RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 NISCHQ9Y2I1 1504 aa47.65■■■■■ 5.22
SPNS1-207ENST00000565975 CCDC180Q9P1Z9 1646 aa40.94■■■■■ 4.14
SPNS1-207ENST00000565975 ZCCHC6Q5VYS8 1495 aaKnown RBP40.28■■■■■ 4.04
SPNS1-207ENST00000565975 SHROOM4Q9ULL8 1493 aa39.78■■■■□ 3.96
SPNS1-207ENST00000565975 DCAF1Q9Y4B6 1507 aa39.38■■■■□ 3.9
SPNS1-207ENST00000565975 ABCC9O60706 1549 aa39.13■■■■□ 3.85
SPNS1-207ENST00000565975 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.83
SPNS1-207ENST00000565975 SUPT5HO00267 1087 aaKnown RBP38.86■■■■□ 3.81
SPNS1-207ENST00000565975 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
SPNS1-207ENST00000565975 SCRIBQ14160 1630 aa37.89■■■■□ 3.66
SPNS1-207ENST00000565975 NACADO15069 1562 aa37.87■■■■□ 3.65
SPNS1-207ENST00000565975 CHIC1Q5VXU3 224 aa37.84■■■■□ 3.65
SPNS1-207ENST00000565975 RB1CC1Q8TDY2 1594 aa37.48■■■■□ 3.59
SPNS1-207ENST00000565975 RSF1Q96T23 1441 aaPredicted RBP37.46■■■■□ 3.59
SPNS1-207ENST00000565975 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
SPNS1-207ENST00000565975 MROH2BQ7Z745 1585 aa36.89■■■■□ 3.5
SPNS1-207ENST00000565975 BAZ1AQ9NRL2 1556 aaPredicted RBP36.69■■■■□ 3.46
SPNS1-207ENST00000565975 UNC13AQ9UPW8 1703 aa36.66■■■■□ 3.46
SPNS1-207ENST00000565975 WIZO95785 1651 aa36.64■■■■□ 3.46
SPNS1-207ENST00000565975 PABPN1Q86U42 306 aaKnown RBP eCLIP36.53■■■■□ 3.44
SPNS1-207ENST00000565975 LOC105371045A0A1W2PR82 267 aa36.44■■■■□ 3.42
SPNS1-207ENST00000565975 TRIM41Q8WV44 630 aa36.42■■■■□ 3.42
SPNS1-207ENST00000565975 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
SPNS1-207ENST00000565975 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
SPNS1-207ENST00000565975 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
SPNS1-207ENST00000565975 DNAJC5BQ9UF47 199 aa36.24■■■■□ 3.39
SPNS1-207ENST00000565975 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.39
SPNS1-207ENST00000565975 PCGF6Q9BYE7 350 aa36.04■■■■□ 3.36
SPNS1-207ENST00000565975 HRCP23327 699 aa36■■■■□ 3.35
SPNS1-207ENST00000565975 SMARCA2P51531 1590 aa35.99■■■■□ 3.35
SPNS1-207ENST00000565975 CCDC88BA6NC98 1476 aa35.95■■■■□ 3.35
SPNS1-207ENST00000565975 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
SPNS1-207ENST00000565975 FAM9AQ8IZU1 332 aaPredicted RBP35.82■■■■□ 3.33
SPNS1-207ENST00000565975 TRIM26Q12899 539 aaPredicted RBP35.73■■■■□ 3.31
SPNS1-207ENST00000565975 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
SPNS1-207ENST00000565975 ATAD2BQ9ULI0 1458 aa35.5■■■■□ 3.27
SPNS1-207ENST00000565975 CC2D2AQ9P2K1 1620 aa35.38■■■■□ 3.25
SPNS1-207ENST00000565975 BAZ1BQ9UIG0 1483 aaKnown RBP35.36■■■■□ 3.25
SPNS1-207ENST00000565975 EEA1Q15075 1411 aa35.33■■■■□ 3.25
SPNS1-207ENST00000565975 EHMT2Q96KQ7 1210 aa35.28■■■■□ 3.24
SPNS1-207ENST00000565975 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
SPNS1-207ENST00000565975 SOGA1O94964 1423 aa35.18■■■■□ 3.22
SPNS1-207ENST00000565975 TNIKQ9UKE5 1360 aa35.04■■■■□ 3.2
SPNS1-207ENST00000565975 CSRNP3Q8WYN3 585 aa35.04■■■■□ 3.2
SPNS1-207ENST00000565975 SYNJ1O43426 1573 aa35.02■■■■□ 3.2
SPNS1-207ENST00000565975 HMGXB3Q12766 1538 aa35.01■■■■□ 3.2
SPNS1-207ENST00000565975 RUSC2Q8N2Y8 1516 aa34.99■■■■□ 3.19
SPNS1-207ENST00000565975 NCAPD3P42695 1498 aa34.98■■■■□ 3.19
SPNS1-207ENST00000565975 PPARGC1BQ86YN6 1023 aaKnown RBP34.97■■■■□ 3.19
SPNS1-207ENST00000565975 CEP162Q5TB80 1403 aa34.94■■■■□ 3.18
SPNS1-207ENST00000565975 ZEB1P37275 1124 aaPredicted RBP34.93■■■■□ 3.18
SPNS1-207ENST00000565975 GOLGA3Q08378 1498 aa34.91■■■■□ 3.18
SPNS1-207ENST00000565975 KIF21BO75037 1637 aa34.8■■■■□ 3.16
SPNS1-207ENST00000565975 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
SPNS1-207ENST00000565975 TOP2BQ02880 1626 aa34.77■■■■□ 3.16
SPNS1-207ENST00000565975 BIVM-ERCC5R4GMW8 1640 aa34.71■■■■□ 3.15
SPNS1-207ENST00000565975 UBTFP17480 764 aaKnown RBP34.69■■■■□ 3.14
SPNS1-207ENST00000565975 CFTRP13569 1480 aa34.54■■■■□ 3.12
SPNS1-207ENST00000565975 RAPGEF2Q9Y4G8 1499 aa34.41■■■■□ 3.1
SPNS1-207ENST00000565975 CUX1P39880 1505 aa34.41■■■■□ 3.1
SPNS1-207ENST00000565975 CLIP1P30622 1438 aa34.4■■■■□ 3.1
SPNS1-207ENST00000565975 PRDM2Q13029 1718 aa34.37■■■■□ 3.09
SPNS1-207ENST00000565975 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
SPNS1-207ENST00000565975 PRXQ9BXM0 1461 aa34.3■■■■□ 3.08
SPNS1-207ENST00000565975 VPS8Q8N3P4 1428 aa34.27■■■■□ 3.08
SPNS1-207ENST00000565975 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
SPNS1-207ENST00000565975 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
SPNS1-207ENST00000565975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.12■■■■□ 3.05
SPNS1-207ENST00000565975 CCER1Q8TC90 406 aaPredicted RBP34.12■■■■□ 3.05
SPNS1-207ENST00000565975 TTBK1Q5TCY1 1321 aaPredicted RBP34.1■■■■□ 3.05
SPNS1-207ENST00000565975 APLP2Q06481 763 aa33.94■■■■□ 3.02
SPNS1-207ENST00000565975 ARAP1Q96P48 1450 aa33.92■■■■□ 3.02
SPNS1-207ENST00000565975 CUX2O14529 1486 aa33.86■■■■□ 3.01
SPNS1-207ENST00000565975 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
SPNS1-207ENST00000565975 FANCD2Q9BXW9 1451 aa33.81■■■■□ 3
SPNS1-207ENST00000565975 IGF1RP08069 1367 aa33.8■■■■□ 3
SPNS1-207ENST00000565975 NESP48681 1621 aa33.79■■■■□ 3
SPNS1-207ENST00000565975 RANGAP1P46060 587 aaPredicted RBP33.78■■■■□ 3
SPNS1-207ENST00000565975 ERCC6Q03468 1493 aa33.72■■■□□ 2.99
SPNS1-207ENST00000565975 DNMBPQ6XZF7 1577 aa33.71■■■□□ 2.99
SPNS1-207ENST00000565975 ARHGAP35Q9NRY4 1499 aa33.69■■■□□ 2.98
SPNS1-207ENST00000565975 CARMIL1Q5VZK9 1371 aa33.64■■■□□ 2.98
SPNS1-207ENST00000565975 LAMC3Q9Y6N6 1575 aa33.62■■■□□ 2.97
SPNS1-207ENST00000565975 HNRNPUL2Q1KMD3 747 aaKnown RBP33.59■■■□□ 2.97
SPNS1-207ENST00000565975 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
SPNS1-207ENST00000565975 ABCA10Q8WWZ4 1543 aa33.57■■■□□ 2.96
SPNS1-207ENST00000565975 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.95
SPNS1-207ENST00000565975 KANK4Q5T7N3 995 aaPredicted RBP33.47■■■□□ 2.95
SPNS1-207ENST00000565975 MAP3K1Q13233 1512 aa33.46■■■□□ 2.95
SPNS1-207ENST00000565975 RRBP1Q9P2E9 1410 aaKnown RBP33.46■■■□□ 2.95
SPNS1-207ENST00000565975 RAD54L2Q9Y4B4 1467 aa33.43■■■□□ 2.94
SPNS1-207ENST00000565975 PDS5BQ9NTI5 1447 aa33.41■■■□□ 2.94
SPNS1-207ENST00000565975 CUL7Q14999 1698 aa33.39■■■□□ 2.94
SPNS1-207ENST00000565975 KIF21AQ7Z4S6 1674 aa33.36■■■□□ 2.93
SPNS1-207ENST00000565975 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
SPNS1-207ENST00000565975 URB2Q14146 1524 aaKnown RBP33.33■■■□□ 2.93
SPNS1-207ENST00000565975 THOC2Q8NI27 1593 aaKnown RBP33.33■■■□□ 2.93
SPNS1-207ENST00000565975 TIAM1Q13009 1591 aa33.32■■■□□ 2.92
SPNS1-207ENST00000565975 FHAD1B1AJZ9 1412 aa33.3■■■□□ 2.92
SPNS1-207ENST00000565975 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms