RNA–Protein interactions for RNA: ENST00000422447.7

LDHA-205, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-205ENST00000422447 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
LDHA-205ENST00000422447 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
LDHA-205ENST00000422447 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
LDHA-205ENST00000422447 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
LDHA-205ENST00000422447 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
LDHA-205ENST00000422447 ABCC9O60706 1549 aa22.66■■□□□ 1.22
LDHA-205ENST00000422447 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
LDHA-205ENST00000422447 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
LDHA-205ENST00000422447 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
LDHA-205ENST00000422447 NACADO15069 1562 aa22.13■■□□□ 1.13
LDHA-205ENST00000422447 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
LDHA-205ENST00000422447 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
LDHA-205ENST00000422447 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
LDHA-205ENST00000422447 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
LDHA-205ENST00000422447 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
LDHA-205ENST00000422447 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.023e-14■□□□□ 10.1
LDHA-205ENST00000422447 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
LDHA-205ENST00000422447 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
LDHA-205ENST00000422447 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
LDHA-205ENST00000422447 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
LDHA-205ENST00000422447 WIZO95785 1651 aa21.08■□□□□ 0.97
LDHA-205ENST00000422447 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
LDHA-205ENST00000422447 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
LDHA-205ENST00000422447 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
LDHA-205ENST00000422447 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
LDHA-205ENST00000422447 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
LDHA-205ENST00000422447 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
LDHA-205ENST00000422447 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
LDHA-205ENST00000422447 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
LDHA-205ENST00000422447 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
LDHA-205ENST00000422447 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
LDHA-205ENST00000422447 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
LDHA-205ENST00000422447 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
LDHA-205ENST00000422447 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
LDHA-205ENST00000422447 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
LDHA-205ENST00000422447 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
LDHA-205ENST00000422447 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.86
LDHA-205ENST00000422447 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
LDHA-205ENST00000422447 SOGA1O94964 1423 aa20.23■□□□□ 0.83
LDHA-205ENST00000422447 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
LDHA-205ENST00000422447 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
LDHA-205ENST00000422447 HRCP23327 699 aa20.19■□□□□ 0.82
LDHA-205ENST00000422447 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.81
LDHA-205ENST00000422447 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
LDHA-205ENST00000422447 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
LDHA-205ENST00000422447 CSRNP3Q8WYN3 585 aa20.1■□□□□ 0.81
LDHA-205ENST00000422447 EEA1Q15075 1411 aa20.07■□□□□ 0.8
LDHA-205ENST00000422447 CFTRP13569 1480 aa20.04■□□□□ 0.8
LDHA-205ENST00000422447 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
LDHA-205ENST00000422447 TNIKQ9UKE5 1360 aa19.96■□□□□ 0.79
LDHA-205ENST00000422447 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
LDHA-205ENST00000422447 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
LDHA-205ENST00000422447 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
LDHA-205ENST00000422447 NESP48681 1621 aa19.93■□□□□ 0.78
LDHA-205ENST00000422447 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
LDHA-205ENST00000422447 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
LDHA-205ENST00000422447 GOLGA3Q08378 1498 aa19.89■□□□□ 0.78
LDHA-205ENST00000422447 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.77
LDHA-205ENST00000422447 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
LDHA-205ENST00000422447 CUX1P39880 1505 aa19.82■□□□□ 0.76
LDHA-205ENST00000422447 KIF21BO75037 1637 aa19.78■□□□□ 0.76
LDHA-205ENST00000422447 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
LDHA-205ENST00000422447 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
LDHA-205ENST00000422447 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
LDHA-205ENST00000422447 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
LDHA-205ENST00000422447 CLIP1P30622 1438 aa19.66■□□□□ 0.74
LDHA-205ENST00000422447 KIF21AQ7Z4S6 1674 aa19.63■□□□□ 0.73
LDHA-205ENST00000422447 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
LDHA-205ENST00000422447 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
LDHA-205ENST00000422447 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
LDHA-205ENST00000422447 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
LDHA-205ENST00000422447 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
LDHA-205ENST00000422447 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
LDHA-205ENST00000422447 TOPBP1Q92547 1522 aa19.57■□□□□ 0.72
LDHA-205ENST00000422447 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
LDHA-205ENST00000422447 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
LDHA-205ENST00000422447 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
LDHA-205ENST00000422447 VPS8Q8N3P4 1428 aa19.52■□□□□ 0.72
LDHA-205ENST00000422447 CUX2O14529 1486 aa19.52■□□□□ 0.71
LDHA-205ENST00000422447 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
LDHA-205ENST00000422447 RAD54L2Q9Y4B4 1467 aa19.49■□□□□ 0.71
LDHA-205ENST00000422447 IGF1RP08069 1367 aa19.48■□□□□ 0.71
LDHA-205ENST00000422447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
LDHA-205ENST00000422447 APLP2Q06481 763 aa19.4■□□□□ 0.7
LDHA-205ENST00000422447 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
LDHA-205ENST00000422447 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
LDHA-205ENST00000422447 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
LDHA-205ENST00000422447 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
LDHA-205ENST00000422447 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
LDHA-205ENST00000422447 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
LDHA-205ENST00000422447 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
LDHA-205ENST00000422447 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
LDHA-205ENST00000422447 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
LDHA-205ENST00000422447 WDR62O43379 1518 aa19.28■□□□□ 0.68
LDHA-205ENST00000422447 TARBP1Q13395 1621 aaKnown RBP19.27■□□□□ 0.68
LDHA-205ENST00000422447 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
LDHA-205ENST00000422447 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
LDHA-205ENST00000422447 KANK4Q5T7N3 995 aaPredicted RBP19.25■□□□□ 0.67
LDHA-205ENST00000422447 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
LDHA-205ENST00000422447 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms