RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 NISCHQ9Y2I1 1504 aa40.61■■■■■ 4.09
UBXN1-201ENST00000294119 ABCC9O60706 1549 aa37.83■■■■□ 3.65
UBXN1-201ENST00000294119 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
UBXN1-201ENST00000294119 DNAJC5BQ9UF47 199 aa36.54■■■■□ 3.44
UBXN1-201ENST00000294119 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
UBXN1-201ENST00000294119 NACADO15069 1562 aa35.14■■■■□ 3.22
UBXN1-201ENST00000294119 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.2
UBXN1-201ENST00000294119 UNC13AQ9UPW8 1703 aa34.85■■■■□ 3.17
UBXN1-201ENST00000294119 BICRAQ9NZM4 1560 aa34.72■■■■□ 3.15
UBXN1-201ENST00000294119 MYO15BQ96JP2 1530 aa34.42■■■■□ 3.1
UBXN1-201ENST00000294119 DCAF8L2P0C7V8 631 aa34.41■■■■□ 3.1
UBXN1-201ENST00000294119 DNAJC5Q9H3Z4 198 aa34.32■■■■□ 3.08
UBXN1-201ENST00000294119 CECR2Q9BXF3 1484 aa34.24■■■■□ 3.07
UBXN1-201ENST00000294119 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
UBXN1-201ENST00000294119 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
UBXN1-201ENST00000294119 EIF4G1Q04637 1599 aaKnown RBP33.89■■■■□ 3.02
UBXN1-201ENST00000294119 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
UBXN1-201ENST00000294119 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
UBXN1-201ENST00000294119 ZCCHC6Q5VYS8 1495 aaKnown RBP33.45■■■□□ 2.95
UBXN1-201ENST00000294119 CUX2O14529 1486 aa33.14■■■□□ 2.9
UBXN1-201ENST00000294119 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
UBXN1-201ENST00000294119 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
UBXN1-201ENST00000294119 NESP48681 1621 aa32.24■■■□□ 2.75
UBXN1-201ENST00000294119 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
UBXN1-201ENST00000294119 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
UBXN1-201ENST00000294119 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
UBXN1-201ENST00000294119 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
UBXN1-201ENST00000294119 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
UBXN1-201ENST00000294119 LAMC3Q9Y6N6 1575 aa31.89■■■□□ 2.7
UBXN1-201ENST00000294119 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
UBXN1-201ENST00000294119 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
UBXN1-201ENST00000294119 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.67
UBXN1-201ENST00000294119 PEG3Q9GZU2 1588 aa31.69■■■□□ 2.66
UBXN1-201ENST00000294119 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
UBXN1-201ENST00000294119 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
UBXN1-201ENST00000294119 WDR62O43379 1518 aa31.52■■■□□ 2.64
UBXN1-201ENST00000294119 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
UBXN1-201ENST00000294119 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
UBXN1-201ENST00000294119 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
UBXN1-201ENST00000294119 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
UBXN1-201ENST00000294119 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
UBXN1-201ENST00000294119 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
UBXN1-201ENST00000294119 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
UBXN1-201ENST00000294119 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
UBXN1-201ENST00000294119 FANCD2Q9BXW9 1451 aa31.01■■■□□ 2.56
UBXN1-201ENST00000294119 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
UBXN1-201ENST00000294119 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
UBXN1-201ENST00000294119 CFTRP13569 1480 aa30.86■■■□□ 2.53
UBXN1-201ENST00000294119 WIZO95785 1651 aa30.79■■■□□ 2.52
UBXN1-201ENST00000294119 ZNF608Q9ULD9 1512 aaPredicted RBP30.64■■■□□ 2.5
UBXN1-201ENST00000294119 CYB5RLQ6IPT4 315 aa30.63■■■□□ 2.49
UBXN1-201ENST00000294119 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
UBXN1-201ENST00000294119 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
UBXN1-201ENST00000294119 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
UBXN1-201ENST00000294119 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
UBXN1-201ENST00000294119 EIF4G3O43432 1585 aaKnown RBP30.41■■■□□ 2.46
UBXN1-201ENST00000294119 AEBP2Q6ZN18 517 aaPredicted RBP30.41■■■□□ 2.46
UBXN1-201ENST00000294119 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
UBXN1-201ENST00000294119 CHD1O14646 1710 aa30.36■■■□□ 2.45
UBXN1-201ENST00000294119 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
UBXN1-201ENST00000294119 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
UBXN1-201ENST00000294119 TARBP1Q13395 1621 aaKnown RBP30.19■■■□□ 2.42
UBXN1-201ENST00000294119 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.428e-8■■■■□ 24
UBXN1-201ENST00000294119 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
UBXN1-201ENST00000294119 DNMBPQ6XZF7 1577 aa30.13■■■□□ 2.41
UBXN1-201ENST00000294119 CLASP1Q7Z460 1538 aa30.09■■■□□ 2.41
UBXN1-201ENST00000294119 FBLN2P98095 1184 aa30.03■■■□□ 2.4
UBXN1-201ENST00000294119 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
UBXN1-201ENST00000294119 POLA1P09884 1462 aaPredicted RBP29.96■■■□□ 2.39
UBXN1-201ENST00000294119 SYNJ1O43426 1573 aa29.87■■■□□ 2.37
UBXN1-201ENST00000294119 SNAPC4Q5SXM2 1469 aa29.86■■■□□ 2.37
UBXN1-201ENST00000294119 WDR97A6NE52 1622 aa29.82■■■□□ 2.36
UBXN1-201ENST00000294119 RAD54L2Q9Y4B4 1467 aa29.82■■■□□ 2.36
UBXN1-201ENST00000294119 TDRD9Q8NDG6 1382 aaKnown RBP29.81■■■□□ 2.36
UBXN1-201ENST00000294119 MAGI1Q96QZ7 1491 aaPredicted RBP29.78■■■□□ 2.36
UBXN1-201ENST00000294119 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
UBXN1-201ENST00000294119 SOGA1O94964 1423 aa29.74■■■□□ 2.35
UBXN1-201ENST00000294119 CHMP7Q8WUX9 453 aaPredicted RBP29.71■■■□□ 2.35
UBXN1-201ENST00000294119 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
UBXN1-201ENST00000294119 GRIN2BQ13224 1484 aa29.63■■■□□ 2.33
UBXN1-201ENST00000294119 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
UBXN1-201ENST00000294119 ERCC6L2Q5T890 1561 aa29.49■■■□□ 2.31
UBXN1-201ENST00000294119 KIF13AQ9H1H9 1805 aa29.45■■■□□ 2.3
UBXN1-201ENST00000294119 PBRM1Q86U86 1689 aa29.44■■■□□ 2.3
UBXN1-201ENST00000294119 CUX1P39880 1505 aa29.43■■■□□ 2.3
UBXN1-201ENST00000294119 ILDR1Q86SU0 546 aaPredicted RBP29.39■■■□□ 2.3
UBXN1-201ENST00000294119 CEP170Q5SW79 1584 aa29.33■■■□□ 2.29
UBXN1-201ENST00000294119 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
UBXN1-201ENST00000294119 SHROOM2Q13796 1616 aa29.28■■■□□ 2.28
UBXN1-201ENST00000294119 NUP160Q12769 1436 aa29.28■■■□□ 2.28
UBXN1-201ENST00000294119 GRIN2AQ12879 1464 aa29.27■■■□□ 2.28
UBXN1-201ENST00000294119 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
UBXN1-201ENST00000294119 KDM4FA0A1W2PPD8 638 aa29.24■■■□□ 2.27
UBXN1-201ENST00000294119 ABCC10Q5T3U5 1492 aa29.15■■■□□ 2.26
UBXN1-201ENST00000294119 ADAMTS12P58397 1594 aa29.14■■■□□ 2.26
UBXN1-201ENST00000294119 MAPKBP1O60336 1514 aa29.05■■■□□ 2.24
UBXN1-201ENST00000294119 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
UBXN1-201ENST00000294119 FAM69CQ0P6D2 419 aa29.04■■■□□ 2.24
UBXN1-201ENST00000294119 KDM6BO15054 1643 aa29.01■■■□□ 2.23
UBXN1-201ENST00000294119 FHAD1B1AJZ9 1412 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms