Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MGST1-209ENST00000536371 298 ntTSL 56.06□□□□□ -1.444e-8■□□□□ 10.4
SND1Q7KZF4 MGST1-216ENST00000540126 365 ntTSL 24.99□□□□□ -1.614e-8■□□□□ 10.4
SND1Q7KZF4 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.343e-8■□□□□ 10.4
SND1Q7KZF4 SPTAN1-224ENST00000630981 416 ntTSL 216.32■□□□□ 0.27e-8■□□□□ 10.4
SND1Q7KZF4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.81■□□□□ 0.443e-6■□□□□ 10.4
SND1Q7KZF4 KCNJ10-202ENST00000509700 870 ntTSL 511.72□□□□□ -0.533e-6■□□□□ 10.4
SND1Q7KZF4 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC9.21□□□□□ -0.943e-6■□□□□ 10.4
SND1Q7KZF4 KCNJ10-210ENST00000640914 565 ntTSL 58.51□□□□□ -1.053e-6■□□□□ 10.4
SND1Q7KZF4 LDHA-222ENST00000543695 554 ntTSL 512.11□□□□□ -0.473e-27■□□□□ 10.4
SND1Q7KZF4 LDHA-214ENST00000536528 516 ntTSL 37.09□□□□□ -1.273e-27■□□□□ 10.4
SND1Q7KZF4 TFR2-207ENST00000473374 891 ntTSL 522.07■■□□□ 1.123e-7■□□□□ 10.4
SND1Q7KZF4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.999e-7■□□□□ 10.4
SND1Q7KZF4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.6■■■□□ 2.819e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.989e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.869e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-205ENST00000360091 1289 ntTSL 520.25■□□□□ 0.839e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.79e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-218ENST00000483629 1818 ntTSL 519.3■□□□□ 0.689e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.15■□□□□ 0.669e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-221ENST00000610553 2300 ntTSL 218.94■□□□□ 0.629e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-215ENST00000469669 2630 ntTSL 218.82■□□□□ 0.69e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.69e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.37■□□□□ 0.539e-7■□□□□ 10.4
SND1Q7KZF4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.79■□□□□ 0.449e-7■□□□□ 10.4
SND1Q7KZF4 RFT1-203ENST00000467048 886 ntTSL 317.78■□□□□ 0.449e-7■□□□□ 10.4
SND1Q7KZF4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.381e-14■□□□□ 10.4
SND1Q7KZF4 SPPL2A-207ENST00000560288 742 ntTSL 217.13■□□□□ 0.339e-7■□□□□ 10.4
SND1Q7KZF4 PRDX2-203ENST00000466174 1717 ntTSL 1 (best)16.63■□□□□ 0.253e-11■□□□□ 10.4
SND1Q7KZF4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.219e-7■□□□□ 10.4
SND1Q7KZF4 CCNB1-204ENST00000506572 1331 ntTSL 1 (best)15.85■□□□□ 0.139e-7■□□□□ 10.4
SND1Q7KZF4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.129e-7■□□□□ 10.4
SND1Q7KZF4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.089e-7■□□□□ 10.4
SND1Q7KZF4 TMX3-205ENST00000564008 530 ntTSL 314.62□□□□□ -0.079e-7■□□□□ 10.4
SND1Q7KZF4 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC14.02□□□□□ -0.179e-7■□□□□ 10.4
SND1Q7KZF4 SNRPF-203ENST00000551316 787 ntTSL 214□□□□□ -0.172e-9■□□□□ 10.4
SND1Q7KZF4 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.229e-7■□□□□ 10.4
SND1Q7KZF4 TMX3-202ENST00000443099 913 ntTSL 2 BASIC12.47□□□□□ -0.419e-7■□□□□ 10.4
SND1Q7KZF4 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.449e-7■□□□□ 10.4
SND1Q7KZF4 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC12.15□□□□□ -0.463e-11■□□□□ 10.4
SND1Q7KZF4 EWSR1-216ENST00000479135 7285 ntTSL 1 (best)12.08□□□□□ -0.489e-7■□□□□ 10.4
SND1Q7KZF4 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.53e-11■□□□□ 10.4
SND1Q7KZF4 PRDX2-204ENST00000477555 699 ntTSL 211.48□□□□□ -0.573e-11■□□□□ 10.4
SND1Q7KZF4 DDB1-222ENST00000543627 540 ntTSL 511.48□□□□□ -0.579e-7■□□□□ 10.4
SND1Q7KZF4 PRDX2-205ENST00000478908 413 ntTSL 211.43□□□□□ -0.583e-11■□□□□ 10.4
SND1Q7KZF4 TMX3-210ENST00000569053 940 ntTSL 1 (best)11.2□□□□□ -0.629e-7■□□□□ 10.4
SND1Q7KZF4 TMX3-207ENST00000565918 710 ntTSL 511.2□□□□□ -0.629e-7■□□□□ 10.4
SND1Q7KZF4 PRDX2-206ENST00000498785 505 ntTSL 210.26□□□□□ -0.773e-11■□□□□ 10.4
SND1Q7KZF4 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.849e-7■□□□□ 10.4
SND1Q7KZF4 NNT-208ENST00000512996 4288 ntTSL 5 BASIC9.66□□□□□ -0.869e-7■□□□□ 10.4
SND1Q7KZF4 HOOK2-213ENST00000589765 108 ntTSL 59.31□□□□□ -0.923e-11■□□□□ 10.4
SND1Q7KZF4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC9.25□□□□□ -0.939e-7■□□□□ 10.4
SND1Q7KZF4 PPP2CB-209ENST00000523023 448 ntTSL 39.11□□□□□ -0.959e-7■□□□□ 10.4
SND1Q7KZF4 TRA2B-201ENST00000259043 943 ntTSL 38.95□□□□□ -0.982e-9■□□□□ 10.4
SND1Q7KZF4 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.019e-7■□□□□ 10.4
SND1Q7KZF4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.059e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.069e-7■□□□□ 10.4
SND1Q7KZF4 SPPL2A-203ENST00000558414 564 ntTSL 48.01□□□□□ -1.139e-7■□□□□ 10.4
SND1Q7KZF4 CCNB1-206ENST00000508407 780 ntTSL 27.76□□□□□ -1.179e-7■□□□□ 10.4
SND1Q7KZF4 TMX3-214ENST00000580785 675 ntTSL 57.67□□□□□ -1.189e-7■□□□□ 10.4
SND1Q7KZF4 CCNB1-203ENST00000505500 1190 ntTSL 1 (best)7.64□□□□□ -1.199e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.289e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-211ENST00000615071 344 ntTSL 26.83□□□□□ -1.329e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.329e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.49e-7■□□□□ 10.4
SND1Q7KZF4 CCNB1-205ENST00000507798 767 ntTSL 36.19□□□□□ -1.429e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.429e-7■□□□□ 10.4
SND1Q7KZF4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.43□□□□□ -1.549e-7■□□□□ 10.4
SND1Q7KZF4 TMX3-211ENST00000569982 582 ntTSL 42.96□□□□□ -1.949e-7■□□□□ 10.4
SND1Q7KZF4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.463e-13■□□□□ 10.3
SND1Q7KZF4 RPLP2-202ENST00000524867 598 ntTSL 226.2■■□□□ 1.789e-18■□□□□ 10.3
SND1Q7KZF4 PGD-204ENST00000477958 508 ntTSL 317.3■□□□□ 0.361e-7■□□□□ 10.3
SND1Q7KZF4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.143e-6■□□□□ 10.3
SND1Q7KZF4 SLC12A7-206ENST00000634447 3142 ntTSL 515.28■□□□□ 0.043e-6■□□□□ 10.3
SND1Q7KZF4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.08■□□□□ 0.489e-7■□□□□ 10.3
SND1Q7KZF4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.189e-7■□□□□ 10.3
SND1Q7KZF4 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.029e-7■□□□□ 10.3
SND1Q7KZF4 TFR2-206ENST00000465294 2763 ntTSL 215.02□□□□□ -0.019e-7■□□□□ 10.3
SND1Q7KZF4 HNRNPM-212ENST00000598999 409 ntTSL 216.91■□□□□ 0.32e-12■□□□□ 10.3
SND1Q7KZF4 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC10.23□□□□□ -0.779e-10■□□□□ 10.3
SND1Q7KZF4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.819e-10■□□□□ 10.3
SND1Q7KZF4 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.156e-10■□□□□ 10.3
SND1Q7KZF4 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC13.74□□□□□ -0.216e-10■□□□□ 10.3
SND1Q7KZF4 CCT8-204ENST00000470450 1872 ntTSL 1 (best)10.15□□□□□ -0.786e-10■□□□□ 10.3
SND1Q7KZF4 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.11□□□□□ -0.956e-10■□□□□ 10.3
SND1Q7KZF4 CCT8-202ENST00000431234 968 ntTSL 57.62□□□□□ -1.196e-10■□□□□ 10.3
SND1Q7KZF4 ANXA1-207ENST00000491192 1400 ntTSL 1 (best)7.44□□□□□ -1.224e-7■□□□□ 10.3
SND1Q7KZF4 C3-204ENST00000594936 625 ntTSL 216.7■□□□□ 0.261e-63■□□□□ 10.3
SND1Q7KZF4 DDB1-214ENST00000539426 805 ntTSL 311.22□□□□□ -0.614e-7■□□□□ 10.3
SND1Q7KZF4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22■■□□□ 1.113e-8■□□□□ 10.3
SND1Q7KZF4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.9■□□□□ 0.943e-8■□□□□ 10.3
SND1Q7KZF4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.263e-8■□□□□ 10.3
SND1Q7KZF4 WDR13-210ENST00000492873 470 ntTSL 214.98□□□□□ -0.013e-8■□□□□ 10.3
SND1Q7KZF4 WDR13-207ENST00000482760 562 ntTSL 314.15□□□□□ -0.143e-8■□□□□ 10.3
SND1Q7KZF4 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.243e-8■□□□□ 10.3
SND1Q7KZF4 COMT-210ENST00000467943 546 ntTSL 225.12■■□□□ 1.618e-31■□□□□ 10.3
SND1Q7KZF4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.22■□□□□ 0.832e-12■□□□□ 10.3
SND1Q7KZF4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-12■□□□□ 10.3
SND1Q7KZF4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.53□□□□□ -1.042e-12■□□□□ 10.3
SND1Q7KZF4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.322e-12■□□□□ 10.3
SND1Q7KZF4 UBA52-212ENST00000599256 927 ntTSL 224.27■■□□□ 1.489e-9■□□□□ 10.3
Retrieved 100 of 13,567 protein–RNA pairs in 74.4 ms