RNA–Protein interactions for RNA: ENST00000594936.1

C3-204, Transcript of complement C3, humanhuman

TSL 2

Gene C3, Length 625 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-204ENST00000594936 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
C3-204ENST00000594936 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
C3-204ENST00000594936 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
C3-204ENST00000594936 ABCC9O60706 1549 aa31.47■■■□□ 2.63
C3-204ENST00000594936 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
C3-204ENST00000594936 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
C3-204ENST00000594936 NACADO15069 1562 aa31.02■■■□□ 2.56
C3-204ENST00000594936 RB1CC1Q8TDY2 1594 aa30.8■■■□□ 2.52
C3-204ENST00000594936 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
C3-204ENST00000594936 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
C3-204ENST00000594936 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
C3-204ENST00000594936 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
C3-204ENST00000594936 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
C3-204ENST00000594936 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
C3-204ENST00000594936 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
C3-204ENST00000594936 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
C3-204ENST00000594936 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
C3-204ENST00000594936 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
C3-204ENST00000594936 RSF1Q96T23 1441 aaPredicted RBP29■■■□□ 2.23
C3-204ENST00000594936 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
C3-204ENST00000594936 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
C3-204ENST00000594936 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
C3-204ENST00000594936 WIZO95785 1651 aa28.73■■■□□ 2.19
C3-204ENST00000594936 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
C3-204ENST00000594936 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
C3-204ENST00000594936 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
C3-204ENST00000594936 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
C3-204ENST00000594936 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
C3-204ENST00000594936 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
C3-204ENST00000594936 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
C3-204ENST00000594936 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
C3-204ENST00000594936 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
C3-204ENST00000594936 CFTRP13569 1480 aa27.81■■■□□ 2.04
C3-204ENST00000594936 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
C3-204ENST00000594936 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
C3-204ENST00000594936 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
C3-204ENST00000594936 NESP48681 1621 aa27.5■■□□□ 1.99
C3-204ENST00000594936 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
C3-204ENST00000594936 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
C3-204ENST00000594936 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
C3-204ENST00000594936 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
C3-204ENST00000594936 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
C3-204ENST00000594936 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
C3-204ENST00000594936 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
C3-204ENST00000594936 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
C3-204ENST00000594936 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
C3-204ENST00000594936 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
C3-204ENST00000594936 CUX1P39880 1505 aa27.18■■□□□ 1.94
C3-204ENST00000594936 DNMBPQ6XZF7 1577 aa27.15■■□□□ 1.94
C3-204ENST00000594936 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
C3-204ENST00000594936 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
C3-204ENST00000594936 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
C3-204ENST00000594936 TOPBP1Q92547 1522 aa27.08■■□□□ 1.93
C3-204ENST00000594936 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
C3-204ENST00000594936 WDR62O43379 1518 aa27.04■■□□□ 1.92
C3-204ENST00000594936 THOC2Q8NI27 1593 aaKnown RBP27.03■■□□□ 1.92
C3-204ENST00000594936 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
C3-204ENST00000594936 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
C3-204ENST00000594936 EEA1Q15075 1411 aa26.81■■□□□ 1.88
C3-204ENST00000594936 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
C3-204ENST00000594936 WDR97A6NE52 1622 aa26.78■■□□□ 1.88
C3-204ENST00000594936 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
C3-204ENST00000594936 CUX2O14529 1486 aa26.77■■□□□ 1.88
C3-204ENST00000594936 SOGA1O94964 1423 aa26.76■■□□□ 1.87
C3-204ENST00000594936 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
C3-204ENST00000594936 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
C3-204ENST00000594936 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
C3-204ENST00000594936 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
C3-204ENST00000594936 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
C3-204ENST00000594936 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
C3-204ENST00000594936 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
C3-204ENST00000594936 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
C3-204ENST00000594936 IGF1RP08069 1367 aa26.46■■□□□ 1.83
C3-204ENST00000594936 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.83
C3-204ENST00000594936 EIF4G3O43432 1585 aaKnown RBP26.45■■□□□ 1.82
C3-204ENST00000594936 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
C3-204ENST00000594936 KIF21BO75037 1637 aa26.44■■□□□ 1.82
C3-204ENST00000594936 PRXQ9BXM0 1461 aa26.43■■□□□ 1.82
C3-204ENST00000594936 CUL7Q14999 1698 aa26.42■■□□□ 1.82
C3-204ENST00000594936 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
C3-204ENST00000594936 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
C3-204ENST00000594936 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.817e-15■■■■■ 35.8
C3-204ENST00000594936 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
C3-204ENST00000594936 CARMIL1Q5VZK9 1371 aa26.29■■□□□ 1.8
C3-204ENST00000594936 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
C3-204ENST00000594936 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
C3-204ENST00000594936 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
C3-204ENST00000594936 RAPGEF2Q9Y4G8 1499 aa26.26■■□□□ 1.79
C3-204ENST00000594936 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
C3-204ENST00000594936 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
C3-204ENST00000594936 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
C3-204ENST00000594936 TNIKQ9UKE5 1360 aa26.13■■□□□ 1.77
C3-204ENST00000594936 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
C3-204ENST00000594936 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
C3-204ENST00000594936 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
C3-204ENST00000594936 UBTFP17480 764 aaKnown RBP25.97■■□□□ 1.75
C3-204ENST00000594936 NUP160Q12769 1436 aa25.96■■□□□ 1.75
C3-204ENST00000594936 CHD1O14646 1710 aa25.94■■□□□ 1.74
C3-204ENST00000594936 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
C3-204ENST00000594936 KIAA0586Q9BVV6 1533 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 237.7 ms