RNA–Protein interactions for RNA: ENST00000599256.5

UBA52-212, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

TSL 2

Gene UBA52, Length 927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-212ENST00000599256 NISCHQ9Y2I1 1504 aa57.71■■■■■ 6.83
UBA52-212ENST00000599256 CCDC180Q9P1Z9 1646 aa51.52■■■■■ 5.84
UBA52-212ENST00000599256 ABCC9O60706 1549 aa50.84■■■■■ 5.73
UBA52-212ENST00000599256 RB1CC1Q8TDY2 1594 aa48.75■■■■■ 5.39
UBA52-212ENST00000599256 NACADO15069 1562 aa48.57■■■■■ 5.37
UBA52-212ENST00000599256 DCAF8L2P0C7V8 631 aa48.45■■■■■ 5.35
UBA52-212ENST00000599256 MYO15BQ96JP2 1530 aa48.15■■■■■ 5.3
UBA52-212ENST00000599256 ZCCHC6Q5VYS8 1495 aaKnown RBP47.97■■■■■ 5.27
UBA52-212ENST00000599256 DCAF1Q9Y4B6 1507 aa47.76■■■■■ 5.24
UBA52-212ENST00000599256 UNC13AQ9UPW8 1703 aa47.52■■■■■ 5.2
UBA52-212ENST00000599256 PABPN1Q86U42 306 aaKnown RBP eCLIP47.43■■■■■ 5.18
UBA52-212ENST00000599256 BICRAQ9NZM4 1560 aa47.21■■■■■ 5.15
UBA52-212ENST00000599256 DNAJC5BQ9UF47 199 aa47.06■■■■■ 5.12
UBA52-212ENST00000599256 SCRIBQ14160 1630 aa46.93■■■■■ 5.1
UBA52-212ENST00000599256 SHROOM4Q9ULL8 1493 aa46.79■■■■■ 5.08
UBA52-212ENST00000599256 EIF4G1Q04637 1599 aaKnown RBP46.04■■■■■ 4.96
UBA52-212ENST00000599256 CC2D2AQ9P2K1 1620 aa45.95■■■■■ 4.95
UBA52-212ENST00000599256 CECR2Q9BXF3 1484 aa45.76■■■■■ 4.92
UBA52-212ENST00000599256 SMARCA4P51532 1647 aa44.86■■■■■ 4.77
UBA52-212ENST00000599256 NCAPD3P42695 1498 aa44.83■■■■■ 4.77
UBA52-212ENST00000599256 BAZ1AQ9NRL2 1556 aaPredicted RBP44.79■■■■■ 4.76
UBA52-212ENST00000599256 ATAD2BQ9ULI0 1458 aa44.76■■■■■ 4.76
UBA52-212ENST00000599256 SMARCA2P51531 1590 aa44.71■■■■■ 4.75
UBA52-212ENST00000599256 HMGXB3Q12766 1538 aa44.55■■■■■ 4.72
UBA52-212ENST00000599256 PEG3Q9GZU2 1588 aa44.45■■■■■ 4.71
UBA52-212ENST00000599256 MROH2BQ7Z745 1585 aa44.44■■■■■ 4.71
UBA52-212ENST00000599256 BAZ1BQ9UIG0 1483 aaKnown RBP44.39■■■■■ 4.7
UBA52-212ENST00000599256 WIZO95785 1651 aa43.92■■■■■ 4.62
UBA52-212ENST00000599256 ERCC6Q03468 1493 aa43.9■■■■■ 4.62
UBA52-212ENST00000599256 NESP48681 1621 aa43.84■■■■■ 4.61
UBA52-212ENST00000599256 RSF1Q96T23 1441 aaPredicted RBP43.79■■■■■ 4.6
UBA52-212ENST00000599256 LAMC3Q9Y6N6 1575 aa43.71■■■■■ 4.59
UBA52-212ENST00000599256 CUX2O14529 1486 aa43.62■■■■■ 4.57
UBA52-212ENST00000599256 CADPSQ9ULU8 1353 aa43.51■■■■■ 4.56
UBA52-212ENST00000599256 TOP2AP11388 1531 aaKnown RBP43.48■■■■■ 4.55
UBA52-212ENST00000599256 PDS5BQ9NTI5 1447 aa43.48■■■■■ 4.55
UBA52-212ENST00000599256 KIF21AQ7Z4S6 1674 aa43.29■■■■■ 4.52
UBA52-212ENST00000599256 THOC2Q8NI27 1593 aaKnown RBP43.27■■■■■ 4.52
UBA52-212ENST00000599256 CFTRP13569 1480 aa43.13■■■■■ 4.5
UBA52-212ENST00000599256 MRC2Q9UBG0 1479 aa43.02■■■■■ 4.48
UBA52-212ENST00000599256 FANCD2Q9BXW9 1451 aa42.99■■■■■ 4.47
UBA52-212ENST00000599256 CEP164Q9UPV0 1460 aa42.99■■■■■ 4.47
UBA52-212ENST00000599256 CCDC88BA6NC98 1476 aa42.96■■■■■ 4.47
UBA52-212ENST00000599256 DNAJC5Q9H3Z4 198 aa42.93■■■■■ 4.46
UBA52-212ENST00000599256 WDR62O43379 1518 aa42.87■■■■■ 4.45
UBA52-212ENST00000599256 PRDM2Q13029 1718 aa42.71■■■■■ 4.43
UBA52-212ENST00000599256 URB2Q14146 1524 aaKnown RBP42.56■■■■■ 4.4
UBA52-212ENST00000599256 SUPT5HO00267 1087 aaKnown RBP42.35■■■■■ 4.37
UBA52-212ENST00000599256 ABCC8Q09428 1581 aa42.27■■■■■ 4.36
UBA52-212ENST00000599256 TOPBP1Q92547 1522 aa42.23■■■■■ 4.35
UBA52-212ENST00000599256 DNMBPQ6XZF7 1577 aa42.15■■■■■ 4.34
UBA52-212ENST00000599256 IFT140Q96RY7 1462 aa42.12■■■■■ 4.33
UBA52-212ENST00000599256 ZNF608Q9ULD9 1512 aaPredicted RBP41.91■■■■■ 4.3
UBA52-212ENST00000599256 POLA1P09884 1462 aaPredicted RBP41.85■■■■■ 4.29
UBA52-212ENST00000599256 TARBP1Q13395 1621 aaKnown RBP41.79■■■■■ 4.28
UBA52-212ENST00000599256 OSCARQ8IYS5 282 aa41.76■■■■■ 4.28
UBA52-212ENST00000599256 EIF4G3O43432 1585 aaKnown RBP41.73■■■■■ 4.27
UBA52-212ENST00000599256 CUX1P39880 1505 aa41.72■■■■■ 4.27
UBA52-212ENST00000599256 SOGA1O94964 1423 aa41.69■■■■■ 4.27
UBA52-212ENST00000599256 FGD5Q6ZNL6 1462 aa41.67■■■■■ 4.26
UBA52-212ENST00000599256 RAD54L2Q9Y4B4 1467 aa41.65■■■■■ 4.26
UBA52-212ENST00000599256 AQRO60306 1485 aaKnown RBP eCLIP41.64■■■■■ 4.262e-10■■■■■ 30.6
UBA52-212ENST00000599256 TDRD9Q8NDG6 1382 aaKnown RBP41.5■■■■■ 4.23
UBA52-212ENST00000599256 WDR97A6NE52 1622 aa41.5■■■■■ 4.23
UBA52-212ENST00000599256 WRNQ14191 1432 aaPredicted RBP eCLIP41.33■■■■■ 4.212e-16■□□□□ 8
UBA52-212ENST00000599256 FBLN2P98095 1184 aa41.28■■■■■ 4.2
UBA52-212ENST00000599256 GRIN2BQ13224 1484 aa41.28■■■■■ 4.2
UBA52-212ENST00000599256 CHD1O14646 1710 aa41.27■■■■■ 4.2
UBA52-212ENST00000599256 TOP2BQ02880 1626 aa41.26■■■■■ 4.2
UBA52-212ENST00000599256 ABCA10Q8WWZ4 1543 aa41.26■■■■■ 4.2
UBA52-212ENST00000599256 BIVM-ERCC5R4GMW8 1640 aa41.25■■■■■ 4.19
UBA52-212ENST00000599256 SNAPC4Q5SXM2 1469 aa41.24■■■■■ 4.19
UBA52-212ENST00000599256 MAGI1Q96QZ7 1491 aaPredicted RBP41.21■■■■■ 4.19
UBA52-212ENST00000599256 TRIM41Q8WV44 630 aa41.2■■■■■ 4.19
UBA52-212ENST00000599256 GAPVD1Q14C86 1478 aa41.2■■■■■ 4.19
UBA52-212ENST00000599256 SYNJ1O43426 1573 aa41.19■■■■■ 4.18
UBA52-212ENST00000599256 CHMP7Q8WUX9 453 aaPredicted RBP41.11■■■■■ 4.17
UBA52-212ENST00000599256 ABCA5Q8WWZ7 1642 aa41.11■■■■■ 4.17
UBA52-212ENST00000599256 PBRM1Q86U86 1689 aa41.08■■■■■ 4.17
UBA52-212ENST00000599256 RIMBP3CA6NJZ7 1639 aa41.05■■■■■ 4.16
UBA52-212ENST00000599256 RIMBP3BA6NNM3 1639 aa41.05■■■■■ 4.16
UBA52-212ENST00000599256 RIMBP3Q9UFD9 1639 aa41.05■■■■■ 4.16
UBA52-212ENST00000599256 SYNJ2O15056 1496 aa41.05■■■■■ 4.16
UBA52-212ENST00000599256 ARHGEF11O15085 1522 aa41.02■■■■■ 4.16
UBA52-212ENST00000599256 CLASP1Q7Z460 1538 aa40.84■■■■■ 4.13
UBA52-212ENST00000599256 ERICH3Q5RHP9 1530 aa40.77■■■■■ 4.12
UBA52-212ENST00000599256 ADAMTS12P58397 1594 aa40.75■■■■■ 4.11
UBA52-212ENST00000599256 FHAD1B1AJZ9 1412 aa40.72■■■■■ 4.11
UBA52-212ENST00000599256 GRIN2AQ12879 1464 aa40.71■■■■■ 4.11
UBA52-212ENST00000599256 CYB5RLQ6IPT4 315 aa40.69■■■■■ 4.1
UBA52-212ENST00000599256 ARAP1Q96P48 1450 aa40.64■■■■■ 4.1
UBA52-212ENST00000599256 NUP160Q12769 1436 aa40.55■■■■■ 4.08
UBA52-212ENST00000599256 KIF27Q86VH2 1401 aa40.52■■■■■ 4.08
UBA52-212ENST00000599256 CEP170Q5SW79 1584 aa40.49■■■■■ 4.07
UBA52-212ENST00000599256 IGF1RP08069 1367 aa40.39■■■■■ 4.06
UBA52-212ENST00000599256 CUL7Q14999 1698 aa40.31■■■■■ 4.04
UBA52-212ENST00000599256 SHROOM2Q13796 1616 aa40.28■■■■■ 4.04
UBA52-212ENST00000599256 ERCC6L2Q5T890 1561 aa40.2■■■■■ 4.03
UBA52-212ENST00000599256 JPH4Q96JJ6 628 aa40.17■■■■■ 4.02
UBA52-212ENST00000599256 RUSC2Q8N2Y8 1516 aa40.16■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms