RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
KPNB1-203ENST00000540627 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
KPNB1-203ENST00000540627 AEBP2Q6ZN18 517 aaPredicted RBP14.17□□□□□ -0.14
KPNB1-203ENST00000540627 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
KPNB1-203ENST00000540627 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
KPNB1-203ENST00000540627 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
KPNB1-203ENST00000540627 SHROOM4Q9ULL8 1493 aa12.63□□□□□ -0.39
KPNB1-203ENST00000540627 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.41
KPNB1-203ENST00000540627 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
KPNB1-203ENST00000540627 ZCCHC6Q5VYS8 1495 aaKnown RBP12.49□□□□□ -0.41
KPNB1-203ENST00000540627 KCNA4P22459 653 aa12.46□□□□□ -0.42
KPNB1-203ENST00000540627 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
KPNB1-203ENST00000540627 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
KPNB1-203ENST00000540627 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
KPNB1-203ENST00000540627 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
KPNB1-203ENST00000540627 DCAF1Q9Y4B6 1507 aa12.12□□□□□ -0.47
KPNB1-203ENST00000540627 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
KPNB1-203ENST00000540627 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
KPNB1-203ENST00000540627 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
KPNB1-203ENST00000540627 ADRA2BP18089 450 aa11.93□□□□□ -0.5
KPNB1-203ENST00000540627 HRCP23327 699 aa11.89□□□□□ -0.51
KPNB1-203ENST00000540627 PCGF6Q9BYE7 350 aa11.84□□□□□ -0.51
KPNB1-203ENST00000540627 ABCC9O60706 1549 aa11.8□□□□□ -0.52
KPNB1-203ENST00000540627 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
KPNB1-203ENST00000540627 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
KPNB1-203ENST00000540627 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.54
KPNB1-203ENST00000540627 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
KPNB1-203ENST00000540627 SENP3Q9H4L4 574 aaPredicted RBP11.62□□□□□ -0.55
KPNB1-203ENST00000540627 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
KPNB1-203ENST00000540627 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
KPNB1-203ENST00000540627 RB1CC1Q8TDY2 1594 aa11.59□□□□□ -0.55
KPNB1-203ENST00000540627 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
KPNB1-203ENST00000540627 NACADO15069 1562 aa11.57□□□□□ -0.56
KPNB1-203ENST00000540627 ZBTB22O15209 634 aa11.54□□□□□ -0.56
KPNB1-203ENST00000540627 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
KPNB1-203ENST00000540627 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
KPNB1-203ENST00000540627 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
KPNB1-203ENST00000540627 MROH2BQ7Z745 1585 aa11.46□□□□□ -0.57
KPNB1-203ENST00000540627 ZEB1P37275 1124 aaPredicted RBP11.43□□□□□ -0.58
KPNB1-203ENST00000540627 PPP6R1Q9UPN7 881 aa11.41□□□□□ -0.58
KPNB1-203ENST00000540627 WIZO95785 1651 aa11.4□□□□□ -0.58
KPNB1-203ENST00000540627 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
KPNB1-203ENST00000540627 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
KPNB1-203ENST00000540627 EIF4G1Q04637 1599 aaKnown RBP11.26□□□□□ -0.61
KPNB1-203ENST00000540627 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
KPNB1-203ENST00000540627 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
KPNB1-203ENST00000540627 SMARCA4P51532 1647 aa11.22□□□□□ -0.61
KPNB1-203ENST00000540627 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
KPNB1-203ENST00000540627 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.62
KPNB1-203ENST00000540627 CCDC88BA6NC98 1476 aa11.2□□□□□ -0.62
KPNB1-203ENST00000540627 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
KPNB1-203ENST00000540627 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
KPNB1-203ENST00000540627 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
KPNB1-203ENST00000540627 BCANQ96GW7 911 aa11.13□□□□□ -0.63
KPNB1-203ENST00000540627 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
KPNB1-203ENST00000540627 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
KPNB1-203ENST00000540627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
KPNB1-203ENST00000540627 FKBP8Q14318 412 aa11.11□□□□□ -0.63
KPNB1-203ENST00000540627 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
KPNB1-203ENST00000540627 EEA1Q15075 1411 aa11.1□□□□□ -0.63
KPNB1-203ENST00000540627 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
KPNB1-203ENST00000540627 SOGA1O94964 1423 aa11.09□□□□□ -0.63
KPNB1-203ENST00000540627 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
KPNB1-203ENST00000540627 TNIKQ9UKE5 1360 aa11.09□□□□□ -0.63
KPNB1-203ENST00000540627 UBTFP17480 764 aaKnown RBP11.05□□□□□ -0.64
KPNB1-203ENST00000540627 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
KPNB1-203ENST00000540627 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.646e-6■■□□□ 12.8
KPNB1-203ENST00000540627 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
KPNB1-203ENST00000540627 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
KPNB1-203ENST00000540627 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
KPNB1-203ENST00000540627 RUSC2Q8N2Y8 1516 aa11.02□□□□□ -0.65
KPNB1-203ENST00000540627 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
KPNB1-203ENST00000540627 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
KPNB1-203ENST00000540627 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
KPNB1-203ENST00000540627 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
KPNB1-203ENST00000540627 ARXQ96QS3 562 aa10.97□□□□□ -0.65
KPNB1-203ENST00000540627 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
KPNB1-203ENST00000540627 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
KPNB1-203ENST00000540627 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
KPNB1-203ENST00000540627 DIEXFQ68CQ4 756 aaKnown RBP10.93□□□□□ -0.66
KPNB1-203ENST00000540627 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
KPNB1-203ENST00000540627 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
KPNB1-203ENST00000540627 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
KPNB1-203ENST00000540627 KIF21BO75037 1637 aa10.91□□□□□ -0.66
KPNB1-203ENST00000540627 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
KPNB1-203ENST00000540627 CLIP1P30622 1438 aa10.89□□□□□ -0.67
KPNB1-203ENST00000540627 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
KPNB1-203ENST00000540627 APLP2Q06481 763 aa10.86□□□□□ -0.67
KPNB1-203ENST00000540627 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
KPNB1-203ENST00000540627 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
KPNB1-203ENST00000540627 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
KPNB1-203ENST00000540627 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
KPNB1-203ENST00000540627 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
KPNB1-203ENST00000540627 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
KPNB1-203ENST00000540627 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
KPNB1-203ENST00000540627 TOP2BQ02880 1626 aa10.8□□□□□ -0.68
KPNB1-203ENST00000540627 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
KPNB1-203ENST00000540627 FOXD1Q16676 465 aa10.79□□□□□ -0.68
KPNB1-203ENST00000540627 BIVM-ERCC5R4GMW8 1640 aa10.75□□□□□ -0.69
KPNB1-203ENST00000540627 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms