RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NISCHQ9Y2I1 1504 aa21.33■■□□□ 1.01
TRAPPC8-211ENST00000582539 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
TRAPPC8-211ENST00000582539 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
TRAPPC8-211ENST00000582539 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
TRAPPC8-211ENST00000582539 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
TRAPPC8-211ENST00000582539 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
TRAPPC8-211ENST00000582539 NACADO15069 1562 aa17.48■□□□□ 0.39
TRAPPC8-211ENST00000582539 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
TRAPPC8-211ENST00000582539 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
TRAPPC8-211ENST00000582539 ABCC9O60706 1549 aa17.18■□□□□ 0.34
TRAPPC8-211ENST00000582539 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
TRAPPC8-211ENST00000582539 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
TRAPPC8-211ENST00000582539 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC8-211ENST00000582539 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC8-211ENST00000582539 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
TRAPPC8-211ENST00000582539 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
TRAPPC8-211ENST00000582539 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
TRAPPC8-211ENST00000582539 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
TRAPPC8-211ENST00000582539 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
TRAPPC8-211ENST00000582539 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
TRAPPC8-211ENST00000582539 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
TRAPPC8-211ENST00000582539 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAPPC8-211ENST00000582539 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
TRAPPC8-211ENST00000582539 EEA1Q15075 1411 aa16.15■□□□□ 0.18
TRAPPC8-211ENST00000582539 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
TRAPPC8-211ENST00000582539 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
TRAPPC8-211ENST00000582539 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
TRAPPC8-211ENST00000582539 WIZO95785 1651 aa16.05■□□□□ 0.16
TRAPPC8-211ENST00000582539 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
TRAPPC8-211ENST00000582539 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.15
TRAPPC8-211ENST00000582539 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
TRAPPC8-211ENST00000582539 CCDC88BA6NC98 1476 aa15.94■□□□□ 0.14
TRAPPC8-211ENST00000582539 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
TRAPPC8-211ENST00000582539 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.13
TRAPPC8-211ENST00000582539 APLP2Q06481 763 aa15.78■□□□□ 0.12
TRAPPC8-211ENST00000582539 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC8-211ENST00000582539 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
TRAPPC8-211ENST00000582539 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC8-211ENST00000582539 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
TRAPPC8-211ENST00000582539 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
TRAPPC8-211ENST00000582539 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
TRAPPC8-211ENST00000582539 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
TRAPPC8-211ENST00000582539 TRIM26Q12899 539 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC8-211ENST00000582539 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
TRAPPC8-211ENST00000582539 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
TRAPPC8-211ENST00000582539 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
TRAPPC8-211ENST00000582539 CFTRP13569 1480 aa15.61■□□□□ 0.09
TRAPPC8-211ENST00000582539 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
TRAPPC8-211ENST00000582539 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
TRAPPC8-211ENST00000582539 TOP2BQ02880 1626 aa15.52■□□□□ 0.08
TRAPPC8-211ENST00000582539 PRDM2Q13029 1718 aa15.52■□□□□ 0.08
TRAPPC8-211ENST00000582539 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
TRAPPC8-211ENST00000582539 KIF21BO75037 1637 aa15.48■□□□□ 0.07
TRAPPC8-211ENST00000582539 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
TRAPPC8-211ENST00000582539 LOC105371045A0A1W2PR82 267 aa15.46■□□□□ 0.07
TRAPPC8-211ENST00000582539 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
TRAPPC8-211ENST00000582539 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
TRAPPC8-211ENST00000582539 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
TRAPPC8-211ENST00000582539 CLIP1P30622 1438 aa15.35■□□□□ 0.05
TRAPPC8-211ENST00000582539 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
TRAPPC8-211ENST00000582539 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
TRAPPC8-211ENST00000582539 SYNJ1O43426 1573 aa15.33■□□□□ 0.04
TRAPPC8-211ENST00000582539 SOGA1O94964 1423 aa15.29■□□□□ 0.04
TRAPPC8-211ENST00000582539 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
TRAPPC8-211ENST00000582539 CUX2O14529 1486 aa15.28■□□□□ 0.04
TRAPPC8-211ENST00000582539 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
TRAPPC8-211ENST00000582539 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
TRAPPC8-211ENST00000582539 CUX1P39880 1505 aa15.24■□□□□ 0.03
TRAPPC8-211ENST00000582539 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
TRAPPC8-211ENST00000582539 HRCP23327 699 aa15.23■□□□□ 0.03
TRAPPC8-211ENST00000582539 VPS8Q8N3P4 1428 aa15.22■□□□□ 0.03
TRAPPC8-211ENST00000582539 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
TRAPPC8-211ENST00000582539 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
TRAPPC8-211ENST00000582539 CUL7Q14999 1698 aa15.2■□□□□ 0.02
TRAPPC8-211ENST00000582539 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
TRAPPC8-211ENST00000582539 PRXQ9BXM0 1461 aa15.19■□□□□ 0.02
TRAPPC8-211ENST00000582539 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
TRAPPC8-211ENST00000582539 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
TRAPPC8-211ENST00000582539 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
TRAPPC8-211ENST00000582539 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
TRAPPC8-211ENST00000582539 EFCAB5A4FU69 1503 aa15.14■□□□□ 0.01
TRAPPC8-211ENST00000582539 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
TRAPPC8-211ENST00000582539 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
TRAPPC8-211ENST00000582539 IGF1RP08069 1367 aa15.06■□□□□ 0
TRAPPC8-211ENST00000582539 CCER1Q8TC90 406 aaPredicted RBP15.06■□□□□ 0
TRAPPC8-211ENST00000582539 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
TRAPPC8-211ENST00000582539 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
TRAPPC8-211ENST00000582539 MAP3K1Q13233 1512 aa15.04■□□□□ -0
TRAPPC8-211ENST00000582539 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
TRAPPC8-211ENST00000582539 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
TRAPPC8-211ENST00000582539 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
TRAPPC8-211ENST00000582539 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
TRAPPC8-211ENST00000582539 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.01
TRAPPC8-211ENST00000582539 RANGAP1P46060 587 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC8-211ENST00000582539 CARMIL2Q6F5E8 1435 aa14.92□□□□□ -0.02
TRAPPC8-211ENST00000582539 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
TRAPPC8-211ENST00000582539 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
TRAPPC8-211ENST00000582539 ATP1B4Q9UN42 357 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC8-211ENST00000582539 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
TRAPPC8-211ENST00000582539 NESP48681 1621 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms