RNA–Protein interactions for RNA: ENST00000526919.5

UBXN1-207, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-207ENST00000526919 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
UBXN1-207ENST00000526919 ABCC9O60706 1549 aa37.66■■■■□ 3.62
UBXN1-207ENST00000526919 CCDC180Q9P1Z9 1646 aa37.13■■■■□ 3.53
UBXN1-207ENST00000526919 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
UBXN1-207ENST00000526919 RB1CC1Q8TDY2 1594 aa35.59■■■■□ 3.29
UBXN1-207ENST00000526919 NACADO15069 1562 aa35.21■■■■□ 3.23
UBXN1-207ENST00000526919 PABPN1Q86U42 306 aaKnown RBP eCLIP35■■■■□ 3.19
UBXN1-207ENST00000526919 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
UBXN1-207ENST00000526919 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
UBXN1-207ENST00000526919 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
UBXN1-207ENST00000526919 MYO15BQ96JP2 1530 aa34.53■■■■□ 3.12
UBXN1-207ENST00000526919 CC2D2AQ9P2K1 1620 aa34.01■■■■□ 3.04
UBXN1-207ENST00000526919 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.03
UBXN1-207ENST00000526919 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
UBXN1-207ENST00000526919 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
UBXN1-207ENST00000526919 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
UBXN1-207ENST00000526919 SCRIBQ14160 1630 aa33.79■■■■□ 3
UBXN1-207ENST00000526919 EIF4G1Q04637 1599 aaKnown RBP33.78■■■■□ 3
UBXN1-207ENST00000526919 DNAJC5Q9H3Z4 198 aa33.32■■■□□ 2.92
UBXN1-207ENST00000526919 CUX2O14529 1486 aa32.67■■■□□ 2.82
UBXN1-207ENST00000526919 ERCC6Q03468 1493 aa32.53■■■□□ 2.8
UBXN1-207ENST00000526919 NCAPD3P42695 1498 aa32.52■■■□□ 2.8
UBXN1-207ENST00000526919 ATAD2BQ9ULI0 1458 aa32.35■■■□□ 2.77
UBXN1-207ENST00000526919 NESP48681 1621 aa32.22■■■□□ 2.75
UBXN1-207ENST00000526919 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
UBXN1-207ENST00000526919 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
UBXN1-207ENST00000526919 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
UBXN1-207ENST00000526919 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
UBXN1-207ENST00000526919 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
UBXN1-207ENST00000526919 BAZ1AQ9NRL2 1556 aaPredicted RBP31.92■■■□□ 2.7
UBXN1-207ENST00000526919 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
UBXN1-207ENST00000526919 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
UBXN1-207ENST00000526919 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
UBXN1-207ENST00000526919 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
UBXN1-207ENST00000526919 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
UBXN1-207ENST00000526919 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
UBXN1-207ENST00000526919 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
UBXN1-207ENST00000526919 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
UBXN1-207ENST00000526919 WDR62O43379 1518 aa31.4■■■□□ 2.62
UBXN1-207ENST00000526919 WIZO95785 1651 aa31.3■■■□□ 2.6
UBXN1-207ENST00000526919 CEP164Q9UPV0 1460 aa31.22■■■□□ 2.59
UBXN1-207ENST00000526919 FANCD2Q9BXW9 1451 aa31.14■■■□□ 2.58
UBXN1-207ENST00000526919 OSCARQ8IYS5 282 aa31.11■■■□□ 2.57
UBXN1-207ENST00000526919 CFTRP13569 1480 aa31.03■■■□□ 2.56
UBXN1-207ENST00000526919 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
UBXN1-207ENST00000526919 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
UBXN1-207ENST00000526919 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
UBXN1-207ENST00000526919 RIMBP3CA6NJZ7 1639 aa30.79■■■□□ 2.52
UBXN1-207ENST00000526919 RIMBP3BA6NNM3 1639 aa30.79■■■□□ 2.52
UBXN1-207ENST00000526919 RIMBP3Q9UFD9 1639 aa30.79■■■□□ 2.52
UBXN1-207ENST00000526919 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
UBXN1-207ENST00000526919 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
UBXN1-207ENST00000526919 IFT140Q96RY7 1462 aa30.62■■■□□ 2.49
UBXN1-207ENST00000526919 ARHGEF11O15085 1522 aa30.6■■■□□ 2.49
UBXN1-207ENST00000526919 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
UBXN1-207ENST00000526919 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
UBXN1-207ENST00000526919 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.46
UBXN1-207ENST00000526919 CYB5RLQ6IPT4 315 aa30.43■■■□□ 2.46
UBXN1-207ENST00000526919 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
UBXN1-207ENST00000526919 CHD1O14646 1710 aa30.37■■■□□ 2.45
UBXN1-207ENST00000526919 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
UBXN1-207ENST00000526919 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.444e-9■■■■■ 30.4
UBXN1-207ENST00000526919 TARBP1Q13395 1621 aaKnown RBP30.3■■■□□ 2.44
UBXN1-207ENST00000526919 ARAP1Q96P48 1450 aa30.27■■■□□ 2.44
UBXN1-207ENST00000526919 TRHP20396 242 aaPredicted RBP30.26■■■□□ 2.43
UBXN1-207ENST00000526919 FBLN2P98095 1184 aa30.21■■■□□ 2.43
UBXN1-207ENST00000526919 POLA1P09884 1462 aaPredicted RBP30.15■■■□□ 2.42
UBXN1-207ENST00000526919 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
UBXN1-207ENST00000526919 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
UBXN1-207ENST00000526919 SOGA1O94964 1423 aa30.02■■■□□ 2.4
UBXN1-207ENST00000526919 CLASP1Q7Z460 1538 aa29.97■■■□□ 2.39
UBXN1-207ENST00000526919 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
UBXN1-207ENST00000526919 WDR97A6NE52 1622 aa29.9■■■□□ 2.38
UBXN1-207ENST00000526919 CHMP7Q8WUX9 453 aaPredicted RBP29.89■■■□□ 2.38
UBXN1-207ENST00000526919 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
UBXN1-207ENST00000526919 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
UBXN1-207ENST00000526919 MAGI1Q96QZ7 1491 aaPredicted RBP29.85■■■□□ 2.37
UBXN1-207ENST00000526919 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
UBXN1-207ENST00000526919 CUX1P39880 1505 aa29.79■■■□□ 2.36
UBXN1-207ENST00000526919 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
UBXN1-207ENST00000526919 SYNJ2O15056 1496 aa29.76■■■□□ 2.35
UBXN1-207ENST00000526919 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
UBXN1-207ENST00000526919 GAPVD1Q14C86 1478 aa29.68■■■□□ 2.34
UBXN1-207ENST00000526919 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
UBXN1-207ENST00000526919 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
UBXN1-207ENST00000526919 ERCC6L2Q5T890 1561 aa29.5■■■□□ 2.31
UBXN1-207ENST00000526919 GRIN2AQ12879 1464 aa29.42■■■□□ 2.3
UBXN1-207ENST00000526919 CEP170Q5SW79 1584 aa29.38■■■□□ 2.29
UBXN1-207ENST00000526919 NUP160Q12769 1436 aa29.35■■■□□ 2.29
UBXN1-207ENST00000526919 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
UBXN1-207ENST00000526919 SHROOM2Q13796 1616 aa29.31■■■□□ 2.28
UBXN1-207ENST00000526919 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.28
UBXN1-207ENST00000526919 KIF13AQ9H1H9 1805 aa29.27■■■□□ 2.28
UBXN1-207ENST00000526919 FHAD1B1AJZ9 1412 aa29.22■■■□□ 2.27
UBXN1-207ENST00000526919 BIVM-ERCC5R4GMW8 1640 aa29.18■■■□□ 2.26
UBXN1-207ENST00000526919 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
UBXN1-207ENST00000526919 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
UBXN1-207ENST00000526919 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
UBXN1-207ENST00000526919 JPH4Q96JJ6 628 aa29.07■■■□□ 2.24
UBXN1-207ENST00000526919 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms