RNA–Protein interactions for RNA: ENST00000375710.7

LDHA-202, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 2,169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-202ENST00000375710 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
LDHA-202ENST00000375710 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
LDHA-202ENST00000375710 ABCC9O60706 1549 aa14.36□□□□□ -0.11
LDHA-202ENST00000375710 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
LDHA-202ENST00000375710 NACADO15069 1562 aa13.76□□□□□ -0.21
LDHA-202ENST00000375710 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
LDHA-202ENST00000375710 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
LDHA-202ENST00000375710 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
LDHA-202ENST00000375710 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
LDHA-202ENST00000375710 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
LDHA-202ENST00000375710 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.263e-14■□□□□ 10.1
LDHA-202ENST00000375710 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
LDHA-202ENST00000375710 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
LDHA-202ENST00000375710 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
LDHA-202ENST00000375710 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
LDHA-202ENST00000375710 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
LDHA-202ENST00000375710 CC2D2AQ9P2K1 1620 aa13□□□□□ -0.33
LDHA-202ENST00000375710 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
LDHA-202ENST00000375710 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
LDHA-202ENST00000375710 NCAPD3P42695 1498 aa12.71□□□□□ -0.37
LDHA-202ENST00000375710 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
LDHA-202ENST00000375710 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
LDHA-202ENST00000375710 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
LDHA-202ENST00000375710 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
LDHA-202ENST00000375710 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
LDHA-202ENST00000375710 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
LDHA-202ENST00000375710 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
LDHA-202ENST00000375710 WIZO95785 1651 aa12.47□□□□□ -0.41
LDHA-202ENST00000375710 RSF1Q96T23 1441 aaPredicted RBP12.44□□□□□ -0.42
LDHA-202ENST00000375710 NESP48681 1621 aa12.41□□□□□ -0.42
LDHA-202ENST00000375710 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
LDHA-202ENST00000375710 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
LDHA-202ENST00000375710 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
LDHA-202ENST00000375710 CADPSQ9ULU8 1353 aa12.32□□□□□ -0.44
LDHA-202ENST00000375710 CUX2O14529 1486 aa12.31□□□□□ -0.44
LDHA-202ENST00000375710 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
LDHA-202ENST00000375710 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
LDHA-202ENST00000375710 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
LDHA-202ENST00000375710 CFTRP13569 1480 aa12.24□□□□□ -0.45
LDHA-202ENST00000375710 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
LDHA-202ENST00000375710 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
LDHA-202ENST00000375710 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
LDHA-202ENST00000375710 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.47
LDHA-202ENST00000375710 WDR62O43379 1518 aa12.14□□□□□ -0.47
LDHA-202ENST00000375710 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
LDHA-202ENST00000375710 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
LDHA-202ENST00000375710 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
LDHA-202ENST00000375710 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
LDHA-202ENST00000375710 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
LDHA-202ENST00000375710 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
LDHA-202ENST00000375710 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
LDHA-202ENST00000375710 MYT1Q01538 1121 aa11.95□□□□□ -0.5
LDHA-202ENST00000375710 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
LDHA-202ENST00000375710 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
LDHA-202ENST00000375710 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
LDHA-202ENST00000375710 ZNF608Q9ULD9 1512 aaPredicted RBP11.87□□□□□ -0.51
LDHA-202ENST00000375710 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
LDHA-202ENST00000375710 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
LDHA-202ENST00000375710 CUX1P39880 1505 aa11.84□□□□□ -0.51
LDHA-202ENST00000375710 EIF4G3O43432 1585 aaKnown RBP11.8□□□□□ -0.52
LDHA-202ENST00000375710 FGD5Q6ZNL6 1462 aa11.8□□□□□ -0.52
LDHA-202ENST00000375710 SOGA1O94964 1423 aa11.8□□□□□ -0.52
LDHA-202ENST00000375710 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
LDHA-202ENST00000375710 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
LDHA-202ENST00000375710 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.522e-8■■■■□ 26.4
LDHA-202ENST00000375710 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
LDHA-202ENST00000375710 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
LDHA-202ENST00000375710 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
LDHA-202ENST00000375710 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
LDHA-202ENST00000375710 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
LDHA-202ENST00000375710 ABCA10Q8WWZ4 1543 aa11.7□□□□□ -0.54
LDHA-202ENST00000375710 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
LDHA-202ENST00000375710 CHD1O14646 1710 aa11.68□□□□□ -0.54
LDHA-202ENST00000375710 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
LDHA-202ENST00000375710 GAPVD1Q14C86 1478 aa11.66□□□□□ -0.54
LDHA-202ENST00000375710 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
LDHA-202ENST00000375710 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
LDHA-202ENST00000375710 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
LDHA-202ENST00000375710 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
LDHA-202ENST00000375710 FBLN2P98095 1184 aa11.63□□□□□ -0.55
LDHA-202ENST00000375710 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
LDHA-202ENST00000375710 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
LDHA-202ENST00000375710 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
LDHA-202ENST00000375710 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
LDHA-202ENST00000375710 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
LDHA-202ENST00000375710 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
LDHA-202ENST00000375710 CLASP1Q7Z460 1538 aa11.57□□□□□ -0.56
LDHA-202ENST00000375710 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
LDHA-202ENST00000375710 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
LDHA-202ENST00000375710 ADAMTS12P58397 1594 aa11.54□□□□□ -0.56
LDHA-202ENST00000375710 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
LDHA-202ENST00000375710 TTBK1Q5TCY1 1321 aaPredicted RBP11.52□□□□□ -0.56
LDHA-202ENST00000375710 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
LDHA-202ENST00000375710 NUP160Q12769 1436 aa11.5□□□□□ -0.57
LDHA-202ENST00000375710 ARAP1Q96P48 1450 aa11.49□□□□□ -0.57
LDHA-202ENST00000375710 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
LDHA-202ENST00000375710 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
LDHA-202ENST00000375710 IGF1RP08069 1367 aa11.47□□□□□ -0.57
LDHA-202ENST00000375710 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
LDHA-202ENST00000375710 SHROOM2Q13796 1616 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms