RNA–Protein interactions for RNA: ENST00000562706.5

TMX3-204, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMX3, Length 937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-204ENST00000562706 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
TMX3-204ENST00000562706 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
TMX3-204ENST00000562706 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
TMX3-204ENST00000562706 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
TMX3-204ENST00000562706 FOXD1Q16676 465 aa20.73■□□□□ 0.91
TMX3-204ENST00000562706 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
TMX3-204ENST00000562706 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
TMX3-204ENST00000562706 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
TMX3-204ENST00000562706 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
TMX3-204ENST00000562706 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
TMX3-204ENST00000562706 ADRA2BP18089 450 aa19.38■□□□□ 0.69
TMX3-204ENST00000562706 ABCC9O60706 1549 aa19.35■□□□□ 0.69
TMX3-204ENST00000562706 MSH5O43196 834 aa19.35■□□□□ 0.69
TMX3-204ENST00000562706 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
TMX3-204ENST00000562706 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
TMX3-204ENST00000562706 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
TMX3-204ENST00000562706 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
TMX3-204ENST00000562706 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
TMX3-204ENST00000562706 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
TMX3-204ENST00000562706 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
TMX3-204ENST00000562706 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
TMX3-204ENST00000562706 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
TMX3-204ENST00000562706 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
TMX3-204ENST00000562706 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
TMX3-204ENST00000562706 CUX2O14529 1486 aa17.34■□□□□ 0.37
TMX3-204ENST00000562706 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
TMX3-204ENST00000562706 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
TMX3-204ENST00000562706 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
TMX3-204ENST00000562706 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
TMX3-204ENST00000562706 ILDR1Q86SU0 546 aaPredicted RBP17.07■□□□□ 0.32
TMX3-204ENST00000562706 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
TMX3-204ENST00000562706 NACADO15069 1562 aa16.97■□□□□ 0.31
TMX3-204ENST00000562706 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
TMX3-204ENST00000562706 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
TMX3-204ENST00000562706 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
TMX3-204ENST00000562706 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
TMX3-204ENST00000562706 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
TMX3-204ENST00000562706 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
TMX3-204ENST00000562706 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
TMX3-204ENST00000562706 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
TMX3-204ENST00000562706 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
TMX3-204ENST00000562706 RNF39Q9H2S5 420 aa16.54■□□□□ 0.24
TMX3-204ENST00000562706 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
TMX3-204ENST00000562706 KCNA4P22459 653 aa16.33■□□□□ 0.2
TMX3-204ENST00000562706 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
TMX3-204ENST00000562706 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
TMX3-204ENST00000562706 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.2
TMX3-204ENST00000562706 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.2
TMX3-204ENST00000562706 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.2
TMX3-204ENST00000562706 THOC2Q8NI27 1593 aaKnown RBP16.24■□□□□ 0.19
TMX3-204ENST00000562706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
TMX3-204ENST00000562706 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
TMX3-204ENST00000562706 NESP48681 1621 aa16.13■□□□□ 0.17
TMX3-204ENST00000562706 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
TMX3-204ENST00000562706 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
TMX3-204ENST00000562706 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
TMX3-204ENST00000562706 SCRIBQ14160 1630 aa16■□□□□ 0.15
TMX3-204ENST00000562706 SOCS7O14512 581 aa15.99■□□□□ 0.15
TMX3-204ENST00000562706 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
TMX3-204ENST00000562706 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
TMX3-204ENST00000562706 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
TMX3-204ENST00000562706 ILDR2Q71H61 639 aa15.84■□□□□ 0.13
TMX3-204ENST00000562706 FBXO41Q8TF61 875 aa15.84■□□□□ 0.13
TMX3-204ENST00000562706 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
TMX3-204ENST00000562706 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
TMX3-204ENST00000562706 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
TMX3-204ENST00000562706 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
TMX3-204ENST00000562706 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.11
TMX3-204ENST00000562706 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
TMX3-204ENST00000562706 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
TMX3-204ENST00000562706 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
TMX3-204ENST00000562706 WDR62O43379 1518 aa15.6■□□□□ 0.09
TMX3-204ENST00000562706 CAPN15O75808 1086 aa15.6■□□□□ 0.09
TMX3-204ENST00000562706 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
TMX3-204ENST00000562706 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
TMX3-204ENST00000562706 DISP3Q9P2K9 1392 aa15.51■□□□□ 0.07
TMX3-204ENST00000562706 DSG3P32926 999 aa15.51■□□□□ 0.07
TMX3-204ENST00000562706 HECW2Q9P2P5 1572 aa15.45■□□□□ 0.06
TMX3-204ENST00000562706 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
TMX3-204ENST00000562706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
TMX3-204ENST00000562706 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
TMX3-204ENST00000562706 APLP2Q06481 763 aa15.42■□□□□ 0.06
TMX3-204ENST00000562706 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
TMX3-204ENST00000562706 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
TMX3-204ENST00000562706 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
TMX3-204ENST00000562706 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
TMX3-204ENST00000562706 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
TMX3-204ENST00000562706 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
TMX3-204ENST00000562706 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
TMX3-204ENST00000562706 ABCB7O75027 752 aa15.26■□□□□ 0.03
TMX3-204ENST00000562706 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
TMX3-204ENST00000562706 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
TMX3-204ENST00000562706 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
TMX3-204ENST00000562706 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
TMX3-204ENST00000562706 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TMX3-204ENST00000562706 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
TMX3-204ENST00000562706 CHD1O14646 1710 aa15.13■□□□□ 0.01
TMX3-204ENST00000562706 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
TMX3-204ENST00000562706 SPATA31D1Q6ZQQ2 1576 aa15.08■□□□□ 0
TMX3-204ENST00000562706 FBLN2P98095 1184 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms