RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
TMX3-210ENST00000569053 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
TMX3-210ENST00000569053 ABCC9O60706 1549 aa25.04■■□□□ 1.6
TMX3-210ENST00000569053 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
TMX3-210ENST00000569053 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
TMX3-210ENST00000569053 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
TMX3-210ENST00000569053 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
TMX3-210ENST00000569053 NACADO15069 1562 aa23.49■■□□□ 1.35
TMX3-210ENST00000569053 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
TMX3-210ENST00000569053 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
TMX3-210ENST00000569053 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
TMX3-210ENST00000569053 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
TMX3-210ENST00000569053 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
TMX3-210ENST00000569053 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
TMX3-210ENST00000569053 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
TMX3-210ENST00000569053 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
TMX3-210ENST00000569053 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
TMX3-210ENST00000569053 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
TMX3-210ENST00000569053 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
TMX3-210ENST00000569053 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
TMX3-210ENST00000569053 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
TMX3-210ENST00000569053 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
TMX3-210ENST00000569053 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
TMX3-210ENST00000569053 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
TMX3-210ENST00000569053 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
TMX3-210ENST00000569053 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
TMX3-210ENST00000569053 NESP48681 1621 aa21.54■■□□□ 1.04
TMX3-210ENST00000569053 CUX2O14529 1486 aa21.53■■□□□ 1.04
TMX3-210ENST00000569053 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
TMX3-210ENST00000569053 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
TMX3-210ENST00000569053 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
TMX3-210ENST00000569053 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
TMX3-210ENST00000569053 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
TMX3-210ENST00000569053 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
TMX3-210ENST00000569053 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
TMX3-210ENST00000569053 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
TMX3-210ENST00000569053 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
TMX3-210ENST00000569053 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
TMX3-210ENST00000569053 WIZO95785 1651 aa21.12■□□□□ 0.97
TMX3-210ENST00000569053 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
TMX3-210ENST00000569053 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
TMX3-210ENST00000569053 FOXD1Q16676 465 aa20.96■□□□□ 0.95
TMX3-210ENST00000569053 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
TMX3-210ENST00000569053 WDR62O43379 1518 aa20.93■□□□□ 0.94
TMX3-210ENST00000569053 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
TMX3-210ENST00000569053 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
TMX3-210ENST00000569053 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
TMX3-210ENST00000569053 CFTRP13569 1480 aa20.81■□□□□ 0.92
TMX3-210ENST00000569053 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
TMX3-210ENST00000569053 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
TMX3-210ENST00000569053 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
TMX3-210ENST00000569053 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
TMX3-210ENST00000569053 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
TMX3-210ENST00000569053 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
TMX3-210ENST00000569053 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
TMX3-210ENST00000569053 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
TMX3-210ENST00000569053 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
TMX3-210ENST00000569053 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
TMX3-210ENST00000569053 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
TMX3-210ENST00000569053 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
TMX3-210ENST00000569053 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
TMX3-210ENST00000569053 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
TMX3-210ENST00000569053 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
TMX3-210ENST00000569053 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
TMX3-210ENST00000569053 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.844e-8■■■■□ 24.7
TMX3-210ENST00000569053 ARHGEF11O15085 1522 aa20.27■□□□□ 0.83
TMX3-210ENST00000569053 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
TMX3-210ENST00000569053 POLA1P09884 1462 aaPredicted RBP20.23■□□□□ 0.83
TMX3-210ENST00000569053 CHD1O14646 1710 aa20.22■□□□□ 0.83
TMX3-210ENST00000569053 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
TMX3-210ENST00000569053 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
TMX3-210ENST00000569053 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
TMX3-210ENST00000569053 SOGA1O94964 1423 aa20.1■□□□□ 0.81
TMX3-210ENST00000569053 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
TMX3-210ENST00000569053 FBLN2P98095 1184 aa20.09■□□□□ 0.81
TMX3-210ENST00000569053 CUX1P39880 1505 aa20.08■□□□□ 0.81
TMX3-210ENST00000569053 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
TMX3-210ENST00000569053 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
TMX3-210ENST00000569053 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
TMX3-210ENST00000569053 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
TMX3-210ENST00000569053 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
TMX3-210ENST00000569053 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
TMX3-210ENST00000569053 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
TMX3-210ENST00000569053 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
TMX3-210ENST00000569053 SYNJ2O15056 1496 aa19.87■□□□□ 0.77
TMX3-210ENST00000569053 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
TMX3-210ENST00000569053 MSH5O43196 834 aa19.86■□□□□ 0.77
TMX3-210ENST00000569053 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
TMX3-210ENST00000569053 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
TMX3-210ENST00000569053 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
TMX3-210ENST00000569053 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
TMX3-210ENST00000569053 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
TMX3-210ENST00000569053 ERCC6L2Q5T890 1561 aa19.75■□□□□ 0.75
TMX3-210ENST00000569053 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
TMX3-210ENST00000569053 CEP170Q5SW79 1584 aa19.69■□□□□ 0.74
TMX3-210ENST00000569053 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
TMX3-210ENST00000569053 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
TMX3-210ENST00000569053 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
TMX3-210ENST00000569053 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
TMX3-210ENST00000569053 NUP160Q12769 1436 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms