RNA–Protein interactions for RNA: ENST00000467048.1

RFT1-203, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-203ENST00000467048 NISCHQ9Y2I1 1504 aa41.6■■■■■ 4.25
RFT1-203ENST00000467048 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
RFT1-203ENST00000467048 ABCC9O60706 1549 aa36.18■■■■□ 3.38
RFT1-203ENST00000467048 DCAF8L2P0C7V8 631 aa34.8■■■■□ 3.16
RFT1-203ENST00000467048 RB1CC1Q8TDY2 1594 aa34.74■■■■□ 3.15
RFT1-203ENST00000467048 NACADO15069 1562 aa34.7■■■■□ 3.15
RFT1-203ENST00000467048 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
RFT1-203ENST00000467048 MYO15BQ96JP2 1530 aa34.47■■■■□ 3.11
RFT1-203ENST00000467048 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
RFT1-203ENST00000467048 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
RFT1-203ENST00000467048 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
RFT1-203ENST00000467048 SCRIBQ14160 1630 aa33.8■■■■□ 3
RFT1-203ENST00000467048 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
RFT1-203ENST00000467048 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
RFT1-203ENST00000467048 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
RFT1-203ENST00000467048 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
RFT1-203ENST00000467048 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
RFT1-203ENST00000467048 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
RFT1-203ENST00000467048 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
RFT1-203ENST00000467048 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
RFT1-203ENST00000467048 MROH2BQ7Z745 1585 aa32.1■■■□□ 2.73
RFT1-203ENST00000467048 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
RFT1-203ENST00000467048 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
RFT1-203ENST00000467048 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
RFT1-203ENST00000467048 PEG3Q9GZU2 1588 aa31.92■■■□□ 2.7
RFT1-203ENST00000467048 HMGXB3Q12766 1538 aa31.89■■■□□ 2.7
RFT1-203ENST00000467048 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
RFT1-203ENST00000467048 WIZO95785 1651 aa31.76■■■□□ 2.67
RFT1-203ENST00000467048 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
RFT1-203ENST00000467048 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
RFT1-203ENST00000467048 NESP48681 1621 aa31.32■■■□□ 2.6
RFT1-203ENST00000467048 LAMC3Q9Y6N6 1575 aa31.17■■■□□ 2.58
RFT1-203ENST00000467048 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
RFT1-203ENST00000467048 CADPSQ9ULU8 1353 aa31.12■■■□□ 2.57
RFT1-203ENST00000467048 CCDC88BA6NC98 1476 aa31.04■■■□□ 2.56
RFT1-203ENST00000467048 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
RFT1-203ENST00000467048 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
RFT1-203ENST00000467048 CFTRP13569 1480 aa30.95■■■□□ 2.54
RFT1-203ENST00000467048 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
RFT1-203ENST00000467048 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
RFT1-203ENST00000467048 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
RFT1-203ENST00000467048 CUX2O14529 1486 aa30.76■■■□□ 2.51
RFT1-203ENST00000467048 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
RFT1-203ENST00000467048 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
RFT1-203ENST00000467048 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
RFT1-203ENST00000467048 WDR62O43379 1518 aa30.57■■■□□ 2.49
RFT1-203ENST00000467048 URB2Q14146 1524 aaKnown RBP30.49■■■□□ 2.47
RFT1-203ENST00000467048 TOPBP1Q92547 1522 aa30.31■■■□□ 2.44
RFT1-203ENST00000467048 DNMBPQ6XZF7 1577 aa30.26■■■□□ 2.43
RFT1-203ENST00000467048 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
RFT1-203ENST00000467048 CUX1P39880 1505 aa30.12■■■□□ 2.41
RFT1-203ENST00000467048 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
RFT1-203ENST00000467048 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
RFT1-203ENST00000467048 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
RFT1-203ENST00000467048 ZNF608Q9ULD9 1512 aaPredicted RBP29.99■■■□□ 2.39
RFT1-203ENST00000467048 RAD54L2Q9Y4B4 1467 aa29.95■■■□□ 2.39
RFT1-203ENST00000467048 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
RFT1-203ENST00000467048 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
RFT1-203ENST00000467048 SOGA1O94964 1423 aa29.91■■■□□ 2.38
RFT1-203ENST00000467048 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
RFT1-203ENST00000467048 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
RFT1-203ENST00000467048 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
RFT1-203ENST00000467048 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
RFT1-203ENST00000467048 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.36
RFT1-203ENST00000467048 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
RFT1-203ENST00000467048 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
RFT1-203ENST00000467048 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
RFT1-203ENST00000467048 ABCA10Q8WWZ4 1543 aa29.68■■■□□ 2.34
RFT1-203ENST00000467048 ABCA5Q8WWZ7 1642 aa29.57■■■□□ 2.32
RFT1-203ENST00000467048 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
RFT1-203ENST00000467048 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
RFT1-203ENST00000467048 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
RFT1-203ENST00000467048 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
RFT1-203ENST00000467048 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
RFT1-203ENST00000467048 FBLN2P98095 1184 aa29.46■■■□□ 2.31
RFT1-203ENST00000467048 MAGI1Q96QZ7 1491 aaPredicted RBP29.46■■■□□ 2.31
RFT1-203ENST00000467048 CHD1O14646 1710 aa29.45■■■□□ 2.31
RFT1-203ENST00000467048 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
RFT1-203ENST00000467048 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
RFT1-203ENST00000467048 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
RFT1-203ENST00000467048 ADAMTS12P58397 1594 aa29.3■■■□□ 2.28
RFT1-203ENST00000467048 KIF27Q86VH2 1401 aa29.28■■■□□ 2.28
RFT1-203ENST00000467048 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
RFT1-203ENST00000467048 FHAD1B1AJZ9 1412 aa29.22■■■□□ 2.27
RFT1-203ENST00000467048 GRIN2AQ12879 1464 aa29.19■■■□□ 2.26
RFT1-203ENST00000467048 IGF1RP08069 1367 aa29.15■■■□□ 2.26
RFT1-203ENST00000467048 CLASP1Q7Z460 1538 aa29.14■■■□□ 2.25
RFT1-203ENST00000467048 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
RFT1-203ENST00000467048 CUL7Q14999 1698 aa29.06■■■□□ 2.24
RFT1-203ENST00000467048 CEP170Q5SW79 1584 aa29.06■■■□□ 2.24
RFT1-203ENST00000467048 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
RFT1-203ENST00000467048 RIMBP3CA6NJZ7 1639 aa29.05■■■□□ 2.24
RFT1-203ENST00000467048 RIMBP3BA6NNM3 1639 aa29.05■■■□□ 2.24
RFT1-203ENST00000467048 RIMBP3Q9UFD9 1639 aa29.05■■■□□ 2.24
RFT1-203ENST00000467048 NUP160Q12769 1436 aa29.04■■■□□ 2.24
RFT1-203ENST00000467048 CARMIL1Q5VZK9 1371 aa28.99■■■□□ 2.23
RFT1-203ENST00000467048 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
RFT1-203ENST00000467048 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
RFT1-203ENST00000467048 RAPGEF2Q9Y4G8 1499 aa28.82■■■□□ 2.2
RFT1-203ENST00000467048 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms