RNA–Protein interactions for RNA: ENST00000577426.1

TRAPPC8-202, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-202ENST00000577426 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC8-202ENST00000577426 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
TRAPPC8-202ENST00000577426 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC8-202ENST00000577426 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC8-202ENST00000577426 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
TRAPPC8-202ENST00000577426 FOXD1Q16676 465 aa14.17□□□□□ -0.14
TRAPPC8-202ENST00000577426 ADRA2BP18089 450 aa13.7□□□□□ -0.22
TRAPPC8-202ENST00000577426 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
TRAPPC8-202ENST00000577426 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC8-202ENST00000577426 MSH5O43196 834 aa13.05□□□□□ -0.32
TRAPPC8-202ENST00000577426 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
TRAPPC8-202ENST00000577426 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
TRAPPC8-202ENST00000577426 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
TRAPPC8-202ENST00000577426 KCNA4P22459 653 aa12.47□□□□□ -0.41
TRAPPC8-202ENST00000577426 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
TRAPPC8-202ENST00000577426 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC8-202ENST00000577426 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
TRAPPC8-202ENST00000577426 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
TRAPPC8-202ENST00000577426 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
TRAPPC8-202ENST00000577426 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-202ENST00000577426 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC8-202ENST00000577426 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-202ENST00000577426 DNAJC5BQ9UF47 199 aa11.91□□□□□ -0.5
TRAPPC8-202ENST00000577426 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
TRAPPC8-202ENST00000577426 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
TRAPPC8-202ENST00000577426 DNAJC5Q9H3Z4 198 aa11.69□□□□□ -0.54
TRAPPC8-202ENST00000577426 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
TRAPPC8-202ENST00000577426 ABCC9O60706 1549 aa11.65□□□□□ -0.55
TRAPPC8-202ENST00000577426 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
TRAPPC8-202ENST00000577426 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
TRAPPC8-202ENST00000577426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■□□□□ 9.8
TRAPPC8-202ENST00000577426 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
TRAPPC8-202ENST00000577426 ZBTB22O15209 634 aa11.45□□□□□ -0.58
TRAPPC8-202ENST00000577426 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
TRAPPC8-202ENST00000577426 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-202ENST00000577426 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-202ENST00000577426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC8-202ENST00000577426 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-202ENST00000577426 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
TRAPPC8-202ENST00000577426 SAMD1Q6SPF0 538 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC8-202ENST00000577426 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
TRAPPC8-202ENST00000577426 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
TRAPPC8-202ENST00000577426 APLP2Q06481 763 aa11.05□□□□□ -0.64
TRAPPC8-202ENST00000577426 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC8-202ENST00000577426 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC8-202ENST00000577426 CAPN15O75808 1086 aa10.9□□□□□ -0.66
TRAPPC8-202ENST00000577426 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC8-202ENST00000577426 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC8-202ENST00000577426 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
TRAPPC8-202ENST00000577426 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC8-202ENST00000577426 PABPN1Q86U42 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRAPPC8-202ENST00000577426 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.68
TRAPPC8-202ENST00000577426 NACADO15069 1562 aa10.72□□□□□ -0.69
TRAPPC8-202ENST00000577426 POLA2Q14181 598 aa10.71□□□□□ -0.69
TRAPPC8-202ENST00000577426 ABCB7O75027 752 aa10.68□□□□□ -0.7
TRAPPC8-202ENST00000577426 DSG3P32926 999 aa10.66□□□□□ -0.7
TRAPPC8-202ENST00000577426 UNC13AQ9UPW8 1703 aa10.62□□□□□ -0.71
TRAPPC8-202ENST00000577426 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
TRAPPC8-202ENST00000577426 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
TRAPPC8-202ENST00000577426 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
TRAPPC8-202ENST00000577426 FBLN2P98095 1184 aa10.54□□□□□ -0.72
TRAPPC8-202ENST00000577426 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC8-202ENST00000577426 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-202ENST00000577426 BICRAQ9NZM4 1560 aa10.48□□□□□ -0.73
TRAPPC8-202ENST00000577426 MKRN4PQ13434 485 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC8-202ENST00000577426 DCAF1Q9Y4B6 1507 aa10.47□□□□□ -0.73
TRAPPC8-202ENST00000577426 FKBP8Q14318 412 aa10.4□□□□□ -0.74
TRAPPC8-202ENST00000577426 CUX2O14529 1486 aa10.37□□□□□ -0.75
TRAPPC8-202ENST00000577426 SHROOM4Q9ULL8 1493 aa10.34□□□□□ -0.75
TRAPPC8-202ENST00000577426 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
TRAPPC8-202ENST00000577426 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
TRAPPC8-202ENST00000577426 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
TRAPPC8-202ENST00000577426 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
TRAPPC8-202ENST00000577426 ILDR1Q86SU0 546 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC8-202ENST00000577426 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC8-202ENST00000577426 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
TRAPPC8-202ENST00000577426 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
TRAPPC8-202ENST00000577426 SPDYE2Q495Y8 402 aa10.24□□□□□ -0.77
TRAPPC8-202ENST00000577426 EIF4G1Q04637 1599 aaKnown RBP10.2□□□□□ -0.78
TRAPPC8-202ENST00000577426 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
TRAPPC8-202ENST00000577426 ERCC6Q03468 1493 aa10.15□□□□□ -0.78
TRAPPC8-202ENST00000577426 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
TRAPPC8-202ENST00000577426 PROM2Q8N271 834 aa10.1□□□□□ -0.79
TRAPPC8-202ENST00000577426 AKT1S1Q96B36 256 aa10.07□□□□□ -0.8
TRAPPC8-202ENST00000577426 FBXO3Q9UK99 471 aa10.04□□□□□ -0.8
TRAPPC8-202ENST00000577426 REM2Q8IYK8 340 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC8-202ENST00000577426 STAG3Q9UJ98 1225 aa9.97□□□□□ -0.81
TRAPPC8-202ENST00000577426 SPDYE1Q8NFV5 336 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC8-202ENST00000577426 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
TRAPPC8-202ENST00000577426 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
TRAPPC8-202ENST00000577426 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
TRAPPC8-202ENST00000577426 VASPP50552 380 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC8-202ENST00000577426 ATAD2BQ9ULI0 1458 aa9.84□□□□□ -0.83
TRAPPC8-202ENST00000577426 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
TRAPPC8-202ENST00000577426 PRR29P0C7W0 189 aa9.83□□□□□ -0.84
TRAPPC8-202ENST00000577426 SMARCA2P51531 1590 aa9.83□□□□□ -0.84
TRAPPC8-202ENST00000577426 HMGXB3Q12766 1538 aa9.82□□□□□ -0.84
TRAPPC8-202ENST00000577426 MIER1Q8N108 512 aa9.82□□□□□ -0.84
TRAPPC8-202ENST00000577426 BAZ1AQ9NRL2 1556 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC8-202ENST00000577426 CYB5RLQ6IPT4 315 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms