RNA–Protein interactions for RNA: ENST00000536528.5

LDHA-214, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 516 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-214ENST00000536528 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
LDHA-214ENST00000536528 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
LDHA-214ENST00000536528 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
LDHA-214ENST00000536528 ABCC9O60706 1549 aa15.34■□□□□ 0.05
LDHA-214ENST00000536528 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
LDHA-214ENST00000536528 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
LDHA-214ENST00000536528 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
LDHA-214ENST00000536528 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
LDHA-214ENST00000536528 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
LDHA-214ENST00000536528 FOXD1Q16676 465 aa14.21□□□□□ -0.13
LDHA-214ENST00000536528 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
LDHA-214ENST00000536528 NACADO15069 1562 aa14.17□□□□□ -0.14
LDHA-214ENST00000536528 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
LDHA-214ENST00000536528 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
LDHA-214ENST00000536528 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
LDHA-214ENST00000536528 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
LDHA-214ENST00000536528 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
LDHA-214ENST00000536528 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
LDHA-214ENST00000536528 CC2D2AQ9P2K1 1620 aa13.84□□□□□ -0.19
LDHA-214ENST00000536528 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
LDHA-214ENST00000536528 SHROOM4Q9ULL8 1493 aa13.72□□□□□ -0.21
LDHA-214ENST00000536528 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
LDHA-214ENST00000536528 EIF4G1Q04637 1599 aaKnown RBP13.7□□□□□ -0.22
LDHA-214ENST00000536528 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
LDHA-214ENST00000536528 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
LDHA-214ENST00000536528 MSH5O43196 834 aa13.42□□□□□ -0.26
LDHA-214ENST00000536528 CUX2O14529 1486 aa13.34□□□□□ -0.27
LDHA-214ENST00000536528 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
LDHA-214ENST00000536528 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
LDHA-214ENST00000536528 ADRA2BP18089 450 aa13.17□□□□□ -0.3
LDHA-214ENST00000536528 PPP6R1Q9UPN7 881 aa13.17□□□□□ -0.3
LDHA-214ENST00000536528 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
LDHA-214ENST00000536528 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
LDHA-214ENST00000536528 NESP48681 1621 aa13.06□□□□□ -0.32
LDHA-214ENST00000536528 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
LDHA-214ENST00000536528 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
LDHA-214ENST00000536528 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
LDHA-214ENST00000536528 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
LDHA-214ENST00000536528 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
LDHA-214ENST00000536528 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
LDHA-214ENST00000536528 SMARCA2P51531 1590 aa13□□□□□ -0.33
LDHA-214ENST00000536528 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
LDHA-214ENST00000536528 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
LDHA-214ENST00000536528 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
LDHA-214ENST00000536528 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
LDHA-214ENST00000536528 WIZO95785 1651 aa12.89□□□□□ -0.35
LDHA-214ENST00000536528 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
LDHA-214ENST00000536528 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
LDHA-214ENST00000536528 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
LDHA-214ENST00000536528 MRC2Q9UBG0 1479 aa12.74□□□□□ -0.37
LDHA-214ENST00000536528 WDR62O43379 1518 aa12.72□□□□□ -0.37
LDHA-214ENST00000536528 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
LDHA-214ENST00000536528 CADPSQ9ULU8 1353 aa12.63□□□□□ -0.39
LDHA-214ENST00000536528 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
LDHA-214ENST00000536528 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
LDHA-214ENST00000536528 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
LDHA-214ENST00000536528 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
LDHA-214ENST00000536528 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
LDHA-214ENST00000536528 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
LDHA-214ENST00000536528 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
LDHA-214ENST00000536528 CFTRP13569 1480 aa12.54□□□□□ -0.4
LDHA-214ENST00000536528 ARHGEF11O15085 1522 aa12.51□□□□□ -0.41
LDHA-214ENST00000536528 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
LDHA-214ENST00000536528 URB2Q14146 1524 aaKnown RBP12.48□□□□□ -0.41
LDHA-214ENST00000536528 PRDM2Q13029 1718 aa12.47□□□□□ -0.41
LDHA-214ENST00000536528 CHD1O14646 1710 aa12.4□□□□□ -0.42
LDHA-214ENST00000536528 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
LDHA-214ENST00000536528 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
LDHA-214ENST00000536528 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
LDHA-214ENST00000536528 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
LDHA-214ENST00000536528 ARAP1Q96P48 1450 aa12.35□□□□□ -0.43
LDHA-214ENST00000536528 IFT140Q96RY7 1462 aa12.35□□□□□ -0.43
LDHA-214ENST00000536528 TOPBP1Q92547 1522 aa12.27□□□□□ -0.44
LDHA-214ENST00000536528 FBLN2P98095 1184 aa12.23□□□□□ -0.45
LDHA-214ENST00000536528 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
LDHA-214ENST00000536528 CUX1P39880 1505 aa12.21□□□□□ -0.45
LDHA-214ENST00000536528 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.46
LDHA-214ENST00000536528 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.462e-8■■■■□ 21.2
LDHA-214ENST00000536528 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
LDHA-214ENST00000536528 SCAF1Q9H7N4 1312 aaKnown RBP12.17□□□□□ -0.46
LDHA-214ENST00000536528 CLASP1Q7Z460 1538 aa12.15□□□□□ -0.46
LDHA-214ENST00000536528 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
LDHA-214ENST00000536528 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
LDHA-214ENST00000536528 BIVM-ERCC5R4GMW8 1640 aa12.14□□□□□ -0.47
LDHA-214ENST00000536528 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
LDHA-214ENST00000536528 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
LDHA-214ENST00000536528 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
LDHA-214ENST00000536528 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
LDHA-214ENST00000536528 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
LDHA-214ENST00000536528 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
LDHA-214ENST00000536528 WDR97A6NE52 1622 aa12.09□□□□□ -0.47
LDHA-214ENST00000536528 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
LDHA-214ENST00000536528 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
LDHA-214ENST00000536528 SOGA1O94964 1423 aa12.05□□□□□ -0.48
LDHA-214ENST00000536528 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
LDHA-214ENST00000536528 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
LDHA-214ENST00000536528 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.48
LDHA-214ENST00000536528 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.48
LDHA-214ENST00000536528 CHMP7Q8WUX9 453 aaPredicted RBP12.02□□□□□ -0.49
LDHA-214ENST00000536528 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms