RNA–Protein interactions for RNA: ENST00000582097.5

KPNB1-211, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 2,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-211ENST00000582097 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
KPNB1-211ENST00000582097 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
KPNB1-211ENST00000582097 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
KPNB1-211ENST00000582097 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
KPNB1-211ENST00000582097 ABCC9O60706 1549 aa16.09■□□□□ 0.17
KPNB1-211ENST00000582097 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
KPNB1-211ENST00000582097 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
KPNB1-211ENST00000582097 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
KPNB1-211ENST00000582097 NACADO15069 1562 aa15.71■□□□□ 0.1
KPNB1-211ENST00000582097 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
KPNB1-211ENST00000582097 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
KPNB1-211ENST00000582097 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
KPNB1-211ENST00000582097 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.026e-6■■□□□ 12.8
KPNB1-211ENST00000582097 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
KPNB1-211ENST00000582097 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
KPNB1-211ENST00000582097 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
KPNB1-211ENST00000582097 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
KPNB1-211ENST00000582097 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
KPNB1-211ENST00000582097 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
KPNB1-211ENST00000582097 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
KPNB1-211ENST00000582097 WIZO95785 1651 aa14.8□□□□□ -0.04
KPNB1-211ENST00000582097 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
KPNB1-211ENST00000582097 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
KPNB1-211ENST00000582097 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
KPNB1-211ENST00000582097 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
KPNB1-211ENST00000582097 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
KPNB1-211ENST00000582097 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
KPNB1-211ENST00000582097 NCAPD3P42695 1498 aa14.52□□□□□ -0.09
KPNB1-211ENST00000582097 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
KPNB1-211ENST00000582097 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
KPNB1-211ENST00000582097 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
KPNB1-211ENST00000582097 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
KPNB1-211ENST00000582097 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
KPNB1-211ENST00000582097 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
KPNB1-211ENST00000582097 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
KPNB1-211ENST00000582097 CFTRP13569 1480 aa14.18□□□□□ -0.14
KPNB1-211ENST00000582097 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
KPNB1-211ENST00000582097 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
KPNB1-211ENST00000582097 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
KPNB1-211ENST00000582097 NESP48681 1621 aa14.1□□□□□ -0.15
KPNB1-211ENST00000582097 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
KPNB1-211ENST00000582097 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
KPNB1-211ENST00000582097 PRDM2Q13029 1718 aa14.02□□□□□ -0.17
KPNB1-211ENST00000582097 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.17
KPNB1-211ENST00000582097 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.17
KPNB1-211ENST00000582097 CUX1P39880 1505 aa13.97□□□□□ -0.17
KPNB1-211ENST00000582097 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.17
KPNB1-211ENST00000582097 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
KPNB1-211ENST00000582097 LOC105371045A0A1W2PR82 267 aa13.93□□□□□ -0.18
KPNB1-211ENST00000582097 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
KPNB1-211ENST00000582097 SOGA1O94964 1423 aa13.92□□□□□ -0.18
KPNB1-211ENST00000582097 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
KPNB1-211ENST00000582097 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
KPNB1-211ENST00000582097 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
KPNB1-211ENST00000582097 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
KPNB1-211ENST00000582097 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
KPNB1-211ENST00000582097 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
KPNB1-211ENST00000582097 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
KPNB1-211ENST00000582097 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
KPNB1-211ENST00000582097 EEA1Q15075 1411 aa13.82□□□□□ -0.2
KPNB1-211ENST00000582097 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
KPNB1-211ENST00000582097 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
KPNB1-211ENST00000582097 POLA1P09884 1462 aaPredicted RBP13.78□□□□□ -0.2
KPNB1-211ENST00000582097 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
KPNB1-211ENST00000582097 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
KPNB1-211ENST00000582097 CUX2O14529 1486 aa13.75□□□□□ -0.21
KPNB1-211ENST00000582097 KIF27Q86VH2 1401 aa13.75□□□□□ -0.21
KPNB1-211ENST00000582097 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
KPNB1-211ENST00000582097 WDR62O43379 1518 aa13.68□□□□□ -0.22
KPNB1-211ENST00000582097 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
KPNB1-211ENST00000582097 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
KPNB1-211ENST00000582097 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
KPNB1-211ENST00000582097 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
KPNB1-211ENST00000582097 IGF1RP08069 1367 aa13.65□□□□□ -0.22
KPNB1-211ENST00000582097 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
KPNB1-211ENST00000582097 KIF21BO75037 1637 aa13.63□□□□□ -0.23
KPNB1-211ENST00000582097 PRXQ9BXM0 1461 aa13.62□□□□□ -0.23
KPNB1-211ENST00000582097 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
KPNB1-211ENST00000582097 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
KPNB1-211ENST00000582097 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
KPNB1-211ENST00000582097 IFT140Q96RY7 1462 aa13.59□□□□□ -0.23
KPNB1-211ENST00000582097 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
KPNB1-211ENST00000582097 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
KPNB1-211ENST00000582097 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.248e-8■■■■■ 27.2
KPNB1-211ENST00000582097 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
KPNB1-211ENST00000582097 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
KPNB1-211ENST00000582097 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
KPNB1-211ENST00000582097 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
KPNB1-211ENST00000582097 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
KPNB1-211ENST00000582097 CUL7Q14999 1698 aa13.48□□□□□ -0.25
KPNB1-211ENST00000582097 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
KPNB1-211ENST00000582097 HRCP23327 699 aa13.47□□□□□ -0.25
KPNB1-211ENST00000582097 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
KPNB1-211ENST00000582097 PBRM1Q86U86 1689 aa13.46□□□□□ -0.25
KPNB1-211ENST00000582097 CLIP1P30622 1438 aa13.45□□□□□ -0.26
KPNB1-211ENST00000582097 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
KPNB1-211ENST00000582097 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
KPNB1-211ENST00000582097 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
KPNB1-211ENST00000582097 FBLN2P98095 1184 aa13.38□□□□□ -0.27
KPNB1-211ENST00000582097 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms