RNA–Protein interactions for RNA: ENST00000222388.6

ABCF2-201, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 5 BASIC

Gene ABCF2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-201ENST00000222388 NISCHQ9Y2I1 1504 aa28.17■■■□□ 2.1
ABCF2-201ENST00000222388 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
ABCF2-201ENST00000222388 ABCC9O60706 1549 aa23.65■■□□□ 1.38
ABCF2-201ENST00000222388 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
ABCF2-201ENST00000222388 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
ABCF2-201ENST00000222388 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
ABCF2-201ENST00000222388 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
ABCF2-201ENST00000222388 NACADO15069 1562 aa23.06■■□□□ 1.28
ABCF2-201ENST00000222388 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
ABCF2-201ENST00000222388 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
ABCF2-201ENST00000222388 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
ABCF2-201ENST00000222388 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
ABCF2-201ENST00000222388 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
ABCF2-201ENST00000222388 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
ABCF2-201ENST00000222388 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
ABCF2-201ENST00000222388 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
ABCF2-201ENST00000222388 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
ABCF2-201ENST00000222388 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
ABCF2-201ENST00000222388 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
ABCF2-201ENST00000222388 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
ABCF2-201ENST00000222388 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
ABCF2-201ENST00000222388 WIZO95785 1651 aa21.6■■□□□ 1.05
ABCF2-201ENST00000222388 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
ABCF2-201ENST00000222388 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
ABCF2-201ENST00000222388 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
ABCF2-201ENST00000222388 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
ABCF2-201ENST00000222388 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.02
ABCF2-201ENST00000222388 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1.01
ABCF2-201ENST00000222388 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
ABCF2-201ENST00000222388 NCAPD3P42695 1498 aa21.27■■□□□ 1
ABCF2-201ENST00000222388 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
ABCF2-201ENST00000222388 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
ABCF2-201ENST00000222388 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
ABCF2-201ENST00000222388 LOC105371045A0A1W2PR82 267 aa20.85■□□□□ 0.93
ABCF2-201ENST00000222388 HRCP23327 699 aa20.8■□□□□ 0.92
ABCF2-201ENST00000222388 PCGF6Q9BYE7 350 aa20.79■□□□□ 0.92
ABCF2-201ENST00000222388 CFTRP13569 1480 aa20.73■□□□□ 0.91
ABCF2-201ENST00000222388 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
ABCF2-201ENST00000222388 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
ABCF2-201ENST00000222388 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
ABCF2-201ENST00000222388 NESP48681 1621 aa20.67■□□□□ 0.9
ABCF2-201ENST00000222388 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
ABCF2-201ENST00000222388 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
ABCF2-201ENST00000222388 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
ABCF2-201ENST00000222388 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
ABCF2-201ENST00000222388 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
ABCF2-201ENST00000222388 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
ABCF2-201ENST00000222388 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
ABCF2-201ENST00000222388 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
ABCF2-201ENST00000222388 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
ABCF2-201ENST00000222388 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
ABCF2-201ENST00000222388 CUX1P39880 1505 aa20.37■□□□□ 0.85
ABCF2-201ENST00000222388 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
ABCF2-201ENST00000222388 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
ABCF2-201ENST00000222388 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
ABCF2-201ENST00000222388 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
ABCF2-201ENST00000222388 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
ABCF2-201ENST00000222388 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.84
ABCF2-201ENST00000222388 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
ABCF2-201ENST00000222388 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
ABCF2-201ENST00000222388 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
ABCF2-201ENST00000222388 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
ABCF2-201ENST00000222388 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
ABCF2-201ENST00000222388 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
ABCF2-201ENST00000222388 SOGA1O94964 1423 aa20.14■□□□□ 0.81
ABCF2-201ENST00000222388 WDR62O43379 1518 aa20.13■□□□□ 0.81
ABCF2-201ENST00000222388 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
ABCF2-201ENST00000222388 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.8
ABCF2-201ENST00000222388 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
ABCF2-201ENST00000222388 CUX2O14529 1486 aa20.02■□□□□ 0.8
ABCF2-201ENST00000222388 EEA1Q15075 1411 aa20.02■□□□□ 0.79
ABCF2-201ENST00000222388 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
ABCF2-201ENST00000222388 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
ABCF2-201ENST00000222388 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
ABCF2-201ENST00000222388 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
ABCF2-201ENST00000222388 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
ABCF2-201ENST00000222388 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
ABCF2-201ENST00000222388 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
ABCF2-201ENST00000222388 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
ABCF2-201ENST00000222388 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
ABCF2-201ENST00000222388 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
ABCF2-201ENST00000222388 AQRO60306 1485 aaKnown RBP eCLIP19.83■□□□□ 0.773e-6■■■■□ 24.7
ABCF2-201ENST00000222388 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
ABCF2-201ENST00000222388 IGF1RP08069 1367 aa19.81■□□□□ 0.76
ABCF2-201ENST00000222388 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
ABCF2-201ENST00000222388 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
ABCF2-201ENST00000222388 KIF21BO75037 1637 aa19.8■□□□□ 0.76
ABCF2-201ENST00000222388 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
ABCF2-201ENST00000222388 PRXQ9BXM0 1461 aa19.76■□□□□ 0.75
ABCF2-201ENST00000222388 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
ABCF2-201ENST00000222388 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
ABCF2-201ENST00000222388 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
ABCF2-201ENST00000222388 CUL7Q14999 1698 aa19.74■□□□□ 0.75
ABCF2-201ENST00000222388 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
ABCF2-201ENST00000222388 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
ABCF2-201ENST00000222388 UBTFP17480 764 aaKnown RBP19.71■□□□□ 0.75
ABCF2-201ENST00000222388 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
ABCF2-201ENST00000222388 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
ABCF2-201ENST00000222388 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
ABCF2-201ENST00000222388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms