RNA–Protein interactions for RNA: ENST00000430553.6

LDHA-206, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-206ENST00000430553 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
LDHA-206ENST00000430553 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
LDHA-206ENST00000430553 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
LDHA-206ENST00000430553 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
LDHA-206ENST00000430553 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
LDHA-206ENST00000430553 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
LDHA-206ENST00000430553 FOXD1Q16676 465 aa16.07■□□□□ 0.16
LDHA-206ENST00000430553 ADRA2BP18089 450 aa15.9■□□□□ 0.14
LDHA-206ENST00000430553 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
LDHA-206ENST00000430553 PIAS4Q8N2W9 510 aaPredicted RBP15.27■□□□□ 0.04
LDHA-206ENST00000430553 KCNA4P22459 653 aa15.24■□□□□ 0.03
LDHA-206ENST00000430553 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
LDHA-206ENST00000430553 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
LDHA-206ENST00000430553 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
LDHA-206ENST00000430553 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
LDHA-206ENST00000430553 SLC4A1APQ9BWU0 796 aaKnown RBP14.57□□□□□ -0.08
LDHA-206ENST00000430553 MSH5O43196 834 aa14.56□□□□□ -0.08
LDHA-206ENST00000430553 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
LDHA-206ENST00000430553 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
LDHA-206ENST00000430553 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
LDHA-206ENST00000430553 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
LDHA-206ENST00000430553 ABCC9O60706 1549 aa14.28□□□□□ -0.12
LDHA-206ENST00000430553 MAPK8IP2Q13387 824 aaPredicted RBP14.28□□□□□ -0.12
LDHA-206ENST00000430553 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
LDHA-206ENST00000430553 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
LDHA-206ENST00000430553 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
LDHA-206ENST00000430553 NACADO15069 1562 aa14.08□□□□□ -0.15
LDHA-206ENST00000430553 ZBTB22O15209 634 aa14.06□□□□□ -0.16
LDHA-206ENST00000430553 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
LDHA-206ENST00000430553 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
LDHA-206ENST00000430553 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
LDHA-206ENST00000430553 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
LDHA-206ENST00000430553 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
LDHA-206ENST00000430553 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
LDHA-206ENST00000430553 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
LDHA-206ENST00000430553 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
LDHA-206ENST00000430553 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
LDHA-206ENST00000430553 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
LDHA-206ENST00000430553 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
LDHA-206ENST00000430553 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.24
LDHA-206ENST00000430553 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
LDHA-206ENST00000430553 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
LDHA-206ENST00000430553 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
LDHA-206ENST00000430553 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.283e-14■□□□□ 10.1
LDHA-206ENST00000430553 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
LDHA-206ENST00000430553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
LDHA-206ENST00000430553 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
LDHA-206ENST00000430553 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
LDHA-206ENST00000430553 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
LDHA-206ENST00000430553 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
LDHA-206ENST00000430553 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
LDHA-206ENST00000430553 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
LDHA-206ENST00000430553 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
LDHA-206ENST00000430553 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
LDHA-206ENST00000430553 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
LDHA-206ENST00000430553 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
LDHA-206ENST00000430553 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
LDHA-206ENST00000430553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
LDHA-206ENST00000430553 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
LDHA-206ENST00000430553 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
LDHA-206ENST00000430553 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
LDHA-206ENST00000430553 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
LDHA-206ENST00000430553 NCAPD3P42695 1498 aa12.96□□□□□ -0.33
LDHA-206ENST00000430553 FKBP8Q14318 412 aa12.94□□□□□ -0.34
LDHA-206ENST00000430553 WIZO95785 1651 aa12.94□□□□□ -0.34
LDHA-206ENST00000430553 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
LDHA-206ENST00000430553 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
LDHA-206ENST00000430553 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
LDHA-206ENST00000430553 APLP2Q06481 763 aa12.7□□□□□ -0.38
LDHA-206ENST00000430553 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
LDHA-206ENST00000430553 SUPT5HO00267 1087 aaKnown RBP12.66□□□□□ -0.38
LDHA-206ENST00000430553 CCDC88BA6NC98 1476 aa12.64□□□□□ -0.39
LDHA-206ENST00000430553 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
LDHA-206ENST00000430553 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
LDHA-206ENST00000430553 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
LDHA-206ENST00000430553 CFTRP13569 1480 aa12.57□□□□□ -0.4
LDHA-206ENST00000430553 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
LDHA-206ENST00000430553 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
LDHA-206ENST00000430553 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
LDHA-206ENST00000430553 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
LDHA-206ENST00000430553 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
LDHA-206ENST00000430553 CAPN15O75808 1086 aa12.46□□□□□ -0.41
LDHA-206ENST00000430553 NESP48681 1621 aa12.46□□□□□ -0.42
LDHA-206ENST00000430553 POLA2Q14181 598 aa12.44□□□□□ -0.42
LDHA-206ENST00000430553 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
LDHA-206ENST00000430553 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
LDHA-206ENST00000430553 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
LDHA-206ENST00000430553 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
LDHA-206ENST00000430553 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
LDHA-206ENST00000430553 FBLN2P98095 1184 aa12.38□□□□□ -0.43
LDHA-206ENST00000430553 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
LDHA-206ENST00000430553 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
LDHA-206ENST00000430553 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
LDHA-206ENST00000430553 ABCB7O75027 752 aa12.31□□□□□ -0.44
LDHA-206ENST00000430553 ERCC6Q03468 1493 aa12.3□□□□□ -0.44
LDHA-206ENST00000430553 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
LDHA-206ENST00000430553 WDR62O43379 1518 aa12.3□□□□□ -0.44
LDHA-206ENST00000430553 DNMBPQ6XZF7 1577 aa12.29□□□□□ -0.44
LDHA-206ENST00000430553 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
LDHA-206ENST00000430553 PROM2Q8N271 834 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms