RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
LDHA-204ENST00000396222 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
LDHA-204ENST00000396222 AEBP2Q6ZN18 517 aaPredicted RBP16.75■□□□□ 0.27
LDHA-204ENST00000396222 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
LDHA-204ENST00000396222 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
LDHA-204ENST00000396222 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
LDHA-204ENST00000396222 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
LDHA-204ENST00000396222 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
LDHA-204ENST00000396222 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
LDHA-204ENST00000396222 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.16
LDHA-204ENST00000396222 ABCC9O60706 1549 aa13.96□□□□□ -0.18
LDHA-204ENST00000396222 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.18
LDHA-204ENST00000396222 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
LDHA-204ENST00000396222 NACADO15069 1562 aa13.85□□□□□ -0.19
LDHA-204ENST00000396222 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
LDHA-204ENST00000396222 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
LDHA-204ENST00000396222 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
LDHA-204ENST00000396222 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
LDHA-204ENST00000396222 UNC13AQ9UPW8 1703 aa13.31□□□□□ -0.28
LDHA-204ENST00000396222 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
LDHA-204ENST00000396222 KCNA4P22459 653 aa13.22□□□□□ -0.29
LDHA-204ENST00000396222 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
LDHA-204ENST00000396222 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
LDHA-204ENST00000396222 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
LDHA-204ENST00000396222 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.313e-14■□□□□ 10.1
LDHA-204ENST00000396222 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
LDHA-204ENST00000396222 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
LDHA-204ENST00000396222 ADRA2BP18089 450 aa13.05□□□□□ -0.32
LDHA-204ENST00000396222 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
LDHA-204ENST00000396222 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
LDHA-204ENST00000396222 FOXD1Q16676 465 aa13.03□□□□□ -0.32
LDHA-204ENST00000396222 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.32
LDHA-204ENST00000396222 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
LDHA-204ENST00000396222 WIZO95785 1651 aa12.94□□□□□ -0.34
LDHA-204ENST00000396222 MSH5O43196 834 aa12.92□□□□□ -0.34
LDHA-204ENST00000396222 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
LDHA-204ENST00000396222 SMARCA2P51531 1590 aa12.9□□□□□ -0.34
LDHA-204ENST00000396222 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
LDHA-204ENST00000396222 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
LDHA-204ENST00000396222 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
LDHA-204ENST00000396222 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
LDHA-204ENST00000396222 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
LDHA-204ENST00000396222 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
LDHA-204ENST00000396222 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.37
LDHA-204ENST00000396222 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.38
LDHA-204ENST00000396222 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
LDHA-204ENST00000396222 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
LDHA-204ENST00000396222 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
LDHA-204ENST00000396222 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
LDHA-204ENST00000396222 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
LDHA-204ENST00000396222 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
LDHA-204ENST00000396222 CFTRP13569 1480 aa12.46□□□□□ -0.42
LDHA-204ENST00000396222 POTEHQ6S545 545 aa12.45□□□□□ -0.42
LDHA-204ENST00000396222 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
LDHA-204ENST00000396222 PIAS4Q8N2W9 510 aaPredicted RBP12.42□□□□□ -0.42
LDHA-204ENST00000396222 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
LDHA-204ENST00000396222 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
LDHA-204ENST00000396222 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
LDHA-204ENST00000396222 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
LDHA-204ENST00000396222 EEA1Q15075 1411 aa12.32□□□□□ -0.44
LDHA-204ENST00000396222 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
LDHA-204ENST00000396222 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
LDHA-204ENST00000396222 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
LDHA-204ENST00000396222 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
LDHA-204ENST00000396222 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
LDHA-204ENST00000396222 BIVM-ERCC5R4GMW8 1640 aa12.28□□□□□ -0.44
LDHA-204ENST00000396222 ZBTB22O15209 634 aa12.25□□□□□ -0.45
LDHA-204ENST00000396222 FAM9AQ8IZU1 332 aaPredicted RBP12.23□□□□□ -0.45
LDHA-204ENST00000396222 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
LDHA-204ENST00000396222 DNAJC5Q9H3Z4 198 aa12.21□□□□□ -0.45
LDHA-204ENST00000396222 CUX1P39880 1505 aa12.21□□□□□ -0.45
LDHA-204ENST00000396222 NESP48681 1621 aa12.21□□□□□ -0.46
LDHA-204ENST00000396222 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
LDHA-204ENST00000396222 SOGA1O94964 1423 aa12.17□□□□□ -0.46
LDHA-204ENST00000396222 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
LDHA-204ENST00000396222 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
LDHA-204ENST00000396222 TOPBP1Q92547 1522 aa12.13□□□□□ -0.47
LDHA-204ENST00000396222 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
LDHA-204ENST00000396222 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
LDHA-204ENST00000396222 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
LDHA-204ENST00000396222 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
LDHA-204ENST00000396222 RUSC2Q8N2Y8 1516 aa12.08□□□□□ -0.48
LDHA-204ENST00000396222 KIF21BO75037 1637 aa12.07□□□□□ -0.48
LDHA-204ENST00000396222 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
LDHA-204ENST00000396222 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
LDHA-204ENST00000396222 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
LDHA-204ENST00000396222 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
LDHA-204ENST00000396222 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
LDHA-204ENST00000396222 CUX2O14529 1486 aa12.05□□□□□ -0.48
LDHA-204ENST00000396222 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
LDHA-204ENST00000396222 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
LDHA-204ENST00000396222 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
LDHA-204ENST00000396222 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
LDHA-204ENST00000396222 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
LDHA-204ENST00000396222 WDR62O43379 1518 aa11.99□□□□□ -0.49
LDHA-204ENST00000396222 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
LDHA-204ENST00000396222 IGF1RP08069 1367 aa11.96□□□□□ -0.5
LDHA-204ENST00000396222 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
LDHA-204ENST00000396222 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
LDHA-204ENST00000396222 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms