RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
TRAPPC8-207ENST00000580104 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
TRAPPC8-207ENST00000580104 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
TRAPPC8-207ENST00000580104 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
TRAPPC8-207ENST00000580104 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
TRAPPC8-207ENST00000580104 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.11
TRAPPC8-207ENST00000580104 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC8-207ENST00000580104 HRCP23327 699 aa21.35■■□□□ 1.01
TRAPPC8-207ENST00000580104 TTBK1Q5TCY1 1321 aaPredicted RBP21.32■■□□□ 1
TRAPPC8-207ENST00000580104 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
TRAPPC8-207ENST00000580104 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
TRAPPC8-207ENST00000580104 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
TRAPPC8-207ENST00000580104 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
TRAPPC8-207ENST00000580104 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC8-207ENST00000580104 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC8-207ENST00000580104 TRIM26Q12899 539 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC8-207ENST00000580104 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.94
TRAPPC8-207ENST00000580104 PELP1Q8IZL8 1130 aaKnown RBP20.88■□□□□ 0.93
TRAPPC8-207ENST00000580104 APLP2Q06481 763 aa20.84■□□□□ 0.93
TRAPPC8-207ENST00000580104 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC8-207ENST00000580104 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
TRAPPC8-207ENST00000580104 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
TRAPPC8-207ENST00000580104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC8-207ENST00000580104 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
TRAPPC8-207ENST00000580104 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
TRAPPC8-207ENST00000580104 MYT1Q01538 1121 aa20.22■□□□□ 0.83
TRAPPC8-207ENST00000580104 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC8-207ENST00000580104 GTF3C3Q9Y5Q9 886 aa20.13■□□□□ 0.81
TRAPPC8-207ENST00000580104 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
TRAPPC8-207ENST00000580104 ERICH6Q7L0X2 663 aa20.07■□□□□ 0.8
TRAPPC8-207ENST00000580104 ITGAEP38570 1179 aa20.04■□□□□ 0.8
TRAPPC8-207ENST00000580104 NEFLP07196 543 aa20.01■□□□□ 0.79
TRAPPC8-207ENST00000580104 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
TRAPPC8-207ENST00000580104 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
TRAPPC8-207ENST00000580104 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
TRAPPC8-207ENST00000580104 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
TRAPPC8-207ENST00000580104 ZNF316A6NFI3 1004 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC8-207ENST00000580104 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
TRAPPC8-207ENST00000580104 BCANQ96GW7 911 aa19.67■□□□□ 0.74
TRAPPC8-207ENST00000580104 CNGB1Q14028 1251 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC8-207ENST00000580104 ABCC9O60706 1549 aa19.57■□□□□ 0.72
TRAPPC8-207ENST00000580104 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRAPPC8-207ENST00000580104 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
TRAPPC8-207ENST00000580104 POLR3GLQ9BT43 218 aa19.49■□□□□ 0.71
TRAPPC8-207ENST00000580104 FAM50AQ14320 339 aaKnown RBP19.45■□□□□ 0.7
TRAPPC8-207ENST00000580104 SCRIBQ14160 1630 aa19.39■□□□□ 0.7
TRAPPC8-207ENST00000580104 MIER1Q8N108 512 aa19.36■□□□□ 0.69
TRAPPC8-207ENST00000580104 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
TRAPPC8-207ENST00000580104 ANP32CO43423 234 aa19.24■□□□□ 0.67
TRAPPC8-207ENST00000580104 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC8-207ENST00000580104 FKBP8Q14318 412 aa19.18■□□□□ 0.66
TRAPPC8-207ENST00000580104 TRIM52Q96A61 297 aa19.15■□□□□ 0.66
TRAPPC8-207ENST00000580104 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
TRAPPC8-207ENST00000580104 DDX10Q13206 875 aaKnown RBP19.12■□□□□ 0.65
TRAPPC8-207ENST00000580104 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC8-207ENST00000580104 DAXXQ9UER7 740 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC8-207ENST00000580104 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC8-207ENST00000580104 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
TRAPPC8-207ENST00000580104 HIRIP3Q9BW71 556 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC8-207ENST00000580104 ZNF326Q5BKZ1 582 aaKnown RBP18.98■□□□□ 0.63
TRAPPC8-207ENST00000580104 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
TRAPPC8-207ENST00000580104 CLIP1P30622 1438 aa18.93■□□□□ 0.62
TRAPPC8-207ENST00000580104 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRAPPC8-207ENST00000580104 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
TRAPPC8-207ENST00000580104 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC8-207ENST00000580104 TONSLQ96HA7 1378 aa18.82■□□□□ 0.6
TRAPPC8-207ENST00000580104 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
TRAPPC8-207ENST00000580104 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
TRAPPC8-207ENST00000580104 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
TRAPPC8-207ENST00000580104 FAM9BQ8IZU0 186 aa18.8■□□□□ 0.6
TRAPPC8-207ENST00000580104 SUPT16HQ9Y5B9 1047 aaKnown RBP18.78■□□□□ 0.6
TRAPPC8-207ENST00000580104 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
TRAPPC8-207ENST00000580104 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
TRAPPC8-207ENST00000580104 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
TRAPPC8-207ENST00000580104 SOGA1O94964 1423 aa18.74■□□□□ 0.59
TRAPPC8-207ENST00000580104 ANP32EQ9BTT0 268 aa18.71■□□□□ 0.58
TRAPPC8-207ENST00000580104 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
TRAPPC8-207ENST00000580104 EEA1Q15075 1411 aa18.69■□□□□ 0.58
TRAPPC8-207ENST00000580104 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
TRAPPC8-207ENST00000580104 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
TRAPPC8-207ENST00000580104 NBR1Q14596 966 aa18.67■□□□□ 0.58
TRAPPC8-207ENST00000580104 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
TRAPPC8-207ENST00000580104 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
TRAPPC8-207ENST00000580104 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC8-207ENST00000580104 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
TRAPPC8-207ENST00000580104 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
TRAPPC8-207ENST00000580104 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
TRAPPC8-207ENST00000580104 ZNF777Q9ULD5 760 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC8-207ENST00000580104 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
TRAPPC8-207ENST00000580104 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
TRAPPC8-207ENST00000580104 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
TRAPPC8-207ENST00000580104 CCDC136Q96JN2 1154 aa18.55■□□□□ 0.56
TRAPPC8-207ENST00000580104 FBLN2P98095 1184 aa18.51■□□□□ 0.55
TRAPPC8-207ENST00000580104 RRP7BPQ9NSQ0 103 aa18.49■□□□□ 0.55
TRAPPC8-207ENST00000580104 KANK4Q5T7N3 995 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC8-207ENST00000580104 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.54
TRAPPC8-207ENST00000580104 ZBTB47Q9UFB7 747 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC8-207ENST00000580104 TMC1Q8TDI8 760 aa18.45■□□□□ 0.54
TRAPPC8-207ENST00000580104 TSHZ2Q9NRE2 1034 aa18.44■□□□□ 0.54
TRAPPC8-207ENST00000580104 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms