RNA–Protein interactions for RNA: ENST00000564008.5

TMX3-205, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 3

Gene TMX3, Length 530 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-205ENST00000564008 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
TMX3-205ENST00000564008 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
TMX3-205ENST00000564008 ABCC9O60706 1549 aa30■■■□□ 2.39
TMX3-205ENST00000564008 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
TMX3-205ENST00000564008 RB1CC1Q8TDY2 1594 aa28.78■■■□□ 2.2
TMX3-205ENST00000564008 NACADO15069 1562 aa28.72■■■□□ 2.19
TMX3-205ENST00000564008 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
TMX3-205ENST00000564008 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
TMX3-205ENST00000564008 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
TMX3-205ENST00000564008 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
TMX3-205ENST00000564008 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
TMX3-205ENST00000564008 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
TMX3-205ENST00000564008 SCRIBQ14160 1630 aa27.77■■■□□ 2.04
TMX3-205ENST00000564008 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
TMX3-205ENST00000564008 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
TMX3-205ENST00000564008 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
TMX3-205ENST00000564008 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
TMX3-205ENST00000564008 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
TMX3-205ENST00000564008 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
TMX3-205ENST00000564008 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
TMX3-205ENST00000564008 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
TMX3-205ENST00000564008 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
TMX3-205ENST00000564008 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
TMX3-205ENST00000564008 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
TMX3-205ENST00000564008 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
TMX3-205ENST00000564008 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
TMX3-205ENST00000564008 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
TMX3-205ENST00000564008 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
TMX3-205ENST00000564008 WIZO95785 1651 aa26■■□□□ 1.75
TMX3-205ENST00000564008 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
TMX3-205ENST00000564008 NESP48681 1621 aa25.88■■□□□ 1.73
TMX3-205ENST00000564008 LAMC3Q9Y6N6 1575 aa25.81■■□□□ 1.72
TMX3-205ENST00000564008 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
TMX3-205ENST00000564008 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
TMX3-205ENST00000564008 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
TMX3-205ENST00000564008 CUX2O14529 1486 aa25.67■■□□□ 1.7
TMX3-205ENST00000564008 CFTRP13569 1480 aa25.57■■□□□ 1.68
TMX3-205ENST00000564008 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
TMX3-205ENST00000564008 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
TMX3-205ENST00000564008 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
TMX3-205ENST00000564008 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
TMX3-205ENST00000564008 KIF21AQ7Z4S6 1674 aa25.44■■□□□ 1.66
TMX3-205ENST00000564008 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
TMX3-205ENST00000564008 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
TMX3-205ENST00000564008 WDR62O43379 1518 aa25.3■■□□□ 1.64
TMX3-205ENST00000564008 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
TMX3-205ENST00000564008 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
TMX3-205ENST00000564008 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
TMX3-205ENST00000564008 ABCC8Q09428 1581 aa25.06■■□□□ 1.6
TMX3-205ENST00000564008 TOPBP1Q92547 1522 aa25■■□□□ 1.59
TMX3-205ENST00000564008 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
TMX3-205ENST00000564008 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
TMX3-205ENST00000564008 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
TMX3-205ENST00000564008 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
TMX3-205ENST00000564008 SOGA1O94964 1423 aa24.76■■□□□ 1.55
TMX3-205ENST00000564008 CUX1P39880 1505 aa24.74■■□□□ 1.55
TMX3-205ENST00000564008 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.55
TMX3-205ENST00000564008 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
TMX3-205ENST00000564008 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
TMX3-205ENST00000564008 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
TMX3-205ENST00000564008 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.544e-8■■■■□ 24.7
TMX3-205ENST00000564008 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
TMX3-205ENST00000564008 EIF4G3O43432 1585 aaKnown RBP24.62■■□□□ 1.53
TMX3-205ENST00000564008 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
TMX3-205ENST00000564008 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
TMX3-205ENST00000564008 FBLN2P98095 1184 aa24.48■■□□□ 1.51
TMX3-205ENST00000564008 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
TMX3-205ENST00000564008 ABCA10Q8WWZ4 1543 aa24.47■■□□□ 1.51
TMX3-205ENST00000564008 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
TMX3-205ENST00000564008 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
TMX3-205ENST00000564008 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
TMX3-205ENST00000564008 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
TMX3-205ENST00000564008 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
TMX3-205ENST00000564008 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
TMX3-205ENST00000564008 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.5
TMX3-205ENST00000564008 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
TMX3-205ENST00000564008 SYNJ2O15056 1496 aa24.31■■□□□ 1.48
TMX3-205ENST00000564008 CHD1O14646 1710 aa24.24■■□□□ 1.47
TMX3-205ENST00000564008 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
TMX3-205ENST00000564008 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
TMX3-205ENST00000564008 ERICH3Q5RHP9 1530 aa24.17■■□□□ 1.46
TMX3-205ENST00000564008 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
TMX3-205ENST00000564008 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
TMX3-205ENST00000564008 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
TMX3-205ENST00000564008 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
TMX3-205ENST00000564008 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
TMX3-205ENST00000564008 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
TMX3-205ENST00000564008 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
TMX3-205ENST00000564008 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
TMX3-205ENST00000564008 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
TMX3-205ENST00000564008 IGF1RP08069 1367 aa24.04■■□□□ 1.44
TMX3-205ENST00000564008 CYB5RLQ6IPT4 315 aa24.03■■□□□ 1.44
TMX3-205ENST00000564008 NUP160Q12769 1436 aa24.01■■□□□ 1.43
TMX3-205ENST00000564008 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
TMX3-205ENST00000564008 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
TMX3-205ENST00000564008 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
TMX3-205ENST00000564008 CUL7Q14999 1698 aa23.87■■□□□ 1.41
TMX3-205ENST00000564008 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
TMX3-205ENST00000564008 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
TMX3-205ENST00000564008 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms