Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF170Q96K19 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RNF170Q96K19 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF170Q96K19 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF170Q96K19 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF170Q96K19 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF170Q96K19 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF170Q96K19 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF170Q96K19 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF170Q96K19 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF170Q96K19 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
RNF170Q96K19 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
RNF170Q96K19 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF170Q96K19 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF170Q96K19 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF170Q96K19 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF170Q96K19 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF170Q96K19 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF170Q96K19 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF170Q96K19 AC091060.1-201ENST00000623524 1766 ntBASIC21.91■■□□□ 1.1
RNF170Q96K19 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF170Q96K19 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF170Q96K19 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF170Q96K19 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RNF170Q96K19 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF170Q96K19 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF170Q96K19 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RNF170Q96K19 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF170Q96K19 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF170Q96K19 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF170Q96K19 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RNF170Q96K19 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF170Q96K19 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF170Q96K19 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF170Q96K19 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
RNF170Q96K19 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF170Q96K19 AC100797.4-201ENST00000631653 1827 ntBASIC21.88■■□□□ 1.09
RNF170Q96K19 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF170Q96K19 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF170Q96K19 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF170Q96K19 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF170Q96K19 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF170Q96K19 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF170Q96K19 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF170Q96K19 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF170Q96K19 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF170Q96K19 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF170Q96K19 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF170Q96K19 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF170Q96K19 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF170Q96K19 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RNF170Q96K19 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF170Q96K19 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF170Q96K19 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF170Q96K19 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RNF170Q96K19 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.86■■□□□ 1.09
RNF170Q96K19 AC135983.2-203ENST00000454486 1613 ntBASIC21.86■■□□□ 1.09
RNF170Q96K19 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF170Q96K19 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF170Q96K19 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RNF170Q96K19 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RNF170Q96K19 LINC00273-201ENST00000539813 1452 ntBASIC21.84■■□□□ 1.09
RNF170Q96K19 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF170Q96K19 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RNF170Q96K19 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF170Q96K19 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF170Q96K19 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF170Q96K19 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RNF170Q96K19 RPS2P35-201ENST00000443417 897 ntBASIC21.83■■□□□ 1.09
RNF170Q96K19 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF170Q96K19 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF170Q96K19 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF170Q96K19 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF170Q96K19 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RNF170Q96K19 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF170Q96K19 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF170Q96K19 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF170Q96K19 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF170Q96K19 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF170Q96K19 WHAMMP2-203ENST00000563942 1603 ntBASIC21.81■■□□□ 1.08
RNF170Q96K19 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF170Q96K19 LINC01003-201ENST00000564834 1764 ntBASIC21.81■■□□□ 1.08
RNF170Q96K19 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF170Q96K19 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF170Q96K19 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF170Q96K19 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF170Q96K19 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF170Q96K19 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF170Q96K19 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.8■■□□□ 1.08
RNF170Q96K19 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF170Q96K19 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.79■■□□□ 1.08
RNF170Q96K19 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF170Q96K19 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF170Q96K19 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms