RNA–Protein interactions for RNA: ENST00000525717.5

UBXN1-206, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-206ENST00000525717 NISCHQ9Y2I1 1504 aa51.67■■■■■ 5.86
UBXN1-206ENST00000525717 CCDC180Q9P1Z9 1646 aa46.08■■■■■ 4.97
UBXN1-206ENST00000525717 ABCC9O60706 1549 aa45.83■■■■■ 4.93
UBXN1-206ENST00000525717 RB1CC1Q8TDY2 1594 aa43.72■■■■■ 4.59
UBXN1-206ENST00000525717 DCAF8L2P0C7V8 631 aa43.7■■■■■ 4.59
UBXN1-206ENST00000525717 NACADO15069 1562 aa43.49■■■■■ 4.55
UBXN1-206ENST00000525717 MYO15BQ96JP2 1530 aa42.94■■■■■ 4.46
UBXN1-206ENST00000525717 ZCCHC6Q5VYS8 1495 aaKnown RBP42.91■■■■■ 4.46
UBXN1-206ENST00000525717 PABPN1Q86U42 306 aaKnown RBP eCLIP42.81■■■■■ 4.44
UBXN1-206ENST00000525717 UNC13AQ9UPW8 1703 aa42.68■■■■■ 4.42
UBXN1-206ENST00000525717 DCAF1Q9Y4B6 1507 aa42.6■■■■■ 4.41
UBXN1-206ENST00000525717 DNAJC5BQ9UF47 199 aa42.53■■■■■ 4.4
UBXN1-206ENST00000525717 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
UBXN1-206ENST00000525717 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
UBXN1-206ENST00000525717 SHROOM4Q9ULL8 1493 aa41.79■■■■■ 4.28
UBXN1-206ENST00000525717 EIF4G1Q04637 1599 aaKnown RBP41.35■■■■■ 4.21
UBXN1-206ENST00000525717 CC2D2AQ9P2K1 1620 aa41.34■■■■■ 4.21
UBXN1-206ENST00000525717 CECR2Q9BXF3 1484 aa41.19■■■■■ 4.18
UBXN1-206ENST00000525717 SMARCA4P51532 1647 aa40.21■■■■■ 4.03
UBXN1-206ENST00000525717 NCAPD3P42695 1498 aa40.14■■■■■ 4.02
UBXN1-206ENST00000525717 ATAD2BQ9ULI0 1458 aa40.14■■■■■ 4.02
UBXN1-206ENST00000525717 BAZ1AQ9NRL2 1556 aaPredicted RBP40.08■■■■■ 4.01
UBXN1-206ENST00000525717 SMARCA2P51531 1590 aa40.04■■■■■ 4
UBXN1-206ENST00000525717 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
UBXN1-206ENST00000525717 MROH2BQ7Z745 1585 aa39.86■■■■□ 3.97
UBXN1-206ENST00000525717 BAZ1BQ9UIG0 1483 aaKnown RBP39.83■■■■□ 3.97
UBXN1-206ENST00000525717 PEG3Q9GZU2 1588 aa39.72■■■■□ 3.95
UBXN1-206ENST00000525717 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
UBXN1-206ENST00000525717 NESP48681 1621 aa39.48■■■■□ 3.91
UBXN1-206ENST00000525717 WIZO95785 1651 aa39.41■■■■□ 3.9
UBXN1-206ENST00000525717 RSF1Q96T23 1441 aaPredicted RBP39.2■■■■□ 3.87
UBXN1-206ENST00000525717 CUX2O14529 1486 aa39.18■■■■□ 3.86
UBXN1-206ENST00000525717 LAMC3Q9Y6N6 1575 aa39.17■■■■□ 3.86
UBXN1-206ENST00000525717 CADPSQ9ULU8 1353 aa39.01■■■■□ 3.84
UBXN1-206ENST00000525717 PDS5BQ9NTI5 1447 aa38.99■■■■□ 3.83
UBXN1-206ENST00000525717 KIF21AQ7Z4S6 1674 aa38.94■■■■□ 3.82
UBXN1-206ENST00000525717 TOP2AP11388 1531 aaKnown RBP38.92■■■■□ 3.82
UBXN1-206ENST00000525717 THOC2Q8NI27 1593 aaKnown RBP38.89■■■■□ 3.82
UBXN1-206ENST00000525717 DNAJC5Q9H3Z4 198 aa38.67■■■■□ 3.78
UBXN1-206ENST00000525717 MRC2Q9UBG0 1479 aa38.64■■■■□ 3.78
UBXN1-206ENST00000525717 CFTRP13569 1480 aa38.62■■■■□ 3.77
UBXN1-206ENST00000525717 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
UBXN1-206ENST00000525717 CEP164Q9UPV0 1460 aa38.6■■■■□ 3.77
UBXN1-206ENST00000525717 CCDC88BA6NC98 1476 aa38.51■■■■□ 3.76
UBXN1-206ENST00000525717 WDR62O43379 1518 aa38.47■■■■□ 3.75
UBXN1-206ENST00000525717 URB2Q14146 1524 aaKnown RBP38.23■■■■□ 3.71
UBXN1-206ENST00000525717 PRDM2Q13029 1718 aa38.22■■■■□ 3.71
UBXN1-206ENST00000525717 SUPT5HO00267 1087 aaKnown RBP38.05■■■■□ 3.68
UBXN1-206ENST00000525717 TOPBP1Q92547 1522 aa37.9■■■■□ 3.66
UBXN1-206ENST00000525717 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
UBXN1-206ENST00000525717 IFT140Q96RY7 1462 aa37.78■■■■□ 3.64
UBXN1-206ENST00000525717 DNMBPQ6XZF7 1577 aa37.78■■■■□ 3.64
UBXN1-206ENST00000525717 ZNF608Q9ULD9 1512 aaPredicted RBP37.71■■■■□ 3.63
UBXN1-206ENST00000525717 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
UBXN1-206ENST00000525717 POLA1P09884 1462 aaPredicted RBP37.54■■■■□ 3.6
UBXN1-206ENST00000525717 EIF4G3O43432 1585 aaKnown RBP37.49■■■■□ 3.59
UBXN1-206ENST00000525717 TARBP1Q13395 1621 aaKnown RBP37.47■■■■□ 3.59
UBXN1-206ENST00000525717 AQRO60306 1485 aaKnown RBP eCLIP37.46■■■■□ 3.598e-8■■■■□ 24
UBXN1-206ENST00000525717 RAD54L2Q9Y4B4 1467 aa37.46■■■■□ 3.59
UBXN1-206ENST00000525717 CUX1P39880 1505 aa37.42■■■■□ 3.58
UBXN1-206ENST00000525717 SOGA1O94964 1423 aa37.42■■■■□ 3.58
UBXN1-206ENST00000525717 FGD5Q6ZNL6 1462 aa37.4■■■■□ 3.58
UBXN1-206ENST00000525717 TRIM41Q8WV44 630 aa37.38■■■■□ 3.57
UBXN1-206ENST00000525717 TDRD9Q8NDG6 1382 aaKnown RBP37.32■■■■□ 3.57
UBXN1-206ENST00000525717 FBLN2P98095 1184 aa37.25■■■■□ 3.55
UBXN1-206ENST00000525717 CHD1O14646 1710 aa37.13■■■■□ 3.53
UBXN1-206ENST00000525717 SNAPC4Q5SXM2 1469 aa37.08■■■■□ 3.53
UBXN1-206ENST00000525717 WDR97A6NE52 1622 aa37.06■■■■□ 3.52
UBXN1-206ENST00000525717 GRIN2BQ13224 1484 aa37.01■■■■□ 3.52
UBXN1-206ENST00000525717 WRNQ14191 1432 aaPredicted RBP eCLIP37.01■■■■□ 3.51
UBXN1-206ENST00000525717 RIMBP3CA6NJZ7 1639 aa36.99■■■■□ 3.51
UBXN1-206ENST00000525717 RIMBP3BA6NNM3 1639 aa36.99■■■■□ 3.51
UBXN1-206ENST00000525717 RIMBP3Q9UFD9 1639 aa36.99■■■■□ 3.51
UBXN1-206ENST00000525717 CHMP7Q8WUX9 453 aaPredicted RBP36.97■■■■□ 3.51
UBXN1-206ENST00000525717 GAPVD1Q14C86 1478 aa36.96■■■■□ 3.51
UBXN1-206ENST00000525717 ABCA10Q8WWZ4 1543 aa36.95■■■■□ 3.5
UBXN1-206ENST00000525717 SYNJ1O43426 1573 aa36.93■■■■□ 3.5
UBXN1-206ENST00000525717 MAGI1Q96QZ7 1491 aaPredicted RBP36.93■■■■□ 3.5
UBXN1-206ENST00000525717 ARHGEF11O15085 1522 aa36.92■■■■□ 3.5
UBXN1-206ENST00000525717 TOP2BQ02880 1626 aa36.91■■■■□ 3.5
UBXN1-206ENST00000525717 BIVM-ERCC5R4GMW8 1640 aa36.89■■■■□ 3.5
UBXN1-206ENST00000525717 PBRM1Q86U86 1689 aa36.87■■■■□ 3.49
UBXN1-206ENST00000525717 ABCA5Q8WWZ7 1642 aa36.83■■■■□ 3.49
UBXN1-206ENST00000525717 SYNJ2O15056 1496 aa36.82■■■■□ 3.48
UBXN1-206ENST00000525717 CYB5RLQ6IPT4 315 aa36.73■■■■□ 3.47
UBXN1-206ENST00000525717 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
UBXN1-206ENST00000525717 ARAP1Q96P48 1450 aa36.6■■■■□ 3.45
UBXN1-206ENST00000525717 ADAMTS12P58397 1594 aa36.56■■■■□ 3.44
UBXN1-206ENST00000525717 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
UBXN1-206ENST00000525717 FHAD1B1AJZ9 1412 aa36.5■■■■□ 3.43
UBXN1-206ENST00000525717 ERICH3Q5RHP9 1530 aa36.48■■■■□ 3.43
UBXN1-206ENST00000525717 CEP170Q5SW79 1584 aa36.37■■■■□ 3.41
UBXN1-206ENST00000525717 NUP160Q12769 1436 aa36.34■■■■□ 3.41
UBXN1-206ENST00000525717 KIF27Q86VH2 1401 aa36.27■■■■□ 3.4
UBXN1-206ENST00000525717 TRHP20396 242 aaPredicted RBP36.24■■■■□ 3.39
UBXN1-206ENST00000525717 ERCC6L2Q5T890 1561 aa36.21■■■■□ 3.39
UBXN1-206ENST00000525717 IGF1RP08069 1367 aa36.17■■■■□ 3.38
UBXN1-206ENST00000525717 SHROOM2Q13796 1616 aa36.09■■■■□ 3.37
UBXN1-206ENST00000525717 JPH4Q96JJ6 628 aa36.06■■■■□ 3.36
UBXN1-206ENST00000525717 PRG4Q92954 1404 aaPredicted RBP36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms