RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 DCAF8L2P0C7V8 631 aa26.6■■□□□ 1.85
TRAPPC8-201ENST00000283351 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.49
TRAPPC8-201ENST00000283351 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
TRAPPC8-201ENST00000283351 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
TRAPPC8-201ENST00000283351 FAM9AQ8IZU1 332 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC8-201ENST00000283351 APLP2Q06481 763 aa23.57■■□□□ 1.36
TRAPPC8-201ENST00000283351 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
TRAPPC8-201ENST00000283351 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC8-201ENST00000283351 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC8-201ENST00000283351 ATP1B4Q9UN42 357 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC8-201ENST00000283351 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
TRAPPC8-201ENST00000283351 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
TRAPPC8-201ENST00000283351 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
TRAPPC8-201ENST00000283351 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
TRAPPC8-201ENST00000283351 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
TRAPPC8-201ENST00000283351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC8-201ENST00000283351 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
TRAPPC8-201ENST00000283351 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
TRAPPC8-201ENST00000283351 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC8-201ENST00000283351 ERICH6Q7L0X2 663 aa22.13■■□□□ 1.13
TRAPPC8-201ENST00000283351 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
TRAPPC8-201ENST00000283351 ITGAEP38570 1179 aa21.98■■□□□ 1.11
TRAPPC8-201ENST00000283351 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
TRAPPC8-201ENST00000283351 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
TRAPPC8-201ENST00000283351 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC8-201ENST00000283351 NEFLP07196 543 aa21.81■■□□□ 1.08
TRAPPC8-201ENST00000283351 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
TRAPPC8-201ENST00000283351 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
TRAPPC8-201ENST00000283351 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC8-201ENST00000283351 FBLN2P98095 1184 aa21.62■■□□□ 1.05
TRAPPC8-201ENST00000283351 PABPN1Q86U42 306 aaKnown RBP eCLIP21.59■■□□□ 1.05
TRAPPC8-201ENST00000283351 DAXXQ9UER7 740 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC8-201ENST00000283351 BCANQ96GW7 911 aa21.42■■□□□ 1.02
TRAPPC8-201ENST00000283351 ABCC9O60706 1549 aa21.33■■□□□ 1.01
TRAPPC8-201ENST00000283351 SLC24A1O60721 1099 aa21.31■■□□□ 1
TRAPPC8-201ENST00000283351 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
TRAPPC8-201ENST00000283351 TRIM52Q96A61 297 aa21.29■■□□□ 1
TRAPPC8-201ENST00000283351 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
TRAPPC8-201ENST00000283351 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
TRAPPC8-201ENST00000283351 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
TRAPPC8-201ENST00000283351 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
TRAPPC8-201ENST00000283351 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
TRAPPC8-201ENST00000283351 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
TRAPPC8-201ENST00000283351 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
TRAPPC8-201ENST00000283351 TRIM26Q12899 539 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC8-201ENST00000283351 MYT1Q01538 1121 aa20.98■□□□□ 0.95
TRAPPC8-201ENST00000283351 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
TRAPPC8-201ENST00000283351 ZBTB47Q9UFB7 747 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC8-201ENST00000283351 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC8-201ENST00000283351 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
TRAPPC8-201ENST00000283351 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRAPPC8-201ENST00000283351 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.93
TRAPPC8-201ENST00000283351 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC8-201ENST00000283351 NEFMP07197 916 aa20.84■□□□□ 0.93
TRAPPC8-201ENST00000283351 CHGAP10645 457 aaKnown RBP20.81■□□□□ 0.92
TRAPPC8-201ENST00000283351 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
TRAPPC8-201ENST00000283351 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
TRAPPC8-201ENST00000283351 A0A0G2JS52 829 aa20.69■□□□□ 0.9
TRAPPC8-201ENST00000283351 HRCP23327 699 aa20.66■□□□□ 0.9
TRAPPC8-201ENST00000283351 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC8-201ENST00000283351 PLEKHG5O94827 1062 aa20.57■□□□□ 0.88
TRAPPC8-201ENST00000283351 RTL5Q5HYW3 569 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC8-201ENST00000283351 ANP32CO43423 234 aa20.46■□□□□ 0.87
TRAPPC8-201ENST00000283351 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC8-201ENST00000283351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.863e-6■□□□□ 9.2
TRAPPC8-201ENST00000283351 ZBTB7CA1YPR0 619 aa20.41■□□□□ 0.86
TRAPPC8-201ENST00000283351 C14orf37Q86TY3 774 aa20.4■□□□□ 0.86
TRAPPC8-201ENST00000283351 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
TRAPPC8-201ENST00000283351 ARID4BQ4LE39 1312 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC8-201ENST00000283351 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.84
TRAPPC8-201ENST00000283351 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
TRAPPC8-201ENST00000283351 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC8-201ENST00000283351 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC8-201ENST00000283351 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
TRAPPC8-201ENST00000283351 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
TRAPPC8-201ENST00000283351 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC8-201ENST00000283351 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
TRAPPC8-201ENST00000283351 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
TRAPPC8-201ENST00000283351 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
TRAPPC8-201ENST00000283351 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC8-201ENST00000283351 KDM2AQ9Y2K7 1162 aa20.1■□□□□ 0.81
TRAPPC8-201ENST00000283351 ARXQ96QS3 562 aa20.1■□□□□ 0.81
TRAPPC8-201ENST00000283351 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
TRAPPC8-201ENST00000283351 HSP90AA1P07900 732 aaKnown RBP20.03■□□□□ 0.8
TRAPPC8-201ENST00000283351 LMOD2Q6P5Q4 547 aa20.03■□□□□ 0.8
TRAPPC8-201ENST00000283351 TONSLQ96HA7 1378 aa20■□□□□ 0.79
TRAPPC8-201ENST00000283351 NPHP1O15259 732 aa19.92■□□□□ 0.78
TRAPPC8-201ENST00000283351 FAM9BQ8IZU0 186 aa19.9■□□□□ 0.78
TRAPPC8-201ENST00000283351 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
TRAPPC8-201ENST00000283351 WDR43Q15061 677 aaKnown RBP eCLIP19.9■□□□□ 0.78
TRAPPC8-201ENST00000283351 PLEKHD1A6NEE1 506 aa19.87■□□□□ 0.77
TRAPPC8-201ENST00000283351 MTUS2Q5JR59 1369 aa19.85■□□□□ 0.77
TRAPPC8-201ENST00000283351 PPM1GO15355 546 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC8-201ENST00000283351 MLECQ14165 292 aa19.82■□□□□ 0.76
TRAPPC8-201ENST00000283351 UPF2Q9HAU5 1272 aaKnown RBP19.82■□□□□ 0.76
TRAPPC8-201ENST00000283351 RGL3Q3MIN7 710 aa19.81■□□□□ 0.76
TRAPPC8-201ENST00000283351 CDK11BP21127 795 aaKnown RBP19.8■□□□□ 0.76
TRAPPC8-201ENST00000283351 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
TRAPPC8-201ENST00000283351 ANP32AP39687 249 aaKnown RBP19.79■□□□□ 0.76
TRAPPC8-201ENST00000283351 TULP1O00294 542 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms