RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 NISCHQ9Y2I1 1504 aa34.86■■■■□ 3.17
EWSR1-221ENST00000610553 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
EWSR1-221ENST00000610553 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
EWSR1-221ENST00000610553 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
EWSR1-221ENST00000610553 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
EWSR1-221ENST00000610553 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
EWSR1-221ENST00000610553 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
EWSR1-221ENST00000610553 DCAF1Q9Y4B6 1507 aa28.67■■■□□ 2.18
EWSR1-221ENST00000610553 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
EWSR1-221ENST00000610553 HRCP23327 699 aa28.31■■■□□ 2.12
EWSR1-221ENST00000610553 ABCC9O60706 1549 aa28.17■■■□□ 2.1
EWSR1-221ENST00000610553 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
EWSR1-221ENST00000610553 LOC105371045A0A1W2PR82 267 aa27.78■■■□□ 2.04
EWSR1-221ENST00000610553 SCRIBQ14160 1630 aa27.71■■■□□ 2.03
EWSR1-221ENST00000610553 NACADO15069 1562 aa27.67■■■□□ 2.02
EWSR1-221ENST00000610553 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
EWSR1-221ENST00000610553 PPARGC1BQ86YN6 1023 aaKnown RBP27.59■■■□□ 2.01
EWSR1-221ENST00000610553 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
EWSR1-221ENST00000610553 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
EWSR1-221ENST00000610553 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
EWSR1-221ENST00000610553 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
EWSR1-221ENST00000610553 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
EWSR1-221ENST00000610553 ZEB1P37275 1124 aaPredicted RBP27.02■■□□□ 1.92
EWSR1-221ENST00000610553 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
EWSR1-221ENST00000610553 FAM9AQ8IZU1 332 aaPredicted RBP27.01■■□□□ 1.91
EWSR1-221ENST00000610553 WIZO95785 1651 aa26.97■■□□□ 1.91
EWSR1-221ENST00000610553 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
EWSR1-221ENST00000610553 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
EWSR1-221ENST00000610553 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
EWSR1-221ENST00000610553 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.868e-9■□□□□ 10.7
EWSR1-221ENST00000610553 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
EWSR1-221ENST00000610553 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
EWSR1-221ENST00000610553 SMARCA4P51532 1647 aa26.51■■□□□ 1.83
EWSR1-221ENST00000610553 SMARCA2P51531 1590 aa26.45■■□□□ 1.82
EWSR1-221ENST00000610553 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
EWSR1-221ENST00000610553 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
EWSR1-221ENST00000610553 WRNQ14191 1432 aaPredicted RBP eCLIP26.38■■□□□ 1.81
EWSR1-221ENST00000610553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
EWSR1-221ENST00000610553 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
EWSR1-221ENST00000610553 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
EWSR1-221ENST00000610553 SOGA1O94964 1423 aa26.23■■□□□ 1.79
EWSR1-221ENST00000610553 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
EWSR1-221ENST00000610553 EEA1Q15075 1411 aa26.22■■□□□ 1.79
EWSR1-221ENST00000610553 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
EWSR1-221ENST00000610553 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
EWSR1-221ENST00000610553 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
EWSR1-221ENST00000610553 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
EWSR1-221ENST00000610553 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
EWSR1-221ENST00000610553 GOLGA3Q08378 1498 aa26.03■■□□□ 1.76
EWSR1-221ENST00000610553 TTBK1Q5TCY1 1321 aaPredicted RBP25.96■■□□□ 1.75
EWSR1-221ENST00000610553 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
EWSR1-221ENST00000610553 UBTFP17480 764 aaKnown RBP25.93■■□□□ 1.74
EWSR1-221ENST00000610553 DIEXFQ68CQ4 756 aaKnown RBP25.9■■□□□ 1.74
EWSR1-221ENST00000610553 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
EWSR1-221ENST00000610553 KIF21BO75037 1637 aa25.89■■□□□ 1.73
EWSR1-221ENST00000610553 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
EWSR1-221ENST00000610553 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
EWSR1-221ENST00000610553 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
EWSR1-221ENST00000610553 NEUROD1Q13562 356 aa25.82■■□□□ 1.72
EWSR1-221ENST00000610553 CLIP1P30622 1438 aa25.71■■□□□ 1.71
EWSR1-221ENST00000610553 CENPBP07199 599 aaPredicted RBP25.69■■□□□ 1.7
EWSR1-221ENST00000610553 VPS8Q8N3P4 1428 aa25.67■■□□□ 1.7
EWSR1-221ENST00000610553 ZNF316A6NFI3 1004 aaPredicted RBP25.65■■□□□ 1.7
EWSR1-221ENST00000610553 RAPGEF2Q9Y4G8 1499 aa25.61■■□□□ 1.69
EWSR1-221ENST00000610553 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
EWSR1-221ENST00000610553 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
EWSR1-221ENST00000610553 GTF3C3Q9Y5Q9 886 aa25.57■■□□□ 1.68
EWSR1-221ENST00000610553 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
EWSR1-221ENST00000610553 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
EWSR1-221ENST00000610553 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
EWSR1-221ENST00000610553 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
EWSR1-221ENST00000610553 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
EWSR1-221ENST00000610553 APLP2Q06481 763 aa25.41■■□□□ 1.66
EWSR1-221ENST00000610553 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
EWSR1-221ENST00000610553 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
EWSR1-221ENST00000610553 MIER1Q8N108 512 aa25.29■■□□□ 1.64
EWSR1-221ENST00000610553 CLSPNQ9HAW4 1339 aa25.25■■□□□ 1.63
EWSR1-221ENST00000610553 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
EWSR1-221ENST00000610553 YTHDC1Q96MU7 727 aaKnown RBP25.23■■□□□ 1.63
EWSR1-221ENST00000610553 CUX1P39880 1505 aa25.22■■□□□ 1.63
EWSR1-221ENST00000610553 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
EWSR1-221ENST00000610553 CFTRP13569 1480 aa25.16■■□□□ 1.62
EWSR1-221ENST00000610553 RRBP1Q9P2E9 1410 aaKnown RBP25.14■■□□□ 1.62
EWSR1-221ENST00000610553 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
EWSR1-221ENST00000610553 KANK4Q5T7N3 995 aaPredicted RBP25.11■■□□□ 1.61
EWSR1-221ENST00000610553 CUX2O14529 1486 aa25.08■■□□□ 1.6
EWSR1-221ENST00000610553 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
EWSR1-221ENST00000610553 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
EWSR1-221ENST00000610553 PRDM2Q13029 1718 aa25■■□□□ 1.59
EWSR1-221ENST00000610553 CCNB3Q8WWL7 1395 aa24.96■■□□□ 1.59
EWSR1-221ENST00000610553 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
EWSR1-221ENST00000610553 NESP48681 1621 aa24.87■■□□□ 1.57
EWSR1-221ENST00000610553 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
EWSR1-221ENST00000610553 TIAM1Q13009 1591 aa24.84■■□□□ 1.57
EWSR1-221ENST00000610553 IGF1RP08069 1367 aa24.82■■□□□ 1.56
EWSR1-221ENST00000610553 MYT1Q01538 1121 aa24.79■■□□□ 1.56
EWSR1-221ENST00000610553 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
EWSR1-221ENST00000610553 MAPKBP1O60336 1514 aa24.78■■□□□ 1.56
EWSR1-221ENST00000610553 RAB3GAP2Q9H2M9 1393 aa24.76■■□□□ 1.55
EWSR1-221ENST00000610553 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms