RNA–Protein interactions for RNA: ENST00000239944.6

SERP1-201, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERP1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-201ENST00000239944 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
SERP1-201ENST00000239944 SHROOM4Q9ULL8 1493 aa26.05■■□□□ 1.76
SERP1-201ENST00000239944 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
SERP1-201ENST00000239944 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
SERP1-201ENST00000239944 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.6
SERP1-201ENST00000239944 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
SERP1-201ENST00000239944 HRCP23327 699 aa24.97■■□□□ 1.59
SERP1-201ENST00000239944 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
SERP1-201ENST00000239944 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
SERP1-201ENST00000239944 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
SERP1-201ENST00000239944 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
SERP1-201ENST00000239944 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
SERP1-201ENST00000239944 ABCC9O60706 1549 aa24.31■■□□□ 1.48
SERP1-201ENST00000239944 DCAF1Q9Y4B6 1507 aa24.27■■□□□ 1.48
SERP1-201ENST00000239944 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
SERP1-201ENST00000239944 TRIM26Q12899 539 aaPredicted RBP23.96■■□□□ 1.43
SERP1-201ENST00000239944 FAM9AQ8IZU1 332 aaPredicted RBP23.91■■□□□ 1.42
SERP1-201ENST00000239944 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
SERP1-201ENST00000239944 NACADO15069 1562 aa23.74■■□□□ 1.39
SERP1-201ENST00000239944 TRIM41Q8WV44 630 aa23.64■■□□□ 1.38
SERP1-201ENST00000239944 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
SERP1-201ENST00000239944 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
SERP1-201ENST00000239944 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
SERP1-201ENST00000239944 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
SERP1-201ENST00000239944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
SERP1-201ENST00000239944 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
SERP1-201ENST00000239944 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
SERP1-201ENST00000239944 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.3
SERP1-201ENST00000239944 CCER1Q8TC90 406 aaPredicted RBP23.11■■□□□ 1.29
SERP1-201ENST00000239944 NEUROD1Q13562 356 aa23.09■■□□□ 1.29
SERP1-201ENST00000239944 UNC13AQ9UPW8 1703 aa23.09■■□□□ 1.29
SERP1-201ENST00000239944 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
SERP1-201ENST00000239944 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
SERP1-201ENST00000239944 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.27
SERP1-201ENST00000239944 GTF3C3Q9Y5Q9 886 aa22.9■■□□□ 1.26
SERP1-201ENST00000239944 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
SERP1-201ENST00000239944 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
SERP1-201ENST00000239944 WIZO95785 1651 aa22.87■■□□□ 1.25
SERP1-201ENST00000239944 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.24
SERP1-201ENST00000239944 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
SERP1-201ENST00000239944 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
SERP1-201ENST00000239944 ABCC8Q09428 1581 aa22.64■■□□□ 1.21
SERP1-201ENST00000239944 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
SERP1-201ENST00000239944 CENPBP07199 599 aaPredicted RBP22.6■■□□□ 1.21
SERP1-201ENST00000239944 SOGA1O94964 1423 aa22.55■■□□□ 1.2
SERP1-201ENST00000239944 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
SERP1-201ENST00000239944 CEP162Q5TB80 1403 aa22.52■■□□□ 1.2
SERP1-201ENST00000239944 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
SERP1-201ENST00000239944 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
SERP1-201ENST00000239944 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
SERP1-201ENST00000239944 ZNF316A6NFI3 1004 aaPredicted RBP22.45■■□□□ 1.18
SERP1-201ENST00000239944 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
SERP1-201ENST00000239944 MIER1Q8N108 512 aa22.44■■□□□ 1.18
SERP1-201ENST00000239944 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
SERP1-201ENST00000239944 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
SERP1-201ENST00000239944 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
SERP1-201ENST00000239944 WRNQ14191 1432 aaPredicted RBP eCLIP22.33■■□□□ 1.16
SERP1-201ENST00000239944 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
SERP1-201ENST00000239944 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
SERP1-201ENST00000239944 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
SERP1-201ENST00000239944 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
SERP1-201ENST00000239944 GOLGA3Q08378 1498 aa22.04■■□□□ 1.12
SERP1-201ENST00000239944 NCAPD3P42695 1498 aa21.98■■□□□ 1.11
SERP1-201ENST00000239944 CLIP1P30622 1438 aa21.98■■□□□ 1.11
SERP1-201ENST00000239944 APLP2Q06481 763 aa21.96■■□□□ 1.11
SERP1-201ENST00000239944 EEA1Q15075 1411 aa21.91■■□□□ 1.1
SERP1-201ENST00000239944 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
SERP1-201ENST00000239944 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
SERP1-201ENST00000239944 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
SERP1-201ENST00000239944 ITGAEP38570 1179 aa21.83■■□□□ 1.09
SERP1-201ENST00000239944 KCNH8Q96L42 1107 aa21.83■■□□□ 1.09
SERP1-201ENST00000239944 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
SERP1-201ENST00000239944 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.08
SERP1-201ENST00000239944 VPS8Q8N3P4 1428 aa21.82■■□□□ 1.08
SERP1-201ENST00000239944 SUPT16HQ9Y5B9 1047 aaKnown RBP21.82■■□□□ 1.08
SERP1-201ENST00000239944 CC2D2AQ9P2K1 1620 aa21.81■■□□□ 1.08
SERP1-201ENST00000239944 MYT1Q01538 1121 aa21.8■■□□□ 1.08
SERP1-201ENST00000239944 DHX57Q6P158 1386 aaKnown RBP21.74■■□□□ 1.07
SERP1-201ENST00000239944 KIF21BO75037 1637 aa21.71■■□□□ 1.07
SERP1-201ENST00000239944 BCANQ96GW7 911 aa21.71■■□□□ 1.07
SERP1-201ENST00000239944 CFTRP13569 1480 aa21.62■■□□□ 1.05
SERP1-201ENST00000239944 TSHZ2Q9NRE2 1034 aa21.61■■□□□ 1.05
SERP1-201ENST00000239944 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
SERP1-201ENST00000239944 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
SERP1-201ENST00000239944 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
SERP1-201ENST00000239944 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
SERP1-201ENST00000239944 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
SERP1-201ENST00000239944 CUX1P39880 1505 aa21.49■■□□□ 1.03
SERP1-201ENST00000239944 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
SERP1-201ENST00000239944 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
SERP1-201ENST00000239944 NESP48681 1621 aa21.43■■□□□ 1.02
SERP1-201ENST00000239944 FKBP8Q14318 412 aa21.42■■□□□ 1.02
SERP1-201ENST00000239944 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
SERP1-201ENST00000239944 CLSPNQ9HAW4 1339 aa21.42■■□□□ 1.02
SERP1-201ENST00000239944 CCNB3Q8WWL7 1395 aa21.37■■□□□ 1.01
SERP1-201ENST00000239944 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
SERP1-201ENST00000239944 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
SERP1-201ENST00000239944 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
SERP1-201ENST00000239944 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
SERP1-201ENST00000239944 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms