RNA–Protein interactions for RNA: ENST00000487839.1

PRRC2A-213, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 5

Gene PRRC2A, Length 1,071 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-213ENST00000487839 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
PRRC2A-213ENST00000487839 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
PRRC2A-213ENST00000487839 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
PRRC2A-213ENST00000487839 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
PRRC2A-213ENST00000487839 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
PRRC2A-213ENST00000487839 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
PRRC2A-213ENST00000487839 ABCC9O60706 1549 aa21.16■□□□□ 0.98
PRRC2A-213ENST00000487839 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
PRRC2A-213ENST00000487839 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
PRRC2A-213ENST00000487839 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
PRRC2A-213ENST00000487839 NACADO15069 1562 aa20.12■□□□□ 0.81
PRRC2A-213ENST00000487839 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
PRRC2A-213ENST00000487839 FOXD1Q16676 465 aa19.84■□□□□ 0.77
PRRC2A-213ENST00000487839 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
PRRC2A-213ENST00000487839 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
PRRC2A-213ENST00000487839 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
PRRC2A-213ENST00000487839 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
PRRC2A-213ENST00000487839 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
PRRC2A-213ENST00000487839 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
PRRC2A-213ENST00000487839 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
PRRC2A-213ENST00000487839 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
PRRC2A-213ENST00000487839 ADRA2BP18089 450 aa19.31■□□□□ 0.68
PRRC2A-213ENST00000487839 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
PRRC2A-213ENST00000487839 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
PRRC2A-213ENST00000487839 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
PRRC2A-213ENST00000487839 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
PRRC2A-213ENST00000487839 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
PRRC2A-213ENST00000487839 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
PRRC2A-213ENST00000487839 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
PRRC2A-213ENST00000487839 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
PRRC2A-213ENST00000487839 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
PRRC2A-213ENST00000487839 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
PRRC2A-213ENST00000487839 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
PRRC2A-213ENST00000487839 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
PRRC2A-213ENST00000487839 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
PRRC2A-213ENST00000487839 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
PRRC2A-213ENST00000487839 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
PRRC2A-213ENST00000487839 WIZO95785 1651 aa18.23■□□□□ 0.51
PRRC2A-213ENST00000487839 MSH5O43196 834 aa18.23■□□□□ 0.51
PRRC2A-213ENST00000487839 NESP48681 1621 aa18.23■□□□□ 0.51
PRRC2A-213ENST00000487839 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
PRRC2A-213ENST00000487839 CUX2O14529 1486 aa18.12■□□□□ 0.49
PRRC2A-213ENST00000487839 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
PRRC2A-213ENST00000487839 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
PRRC2A-213ENST00000487839 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
PRRC2A-213ENST00000487839 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
PRRC2A-213ENST00000487839 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
PRRC2A-213ENST00000487839 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
PRRC2A-213ENST00000487839 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
PRRC2A-213ENST00000487839 KCNA4P22459 653 aa17.89■□□□□ 0.45
PRRC2A-213ENST00000487839 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
PRRC2A-213ENST00000487839 CFTRP13569 1480 aa17.84■□□□□ 0.45
PRRC2A-213ENST00000487839 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
PRRC2A-213ENST00000487839 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
PRRC2A-213ENST00000487839 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.45
PRRC2A-213ENST00000487839 WDR62O43379 1518 aa17.79■□□□□ 0.44
PRRC2A-213ENST00000487839 CCDC88BA6NC98 1476 aa17.79■□□□□ 0.44
PRRC2A-213ENST00000487839 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
PRRC2A-213ENST00000487839 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
PRRC2A-213ENST00000487839 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
PRRC2A-213ENST00000487839 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
PRRC2A-213ENST00000487839 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
PRRC2A-213ENST00000487839 TOPBP1Q92547 1522 aa17.52■□□□□ 0.39
PRRC2A-213ENST00000487839 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
PRRC2A-213ENST00000487839 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
PRRC2A-213ENST00000487839 IFT140Q96RY7 1462 aa17.46■□□□□ 0.39
PRRC2A-213ENST00000487839 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
PRRC2A-213ENST00000487839 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
PRRC2A-213ENST00000487839 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
PRRC2A-213ENST00000487839 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
PRRC2A-213ENST00000487839 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
PRRC2A-213ENST00000487839 EIF4G3O43432 1585 aaKnown RBP17.35■□□□□ 0.37
PRRC2A-213ENST00000487839 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
PRRC2A-213ENST00000487839 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
PRRC2A-213ENST00000487839 CUX1P39880 1505 aa17.29■□□□□ 0.36
PRRC2A-213ENST00000487839 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.365e-8■■■■■ 43.4
PRRC2A-213ENST00000487839 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
PRRC2A-213ENST00000487839 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
PRRC2A-213ENST00000487839 SOGA1O94964 1423 aa17.28■□□□□ 0.36
PRRC2A-213ENST00000487839 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
PRRC2A-213ENST00000487839 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
PRRC2A-213ENST00000487839 CHD1O14646 1710 aa17.21■□□□□ 0.35
PRRC2A-213ENST00000487839 FBLN2P98095 1184 aa17.19■□□□□ 0.34
PRRC2A-213ENST00000487839 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
PRRC2A-213ENST00000487839 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
PRRC2A-213ENST00000487839 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
PRRC2A-213ENST00000487839 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
PRRC2A-213ENST00000487839 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
PRRC2A-213ENST00000487839 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
PRRC2A-213ENST00000487839 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
PRRC2A-213ENST00000487839 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
PRRC2A-213ENST00000487839 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
PRRC2A-213ENST00000487839 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
PRRC2A-213ENST00000487839 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
PRRC2A-213ENST00000487839 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
PRRC2A-213ENST00000487839 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
PRRC2A-213ENST00000487839 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
PRRC2A-213ENST00000487839 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
PRRC2A-213ENST00000487839 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
PRRC2A-213ENST00000487839 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms