RNA–Protein interactions for RNA: ENST00000482838.1

BRD2-211, Transcript of bromodomain containing 2, humanhuman

TSL 2

Gene BRD2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-211ENST00000482838 NISCHQ9Y2I1 1504 aa13.29□□□□□ -0.28
BRD2-211ENST00000482838 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
BRD2-211ENST00000482838 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
BRD2-211ENST00000482838 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
BRD2-211ENST00000482838 ZCCHC6Q5VYS8 1495 aaKnown RBP11.14□□□□□ -0.63
BRD2-211ENST00000482838 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
BRD2-211ENST00000482838 DCAF8L2P0C7V8 631 aa11□□□□□ -0.65
BRD2-211ENST00000482838 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
BRD2-211ENST00000482838 ABCC9O60706 1549 aa10.85□□□□□ -0.67
BRD2-211ENST00000482838 NACADO15069 1562 aa10.81□□□□□ -0.68
BRD2-211ENST00000482838 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
BRD2-211ENST00000482838 SENP3Q9H4L4 574 aaPredicted RBP10.78□□□□□ -0.68
BRD2-211ENST00000482838 PHF23Q9BUL5 403 aaPredicted RBP10.7□□□□□ -0.7
BRD2-211ENST00000482838 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
BRD2-211ENST00000482838 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
BRD2-211ENST00000482838 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
BRD2-211ENST00000482838 UNC13AQ9UPW8 1703 aa10.41□□□□□ -0.74
BRD2-211ENST00000482838 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
BRD2-211ENST00000482838 BICRAQ9NZM4 1560 aa10.3□□□□□ -0.76
BRD2-211ENST00000482838 BAZ1AQ9NRL2 1556 aaPredicted RBP10.28□□□□□ -0.76
BRD2-211ENST00000482838 CECR2Q9BXF3 1484 aa10.27□□□□□ -0.77
BRD2-211ENST00000482838 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRD2-211ENST00000482838 MROH2BQ7Z745 1585 aa10.22□□□□□ -0.77
BRD2-211ENST00000482838 SMARCA4P51532 1647 aa10.18□□□□□ -0.78
BRD2-211ENST00000482838 FOXD1Q16676 465 aa10.16□□□□□ -0.78
BRD2-211ENST00000482838 WIZO95785 1651 aa10.15□□□□□ -0.79
BRD2-211ENST00000482838 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
BRD2-211ENST00000482838 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
BRD2-211ENST00000482838 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
BRD2-211ENST00000482838 ATAD2BQ9ULI0 1458 aa10.03□□□□□ -0.8
BRD2-211ENST00000482838 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
BRD2-211ENST00000482838 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
BRD2-211ENST00000482838 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
BRD2-211ENST00000482838 NCAPD3P42695 1498 aa9.97□□□□□ -0.81
BRD2-211ENST00000482838 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
BRD2-211ENST00000482838 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
BRD2-211ENST00000482838 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
BRD2-211ENST00000482838 DNAJC5BQ9UF47 199 aa9.78□□□□□ -0.84
BRD2-211ENST00000482838 CFTRP13569 1480 aa9.74□□□□□ -0.85
BRD2-211ENST00000482838 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
BRD2-211ENST00000482838 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
BRD2-211ENST00000482838 CADPSQ9ULU8 1353 aa9.72□□□□□ -0.85
BRD2-211ENST00000482838 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
BRD2-211ENST00000482838 EEA1Q15075 1411 aa9.67□□□□□ -0.86
BRD2-211ENST00000482838 LOC105371045A0A1W2PR82 267 aa9.66□□□□□ -0.86
BRD2-211ENST00000482838 POTEDQ86YR6 584 aa9.66□□□□□ -0.86
BRD2-211ENST00000482838 FAM9AQ8IZU1 332 aaPredicted RBP9.65□□□□□ -0.86
BRD2-211ENST00000482838 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
BRD2-211ENST00000482838 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
BRD2-211ENST00000482838 BIVM-ERCC5R4GMW8 1640 aa9.62□□□□□ -0.87
BRD2-211ENST00000482838 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
BRD2-211ENST00000482838 CSRNP3Q8WYN3 585 aa9.61□□□□□ -0.87
BRD2-211ENST00000482838 SOGA1O94964 1423 aa9.58□□□□□ -0.88
BRD2-211ENST00000482838 PDS5BQ9NTI5 1447 aa9.57□□□□□ -0.88
BRD2-211ENST00000482838 FANCD2Q9BXW9 1451 aa9.57□□□□□ -0.88
BRD2-211ENST00000482838 CUX1P39880 1505 aa9.56□□□□□ -0.88
BRD2-211ENST00000482838 NESP48681 1621 aa9.53□□□□□ -0.88
BRD2-211ENST00000482838 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.89
BRD2-211ENST00000482838 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
BRD2-211ENST00000482838 KIF27Q86VH2 1401 aa9.51□□□□□ -0.89
BRD2-211ENST00000482838 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
BRD2-211ENST00000482838 TNIKQ9UKE5 1360 aa9.5□□□□□ -0.89
BRD2-211ENST00000482838 GOLGA3Q08378 1498 aa9.49□□□□□ -0.89
BRD2-211ENST00000482838 UBTFP17480 764 aaKnown RBP9.48□□□□□ -0.89
BRD2-211ENST00000482838 KIF21BO75037 1637 aa9.48□□□□□ -0.89
BRD2-211ENST00000482838 MSH5O43196 834 aa9.47□□□□□ -0.89
BRD2-211ENST00000482838 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
BRD2-211ENST00000482838 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
BRD2-211ENST00000482838 TOPBP1Q92547 1522 aa9.46□□□□□ -0.89
BRD2-211ENST00000482838 PIAS4Q8N2W9 510 aaPredicted RBP9.44□□□□□ -0.9
BRD2-211ENST00000482838 KIF21AQ7Z4S6 1674 aa9.43□□□□□ -0.9
BRD2-211ENST00000482838 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
BRD2-211ENST00000482838 CUX2O14529 1486 aa9.42□□□□□ -0.9
BRD2-211ENST00000482838 PRXQ9BXM0 1461 aa9.42□□□□□ -0.9
BRD2-211ENST00000482838 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
BRD2-211ENST00000482838 ABCA10Q8WWZ4 1543 aa9.41□□□□□ -0.9
BRD2-211ENST00000482838 POLA1P09884 1462 aaPredicted RBP9.41□□□□□ -0.9
BRD2-211ENST00000482838 IGF1RP08069 1367 aa9.41□□□□□ -0.9
BRD2-211ENST00000482838 PPP6R1Q9UPN7 881 aa9.41□□□□□ -0.9
BRD2-211ENST00000482838 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
BRD2-211ENST00000482838 CEP162Q5TB80 1403 aa9.39□□□□□ -0.91
BRD2-211ENST00000482838 ADRA2BP18089 450 aa9.38□□□□□ -0.91
BRD2-211ENST00000482838 RAPGEF2Q9Y4G8 1499 aa9.38□□□□□ -0.91
BRD2-211ENST00000482838 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
BRD2-211ENST00000482838 CARMIL1Q5VZK9 1371 aa9.37□□□□□ -0.91
BRD2-211ENST00000482838 ERCC6Q03468 1493 aa9.35□□□□□ -0.91
BRD2-211ENST00000482838 TRIM26Q12899 539 aaPredicted RBP9.35□□□□□ -0.91
BRD2-211ENST00000482838 PLPPR3Q6T4P5 718 aa9.35□□□□□ -0.91
BRD2-211ENST00000482838 CLIP1P30622 1438 aa9.33□□□□□ -0.92
BRD2-211ENST00000482838 WDR62O43379 1518 aa9.33□□□□□ -0.92
BRD2-211ENST00000482838 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
BRD2-211ENST00000482838 CUL7Q14999 1698 aa9.32□□□□□ -0.92
BRD2-211ENST00000482838 GAPVD1Q14C86 1478 aa9.32□□□□□ -0.92
BRD2-211ENST00000482838 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
BRD2-211ENST00000482838 IFT140Q96RY7 1462 aa9.31□□□□□ -0.92
BRD2-211ENST00000482838 TDRD9Q8NDG6 1382 aaKnown RBP9.3□□□□□ -0.92
BRD2-211ENST00000482838 PCGF6Q9BYE7 350 aa9.3□□□□□ -0.92
BRD2-211ENST00000482838 ABCA5Q8WWZ7 1642 aa9.3□□□□□ -0.92
BRD2-211ENST00000482838 APLP2Q06481 763 aa9.28□□□□□ -0.92
BRD2-211ENST00000482838 VPS8Q8N3P4 1428 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms