RNA–Protein interactions for RNA: ENST00000580785.1

TMX3-214, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 5

Gene TMX3, Length 675 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-214ENST00000580785 AEBP2Q6ZN18 517 aaPredicted RBP34.58■■■■□ 3.13
TMX3-214ENST00000580785 CHIC1Q5VXU3 224 aa32.67■■■□□ 2.82
TMX3-214ENST00000580785 SENP3Q9H4L4 574 aaPredicted RBP29.45■■■□□ 2.31
TMX3-214ENST00000580785 PHF23Q9BUL5 403 aaPredicted RBP29.06■■■□□ 2.24
TMX3-214ENST00000580785 FOXD1Q16676 465 aa27.51■■□□□ 1.99
TMX3-214ENST00000580785 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
TMX3-214ENST00000580785 MSH5O43196 834 aa25.74■■□□□ 1.71
TMX3-214ENST00000580785 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
TMX3-214ENST00000580785 PIAS4Q8N2W9 510 aaPredicted RBP25.61■■□□□ 1.69
TMX3-214ENST00000580785 ADRA2BP18089 450 aa25.5■■□□□ 1.67
TMX3-214ENST00000580785 POTEDQ86YR6 584 aa25.41■■□□□ 1.66
TMX3-214ENST00000580785 MAPK8IP2Q13387 824 aaPredicted RBP23.48■■□□□ 1.35
TMX3-214ENST00000580785 DMRT2Q9Y5R5 561 aa23.37■■□□□ 1.33
TMX3-214ENST00000580785 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
TMX3-214ENST00000580785 PPP4R3CPQ6ZMV5 832 aa22.79■■□□□ 1.24
TMX3-214ENST00000580785 HOXD11P31277 338 aaPredicted RBP22.47■■□□□ 1.19
TMX3-214ENST00000580785 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
TMX3-214ENST00000580785 DCAF8L1A6NGE4 600 aa22.28■■□□□ 1.16
TMX3-214ENST00000580785 RNF216Q9NWF9 866 aaPredicted RBP22.24■■□□□ 1.15
TMX3-214ENST00000580785 CACNB1Q02641 598 aaPredicted RBP22.14■■□□□ 1.13
TMX3-214ENST00000580785 RNF39Q9H2S5 420 aa22■■□□□ 1.11
TMX3-214ENST00000580785 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
TMX3-214ENST00000580785 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
TMX3-214ENST00000580785 C1QBPQ07021 282 aaKnown RBP21.64■■□□□ 1.05
TMX3-214ENST00000580785 NPM3O75607 178 aaKnown RBP21.57■■□□□ 1.04
TMX3-214ENST00000580785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.31■■□□□ 1
TMX3-214ENST00000580785 KCNA4P22459 653 aa21.02■□□□□ 0.96
TMX3-214ENST00000580785 U3KPZ7 1027 aaPredicted RBP20.93■□□□□ 0.94
TMX3-214ENST00000580785 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
TMX3-214ENST00000580785 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
TMX3-214ENST00000580785 CAPN15O75808 1086 aa20.55■□□□□ 0.88
TMX3-214ENST00000580785 DSG3P32926 999 aa20.55■□□□□ 0.88
TMX3-214ENST00000580785 APLP2Q06481 763 aa20.23■□□□□ 0.83
TMX3-214ENST00000580785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
TMX3-214ENST00000580785 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
TMX3-214ENST00000580785 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
TMX3-214ENST00000580785 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
TMX3-214ENST00000580785 SAMD1Q6SPF0 538 aaPredicted RBP20.1■□□□□ 0.81
TMX3-214ENST00000580785 ABCB7O75027 752 aa20.09■□□□□ 0.81
TMX3-214ENST00000580785 MYCNP04198 464 aaPredicted RBP19.92■□□□□ 0.78
TMX3-214ENST00000580785 POTEHQ6S545 545 aa19.85■□□□□ 0.77
TMX3-214ENST00000580785 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
TMX3-214ENST00000580785 POLA2Q14181 598 aa19.65■□□□□ 0.74
TMX3-214ENST00000580785 FOXD4L1Q9NU39 408 aa19.64■□□□□ 0.73
TMX3-214ENST00000580785 RBM42Q9BTD8 480 aaKnown RBP19.55■□□□□ 0.72
TMX3-214ENST00000580785 ATF5Q9Y2D1 282 aaPredicted RBP19.53■□□□□ 0.72
TMX3-214ENST00000580785 ZBTB22O15209 634 aa19.37■□□□□ 0.69
TMX3-214ENST00000580785 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
TMX3-214ENST00000580785 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
TMX3-214ENST00000580785 AKT1S1Q96B36 256 aa19.1■□□□□ 0.65
TMX3-214ENST00000580785 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
TMX3-214ENST00000580785 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
TMX3-214ENST00000580785 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
TMX3-214ENST00000580785 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
TMX3-214ENST00000580785 PIP4P2Q8N4L2 257 aa18.74■□□□□ 0.59
TMX3-214ENST00000580785 FBLN2P98095 1184 aa18.67■□□□□ 0.58
TMX3-214ENST00000580785 SPDYE2BA6NHP3 402 aa18.64■□□□□ 0.57
TMX3-214ENST00000580785 SPDYE6P0CI01 402 aa18.64■□□□□ 0.57
TMX3-214ENST00000580785 SPDYE2Q495Y8 402 aa18.64■□□□□ 0.57
TMX3-214ENST00000580785 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
TMX3-214ENST00000580785 MKRN4PQ13434 485 aaPredicted RBP18.63■□□□□ 0.57
TMX3-214ENST00000580785 SP7Q8TDD2 431 aaPredicted RBP18.55■□□□□ 0.56
TMX3-214ENST00000580785 SSUH2Q9Y2M2 353 aa18.43■□□□□ 0.54
TMX3-214ENST00000580785 HAX1O00165 279 aa18.37■□□□□ 0.53
TMX3-214ENST00000580785 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
TMX3-214ENST00000580785 SPDYE1Q8NFV5 336 aaPredicted RBP18.33■□□□□ 0.52
TMX3-214ENST00000580785 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
TMX3-214ENST00000580785 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
TMX3-214ENST00000580785 EVX2Q03828 476 aa18.23■□□□□ 0.51
TMX3-214ENST00000580785 PRKAR2AP13861 404 aaKnown RBP18.22■□□□□ 0.51
TMX3-214ENST00000580785 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMX3-214ENST00000580785 C19orf67A6NJJ6 358 aa18.03■□□□□ 0.48
TMX3-214ENST00000580785 CHADLQ6NUI6 762 aa17.99■□□□□ 0.47
TMX3-214ENST00000580785 PRR29P0C7W0 189 aa17.97■□□□□ 0.47
TMX3-214ENST00000580785 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
TMX3-214ENST00000580785 GABBR2O75899 941 aa17.78■□□□□ 0.44
TMX3-214ENST00000580785 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
TMX3-214ENST00000580785 CD44P16070 742 aaKnown RBP17.63■□□□□ 0.41
TMX3-214ENST00000580785 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
TMX3-214ENST00000580785 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
TMX3-214ENST00000580785 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
TMX3-214ENST00000580785 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
TMX3-214ENST00000580785 CLCN6P51797 869 aa17.43■□□□□ 0.38
TMX3-214ENST00000580785 LHX8Q68G74 356 aa17.39■□□□□ 0.37
TMX3-214ENST00000580785 ZNF579Q8NAF0 562 aaKnown RBP17.39■□□□□ 0.37
TMX3-214ENST00000580785 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
TMX3-214ENST00000580785 MNX1P50219 401 aaPredicted RBP17.29■□□□□ 0.36
TMX3-214ENST00000580785 PROM2Q8N271 834 aa17.26■□□□□ 0.35
TMX3-214ENST00000580785 DCBLD2Q96PD2 775 aa17.2■□□□□ 0.34
TMX3-214ENST00000580785 GALR2O43603 387 aaPredicted RBP17.18■□□□□ 0.34
TMX3-214ENST00000580785 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMX3-214ENST00000580785 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
TMX3-214ENST00000580785 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
TMX3-214ENST00000580785 MS4A3Q96HJ5 214 aa16.9■□□□□ 0.3
TMX3-214ENST00000580785 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
TMX3-214ENST00000580785 POTEB2H3BUK9 544 aa16.87■□□□□ 0.29
TMX3-214ENST00000580785 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
TMX3-214ENST00000580785 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
TMX3-214ENST00000580785 ASTLQ6HA08 431 aaPredicted RBP16.83■□□□□ 0.28
TMX3-214ENST00000580785 OTUD5Q96G74 571 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms