RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 NISCHQ9Y2I1 1504 aa41.54■■■■■ 4.24
UBXN1-215ENST00000533476 CCDC180Q9P1Z9 1646 aa35.78■■■■□ 3.32
UBXN1-215ENST00000533476 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
UBXN1-215ENST00000533476 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
UBXN1-215ENST00000533476 DCAF1Q9Y4B6 1507 aa34.31■■■■□ 3.08
UBXN1-215ENST00000533476 DCAF8L2P0C7V8 631 aa34.02■■■■□ 3.04
UBXN1-215ENST00000533476 ABCC9O60706 1549 aa33.75■■■□□ 2.99
UBXN1-215ENST00000533476 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
UBXN1-215ENST00000533476 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
UBXN1-215ENST00000533476 SCRIBQ14160 1630 aa33.11■■■□□ 2.89
UBXN1-215ENST00000533476 NACADO15069 1562 aa33.1■■■□□ 2.89
UBXN1-215ENST00000533476 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
UBXN1-215ENST00000533476 RB1CC1Q8TDY2 1594 aa32.61■■■□□ 2.81
UBXN1-215ENST00000533476 RSF1Q96T23 1441 aaPredicted RBP32.59■■■□□ 2.81
UBXN1-215ENST00000533476 CECR2Q9BXF3 1484 aa32.25■■■□□ 2.75
UBXN1-215ENST00000533476 MROH2BQ7Z745 1585 aa32.17■■■□□ 2.74
UBXN1-215ENST00000533476 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
UBXN1-215ENST00000533476 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
UBXN1-215ENST00000533476 WIZO95785 1651 aa31.97■■■□□ 2.71
UBXN1-215ENST00000533476 SMARCA4P51532 1647 aa31.76■■■□□ 2.68
UBXN1-215ENST00000533476 PABPN1Q86U42 306 aaKnown RBP eCLIP31.71■■■□□ 2.67
UBXN1-215ENST00000533476 BICRAQ9NZM4 1560 aa31.67■■■□□ 2.66
UBXN1-215ENST00000533476 TOP2AP11388 1531 aaKnown RBP31.63■■■□□ 2.65
UBXN1-215ENST00000533476 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
UBXN1-215ENST00000533476 LOC105371045A0A1W2PR82 267 aa31.54■■■□□ 2.64
UBXN1-215ENST00000533476 EIF4G1Q04637 1599 aaKnown RBP31.52■■■□□ 2.64
UBXN1-215ENST00000533476 SMARCA2P51531 1590 aa31.37■■■□□ 2.61
UBXN1-215ENST00000533476 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
UBXN1-215ENST00000533476 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
UBXN1-215ENST00000533476 FAM9AQ8IZU1 332 aaPredicted RBP31.08■■■□□ 2.57
UBXN1-215ENST00000533476 PCGF6Q9BYE7 350 aa31.06■■■□□ 2.56
UBXN1-215ENST00000533476 ABCC8Q09428 1581 aa31■■■□□ 2.55
UBXN1-215ENST00000533476 ATAD2BQ9ULI0 1458 aa31■■■□□ 2.55
UBXN1-215ENST00000533476 HRCP23327 699 aa30.9■■■□□ 2.54
UBXN1-215ENST00000533476 BAZ1BQ9UIG0 1483 aaKnown RBP30.88■■■□□ 2.53
UBXN1-215ENST00000533476 TRIM26Q12899 539 aaPredicted RBP30.79■■■□□ 2.52
UBXN1-215ENST00000533476 EHMT2Q96KQ7 1210 aa30.65■■■□□ 2.5
UBXN1-215ENST00000533476 EEA1Q15075 1411 aa30.65■■■□□ 2.5
UBXN1-215ENST00000533476 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
UBXN1-215ENST00000533476 DNAJC5BQ9UF47 199 aa30.62■■■□□ 2.49
UBXN1-215ENST00000533476 HMGXB3Q12766 1538 aa30.6■■■□□ 2.49
UBXN1-215ENST00000533476 SOGA1O94964 1423 aa30.59■■■□□ 2.49
UBXN1-215ENST00000533476 NCAPD3P42695 1498 aa30.55■■■□□ 2.48
UBXN1-215ENST00000533476 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
UBXN1-215ENST00000533476 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
UBXN1-215ENST00000533476 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
UBXN1-215ENST00000533476 CSRNP3Q8WYN3 585 aa30.4■■■□□ 2.46
UBXN1-215ENST00000533476 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
UBXN1-215ENST00000533476 CEP162Q5TB80 1403 aa30.31■■■□□ 2.44
UBXN1-215ENST00000533476 GOLGA3Q08378 1498 aa30.3■■■□□ 2.44
UBXN1-215ENST00000533476 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
UBXN1-215ENST00000533476 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
UBXN1-215ENST00000533476 KIF21BO75037 1637 aa30.25■■■□□ 2.43
UBXN1-215ENST00000533476 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
UBXN1-215ENST00000533476 CFTRP13569 1480 aa30.14■■■□□ 2.42
UBXN1-215ENST00000533476 UBTFP17480 764 aaKnown RBP30.1■■■□□ 2.41
UBXN1-215ENST00000533476 PPARGC1BQ86YN6 1023 aaKnown RBP30.08■■■□□ 2.41
UBXN1-215ENST00000533476 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
UBXN1-215ENST00000533476 CUX1P39880 1505 aa30.02■■■□□ 2.4
UBXN1-215ENST00000533476 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
UBXN1-215ENST00000533476 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
UBXN1-215ENST00000533476 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
UBXN1-215ENST00000533476 CLIP1P30622 1438 aa29.86■■■□□ 2.37
UBXN1-215ENST00000533476 CADPSQ9ULU8 1353 aa29.84■■■□□ 2.37
UBXN1-215ENST00000533476 PRXQ9BXM0 1461 aa29.82■■■□□ 2.36
UBXN1-215ENST00000533476 KIF27Q86VH2 1401 aa29.77■■■□□ 2.36
UBXN1-215ENST00000533476 VPS8Q8N3P4 1428 aa29.73■■■□□ 2.35
UBXN1-215ENST00000533476 TTBK1Q5TCY1 1321 aaPredicted RBP29.6■■■□□ 2.33
UBXN1-215ENST00000533476 FANCD2Q9BXW9 1451 aa29.54■■■□□ 2.32
UBXN1-215ENST00000533476 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
UBXN1-215ENST00000533476 CUX2O14529 1486 aa29.51■■■□□ 2.32
UBXN1-215ENST00000533476 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
UBXN1-215ENST00000533476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.47■■■□□ 2.31
UBXN1-215ENST00000533476 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
UBXN1-215ENST00000533476 CCER1Q8TC90 406 aaPredicted RBP29.43■■■□□ 2.3
UBXN1-215ENST00000533476 IGF1RP08069 1367 aa29.42■■■□□ 2.3
UBXN1-215ENST00000533476 APLP2Q06481 763 aa29.4■■■□□ 2.3
UBXN1-215ENST00000533476 RANGAP1P46060 587 aaPredicted RBP29.39■■■□□ 2.3
UBXN1-215ENST00000533476 NESP48681 1621 aa29.37■■■□□ 2.29
UBXN1-215ENST00000533476 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
UBXN1-215ENST00000533476 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
UBXN1-215ENST00000533476 ARHGAP35Q9NRY4 1499 aa29.29■■■□□ 2.28
UBXN1-215ENST00000533476 CARMIL1Q5VZK9 1371 aa29.28■■■□□ 2.28
UBXN1-215ENST00000533476 ABCA10Q8WWZ4 1543 aa29.28■■■□□ 2.28
UBXN1-215ENST00000533476 POLA1P09884 1462 aaPredicted RBP29.26■■■□□ 2.27
UBXN1-215ENST00000533476 RAD54L2Q9Y4B4 1467 aa29.19■■■□□ 2.26
UBXN1-215ENST00000533476 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.26
UBXN1-215ENST00000533476 WDR97A6NE52 1622 aa29.13■■■□□ 2.25
UBXN1-215ENST00000533476 CUL7Q14999 1698 aa29.12■■■□□ 2.25
UBXN1-215ENST00000533476 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
UBXN1-215ENST00000533476 HNRNPUL2Q1KMD3 747 aaKnown RBP29.08■■■□□ 2.25
UBXN1-215ENST00000533476 KANK4Q5T7N3 995 aaPredicted RBP29.04■■■□□ 2.24
UBXN1-215ENST00000533476 MAP3K1Q13233 1512 aa29.02■■■□□ 2.24
UBXN1-215ENST00000533476 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
UBXN1-215ENST00000533476 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
UBXN1-215ENST00000533476 ERCC6Q03468 1493 aa28.99■■■□□ 2.23
UBXN1-215ENST00000533476 RRBP1Q9P2E9 1410 aaKnown RBP28.98■■■□□ 2.23
UBXN1-215ENST00000533476 TIAM1Q13009 1591 aa28.96■■■□□ 2.23
UBXN1-215ENST00000533476 CTTNBP2Q8WZ74 1663 aa28.95■■■□□ 2.22
UBXN1-215ENST00000533476 EFCAB5A4FU69 1503 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms