1-208ENST00000527421 CUL7Q14999 1698 aa32.01■■■□□ 2.71
UBXN1-208ENST00000527421 IGF1RP08069 1367 aa31.96■■■□□ 2.71
UBXN1-208ENST00000527421 CYB5RLQ6IPT4 315 aa31.95■■■□□ 2.71
UBXN1-208ENST00000527421 SHROOM2Q13796 1616 aa31.88■■■□□ 2.69
UBXN1-208ENST00000527421 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
UBXN1-208ENST00000527421 CARMIL1Q5VZK9 1371 aa31.8■■■□□ 2.68
UBXN1-208ENST00000527421 ERCC6L2Q5T890 1561 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms