Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC11.22□□□□□ -0.613e-6■■□□□ 11.8
LARP4Q71RC2 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC9.21□□□□□ -0.943e-6■■□□□ 11.8
LARP4Q71RC2 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.073e-6■■□□□ 11.8
LARP4Q71RC2 RPS17-203ENST00000559273 580 ntTSL 214.28□□□□□ -0.127e-16■■□□□ 11.8
LARP4Q71RC2 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.027e-16■■□□□ 11.8
LARP4Q71RC2 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.493e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC11.53□□□□□ -0.563e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.623e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC10.92□□□□□ -0.663e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-206ENST00000553444 724 ntTSL 210.48□□□□□ -0.733e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.83e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC9.92□□□□□ -0.823e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-232ENST00000557442 1308 ntTSL 29.79□□□□□ -0.843e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC9.75□□□□□ -0.853e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC9.59□□□□□ -0.873e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC9.34□□□□□ -0.913e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-220ENST00000555585 682 ntTSL 29.31□□□□□ -0.923e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC9.3□□□□□ -0.923e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-209ENST00000554383 1039 ntTSL 59.11□□□□□ -0.953e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.74□□□□□ -1.013e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.033e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.113e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.92□□□□□ -1.143e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-212ENST00000554539 748 ntTSL 57.63□□□□□ -1.193e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.01□□□□□ -1.293e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-229ENST00000557157 698 ntTSL 54.3□□□□□ -1.723e-11■■□□□ 11.8
LARP4Q71RC2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.863e-11■■□□□ 11.8
LARP4Q71RC2 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.625e-9■■□□□ 11.8
LARP4Q71RC2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.384e-7■■□□□ 11.8
LARP4Q71RC2 C22orf39-204ENST00000509549 2979 ntTSL 211.75□□□□□ -0.537e-8■■□□□ 11.8
LARP4Q71RC2 HIRA-203ENST00000452818 453 ntTSL 510.05□□□□□ -0.87e-8■■□□□ 11.8
LARP4Q71RC2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.32■■□□□ 1.162e-6■■□□□ 11.8
LARP4Q71RC2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.842e-6■■□□□ 11.8
LARP4Q71RC2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.78■□□□□ 0.762e-6■■□□□ 11.8
LARP4Q71RC2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.722e-6■■□□□ 11.8
LARP4Q71RC2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.17■□□□□ 0.52e-6■■□□□ 11.8
LARP4Q71RC2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.57■□□□□ 0.42e-6■■□□□ 11.8
LARP4Q71RC2 SPNS1-208ENST00000566059 1615 ntTSL 516.7■□□□□ 0.262e-6■■□□□ 11.8
LARP4Q71RC2 SPNS1-211ENST00000568829 780 ntTSL 515.14■□□□□ 0.012e-6■■□□□ 11.8
LARP4Q71RC2 CTSA-206ENST00000480961 513 ntTSL 218.88■□□□□ 0.615e-11■■□□□ 11.8
LARP4Q71RC2 CTSA-209ENST00000493522 901 ntTSL 210.76□□□□□ -0.695e-11■■□□□ 11.8
LARP4Q71RC2 CTSA-205ENST00000419493 606 ntTSL 28.85□□□□□ -0.995e-11■■□□□ 11.8
LARP4Q71RC2 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC8.45□□□□□ -1.065e-11■■□□□ 11.8
LARP4Q71RC2 DDX24-203ENST00000553400 618 ntTSL 38.43□□□□□ -1.065e-11■■□□□ 11.8
LARP4Q71RC2 DDX24-204ENST00000553451 486 ntTSL 34.49□□□□□ -1.695e-11■■□□□ 11.8
LARP4Q71RC2 GPX3-205ENST00000520597 632 ntTSL 214.93□□□□□ -0.022e-10■■□□□ 11.8
LARP4Q71RC2 GPX3-204ENST00000520059 316 ntTSL 310.39□□□□□ -0.752e-10■■□□□ 11.8
LARP4Q71RC2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-9■■□□□ 11.8
LARP4Q71RC2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.262e-9■■□□□ 11.8
LARP4Q71RC2 RPLP0-226ENST00000552461 2591 ntTSL 216.26■□□□□ 0.192e-9■■□□□ 11.8
LARP4Q71RC2 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC11.78□□□□□ -0.522e-9■■□□□ 11.8
LARP4Q71RC2 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.642e-9■■□□□ 11.8
LARP4Q71RC2 RPLP0-214ENST00000549098 1106 ntTSL 210.34□□□□□ -0.752e-9■■□□□ 11.8
LARP4Q71RC2 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC9.53□□□□□ -0.882e-9■■□□□ 11.8
LARP4Q71RC2 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.33e-7■■□□□ 11.7
LARP4Q71RC2 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.78e-11■■□□□ 11.7
LARP4Q71RC2 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC9.68□□□□□ -0.868e-11■■□□□ 11.7
LARP4Q71RC2 TXNDC12-202ENST00000469458 446 ntTSL 38.79□□□□□ -13e-7■■□□□ 11.7
LARP4Q71RC2 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.038e-11■■□□□ 11.7
LARP4Q71RC2 SPP1-209ENST00000509659 1664 ntTSL 1 (best)7.38□□□□□ -1.238e-11■■□□□ 11.7
LARP4Q71RC2 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC11.35□□□□□ -0.594e-7■■□□□ 11.7
LARP4Q71RC2 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.214e-7■■□□□ 11.7
LARP4Q71RC2 BTF3-209ENST00000514505 740 ntTSL 56.64□□□□□ -1.354e-7■■□□□ 11.7
LARP4Q71RC2 BTF3-208ENST00000514360 1177 ntTSL 26.2□□□□□ -1.424e-7■■□□□ 11.7
LARP4Q71RC2 BTF3-205ENST00000509708 515 ntTSL 55.65□□□□□ -1.56e-7■■□□□ 11.7
LARP4Q71RC2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.243e-9■■□□□ 11.7
LARP4Q71RC2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.892e-9■■□□□ 11.7
LARP4Q71RC2 SSR2-207ENST00000473699 1027 ntTSL 314.26□□□□□ -0.132e-9■■□□□ 11.7
LARP4Q71RC2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.088e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.398e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-216ENST00000538451 1345 ntTSL 29.69□□□□□ -0.868e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC9.27□□□□□ -0.928e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.988e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.53□□□□□ -1.28e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.36□□□□□ -1.238e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.75□□□□□ -1.338e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-223ENST00000545215 1340 ntTSL 1 (best)6.29□□□□□ -1.48e-19■■□□□ 11.7
LARP4Q71RC2 LDHA-202ENST00000375710 2169 ntTSL 26.08□□□□□ -1.448e-19■■□□□ 11.7
LARP4Q71RC2 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC10.34□□□□□ -0.756e-36■■□□□ 11.7
LARP4Q71RC2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.568e-10■■□□□ 11.7
LARP4Q71RC2 KRT8-213ENST00000550170 2202 ntTSL 517.92■□□□□ 0.468e-10■■□□□ 11.7
LARP4Q71RC2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.388e-10■■□□□ 11.7
LARP4Q71RC2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.118e-10■■□□□ 11.7
LARP4Q71RC2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.27■□□□□ 0.038e-10■■□□□ 11.7
LARP4Q71RC2 KRT8-203ENST00000546583 2862 ntTSL 514.57□□□□□ -0.088e-10■■□□□ 11.7
LARP4Q71RC2 RRP36-201ENST00000244496 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.856e-7■■□□□ 11.7
LARP4Q71RC2 RRP36-202ENST00000607394 528 ntTSL 25.32□□□□□ -1.566e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.047e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.327e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.27e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.197e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.187e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.127e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.097e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.037e-7■■□□□ 11.7
LARP4Q71RC2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.267e-7■■□□□ 11.7
LARP4Q71RC2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.26■□□□□ 0.835e-8■■□□□ 11.7
LARP4Q71RC2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.72■□□□□ 0.275e-8■■□□□ 11.7
LARP4Q71RC2 YIF1B-206ENST00000586319 936 ntTSL 315.9■□□□□ 0.145e-8■■□□□ 11.7
LARP4Q71RC2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.115e-8■■□□□ 11.7
Retrieved 100 of 15,922 protein–RNA pairs in 159.3 ms