RNA–Protein interactions for RNA: ENST00000287844.6

ABCF2-202, Transcript of ATP binding cassette subfamily F member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCF2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-202ENST00000287844 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
ABCF2-202ENST00000287844 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.06
ABCF2-202ENST00000287844 PELP1Q8IZL8 1130 aaKnown RBP15.18■□□□□ 0.02
ABCF2-202ENST00000287844 SLC24A1O60721 1099 aa15.04■□□□□ -0
ABCF2-202ENST00000287844 HRCP23327 699 aa14.88□□□□□ -0.03
ABCF2-202ENST00000287844 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.03
ABCF2-202ENST00000287844 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
ABCF2-202ENST00000287844 MYT1Q01538 1121 aa14.76□□□□□ -0.05
ABCF2-202ENST00000287844 PPARGC1BQ86YN6 1023 aaKnown RBP14.52□□□□□ -0.09
ABCF2-202ENST00000287844 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
ABCF2-202ENST00000287844 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
ABCF2-202ENST00000287844 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
ABCF2-202ENST00000287844 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
ABCF2-202ENST00000287844 SHROOM4Q9ULL8 1493 aa14.17□□□□□ -0.14
ABCF2-202ENST00000287844 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
ABCF2-202ENST00000287844 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
ABCF2-202ENST00000287844 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
ABCF2-202ENST00000287844 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
ABCF2-202ENST00000287844 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
ABCF2-202ENST00000287844 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
ABCF2-202ENST00000287844 ZEB1P37275 1124 aaPredicted RBP13.82□□□□□ -0.2
ABCF2-202ENST00000287844 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
ABCF2-202ENST00000287844 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
ABCF2-202ENST00000287844 CCDC180Q9P1Z9 1646 aa13.76□□□□□ -0.21
ABCF2-202ENST00000287844 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
ABCF2-202ENST00000287844 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
ABCF2-202ENST00000287844 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
ABCF2-202ENST00000287844 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
ABCF2-202ENST00000287844 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
ABCF2-202ENST00000287844 KCNA4P22459 653 aa13.63□□□□□ -0.23
ABCF2-202ENST00000287844 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
ABCF2-202ENST00000287844 FAM9AQ8IZU1 332 aaPredicted RBP13.56□□□□□ -0.24
ABCF2-202ENST00000287844 PRKCSHP14314 528 aaPredicted RBP13.54□□□□□ -0.24
ABCF2-202ENST00000287844 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
ABCF2-202ENST00000287844 ANP32EQ9BTT0 268 aa13.36□□□□□ -0.27
ABCF2-202ENST00000287844 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
ABCF2-202ENST00000287844 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
ABCF2-202ENST00000287844 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
ABCF2-202ENST00000287844 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
ABCF2-202ENST00000287844 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
ABCF2-202ENST00000287844 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
ABCF2-202ENST00000287844 APLP2Q06481 763 aa13.11□□□□□ -0.31
ABCF2-202ENST00000287844 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
ABCF2-202ENST00000287844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
ABCF2-202ENST00000287844 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
ABCF2-202ENST00000287844 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
ABCF2-202ENST00000287844 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
ABCF2-202ENST00000287844 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
ABCF2-202ENST00000287844 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
ABCF2-202ENST00000287844 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
ABCF2-202ENST00000287844 MIER1Q8N108 512 aa12.93□□□□□ -0.34
ABCF2-202ENST00000287844 ADRA2BP18089 450 aa12.89□□□□□ -0.35
ABCF2-202ENST00000287844 TIMELESSQ9UNS1 1208 aa12.88□□□□□ -0.35
ABCF2-202ENST00000287844 ABCC9O60706 1549 aa12.84□□□□□ -0.35
ABCF2-202ENST00000287844 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
ABCF2-202ENST00000287844 SCRIBQ14160 1630 aa12.83□□□□□ -0.36
ABCF2-202ENST00000287844 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
ABCF2-202ENST00000287844 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
ABCF2-202ENST00000287844 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
ABCF2-202ENST00000287844 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
ABCF2-202ENST00000287844 NACADO15069 1562 aa12.7□□□□□ -0.38
ABCF2-202ENST00000287844 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
ABCF2-202ENST00000287844 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
ABCF2-202ENST00000287844 ZBTB22O15209 634 aa12.65□□□□□ -0.39
ABCF2-202ENST00000287844 MSH5O43196 834 aa12.63□□□□□ -0.39
ABCF2-202ENST00000287844 BCANQ96GW7 911 aa12.63□□□□□ -0.39
ABCF2-202ENST00000287844 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
ABCF2-202ENST00000287844 DEKP35659 375 aaKnown RBP12.59□□□□□ -0.39
ABCF2-202ENST00000287844 UBE2Q2Q8WVN8 375 aa12.58□□□□□ -0.4
ABCF2-202ENST00000287844 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
ABCF2-202ENST00000287844 RB1CC1Q8TDY2 1594 aa12.57□□□□□ -0.4
ABCF2-202ENST00000287844 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
ABCF2-202ENST00000287844 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
ABCF2-202ENST00000287844 ARXQ96QS3 562 aa12.54□□□□□ -0.4
ABCF2-202ENST00000287844 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
ABCF2-202ENST00000287844 FKBP8Q14318 412 aa12.53□□□□□ -0.4
ABCF2-202ENST00000287844 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.4
ABCF2-202ENST00000287844 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
ABCF2-202ENST00000287844 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
ABCF2-202ENST00000287844 HAP1P54257 671 aaPredicted RBP12.46□□□□□ -0.41
ABCF2-202ENST00000287844 WIZO95785 1651 aa12.45□□□□□ -0.42
ABCF2-202ENST00000287844 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
ABCF2-202ENST00000287844 NEFLP07196 543 aa12.43□□□□□ -0.42
ABCF2-202ENST00000287844 ITGAEP38570 1179 aa12.43□□□□□ -0.42
ABCF2-202ENST00000287844 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
ABCF2-202ENST00000287844 UNC13AQ9UPW8 1703 aa12.41□□□□□ -0.42
ABCF2-202ENST00000287844 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
ABCF2-202ENST00000287844 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
ABCF2-202ENST00000287844 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
ABCF2-202ENST00000287844 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
ABCF2-202ENST00000287844 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.44
ABCF2-202ENST00000287844 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
ABCF2-202ENST00000287844 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
ABCF2-202ENST00000287844 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
ABCF2-202ENST00000287844 CNGB1Q14028 1251 aaPredicted RBP12.31□□□□□ -0.44
ABCF2-202ENST00000287844 NBR1Q14596 966 aa12.3□□□□□ -0.44
ABCF2-202ENST00000287844 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
ABCF2-202ENST00000287844 PKNOX2Q96KN3 472 aa12.29□□□□□ -0.44
ABCF2-202ENST00000287844 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
ABCF2-202ENST00000287844 HOMEZQ8IX15 550 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms