RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 NISCHQ9Y2I1 1504 aa54.08■■■■■ 6.25
SHISA5-201ENST00000296444 CCDC180Q9P1Z9 1646 aa46.67■■■■■ 5.06
SHISA5-201ENST00000296444 ZCCHC6Q5VYS8 1495 aaKnown RBP45.41■■■■■ 4.86
SHISA5-201ENST00000296444 DCAF8L2P0C7V8 631 aa45.23■■■■■ 4.83
SHISA5-201ENST00000296444 SHROOM4Q9ULL8 1493 aa44.9■■■■■ 4.78
SHISA5-201ENST00000296444 ABCC9O60706 1549 aa44.69■■■■■ 4.74
SHISA5-201ENST00000296444 DCAF1Q9Y4B6 1507 aa44.35■■■■■ 4.69
SHISA5-201ENST00000296444 MYO15BQ96JP2 1530 aa43.68■■■■■ 4.58
SHISA5-201ENST00000296444 NACADO15069 1562 aa43.54■■■■■ 4.56
SHISA5-201ENST00000296444 SCRIBQ14160 1630 aa43.5■■■■■ 4.55
SHISA5-201ENST00000296444 SUPT5HO00267 1087 aaKnown RBP43.23■■■■■ 4.51
SHISA5-201ENST00000296444 RB1CC1Q8TDY2 1594 aa43.17■■■■■ 4.5
SHISA5-201ENST00000296444 UNC13AQ9UPW8 1703 aa42.56■■■■■ 4.4
SHISA5-201ENST00000296444 PABPN1Q86U42 306 aaKnown RBP eCLIP42.43■■■■■ 4.38
SHISA5-201ENST00000296444 CECR2Q9BXF3 1484 aa42.36■■■■■ 4.37
SHISA5-201ENST00000296444 RSF1Q96T23 1441 aaPredicted RBP42.19■■■■■ 4.34
SHISA5-201ENST00000296444 BICRAQ9NZM4 1560 aa42.18■■■■■ 4.34
SHISA5-201ENST00000296444 MROH2BQ7Z745 1585 aa42■■■■■ 4.31
SHISA5-201ENST00000296444 WIZO95785 1651 aa41.66■■■■■ 4.26
SHISA5-201ENST00000296444 BAZ1AQ9NRL2 1556 aaPredicted RBP41.59■■■■■ 4.25
SHISA5-201ENST00000296444 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
SHISA5-201ENST00000296444 CHIC1Q5VXU3 224 aa41.3■■■■■ 4.2
SHISA5-201ENST00000296444 TOP2AP11388 1531 aaKnown RBP40.93■■■■■ 4.14
SHISA5-201ENST00000296444 ATAD2BQ9ULI0 1458 aa40.87■■■■■ 4.13
SHISA5-201ENST00000296444 EIF4G1Q04637 1599 aaKnown RBP40.81■■■■■ 4.12
SHISA5-201ENST00000296444 PEG3Q9GZU2 1588 aa40.8■■■■■ 4.12
SHISA5-201ENST00000296444 CCDC88BA6NC98 1476 aa40.79■■■■■ 4.12
SHISA5-201ENST00000296444 SMARCA2P51531 1590 aa40.7■■■■■ 4.11
SHISA5-201ENST00000296444 BAZ1BQ9UIG0 1483 aaKnown RBP40.59■■■■■ 4.09
SHISA5-201ENST00000296444 NCAPD3P42695 1498 aa40.35■■■■■ 4.05
SHISA5-201ENST00000296444 TRIM41Q8WV44 630 aa40.35■■■■■ 4.05
SHISA5-201ENST00000296444 CC2D2AQ9P2K1 1620 aa40.23■■■■■ 4.03
SHISA5-201ENST00000296444 HMGXB3Q12766 1538 aa40.16■■■■■ 4.02
SHISA5-201ENST00000296444 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
SHISA5-201ENST00000296444 LOC105371045A0A1W2PR82 267 aa40.06■■■■■ 4
SHISA5-201ENST00000296444 FAM9AQ8IZU1 332 aaPredicted RBP40.01■■■■■ 4
SHISA5-201ENST00000296444 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
SHISA5-201ENST00000296444 EHMT2Q96KQ7 1210 aa39.73■■■■□ 3.95
SHISA5-201ENST00000296444 WRNQ14191 1432 aaPredicted RBP eCLIP39.61■■■■□ 3.93
SHISA5-201ENST00000296444 CFTRP13569 1480 aa39.56■■■■□ 3.92
SHISA5-201ENST00000296444 SYNJ1O43426 1573 aa39.53■■■■□ 3.92
SHISA5-201ENST00000296444 SOGA1O94964 1423 aa39.47■■■■□ 3.91
SHISA5-201ENST00000296444 CADPSQ9ULU8 1353 aa39.45■■■■□ 3.91
SHISA5-201ENST00000296444 RUSC2Q8N2Y8 1516 aa39.41■■■■□ 3.9
SHISA5-201ENST00000296444 NESP48681 1621 aa39.37■■■■□ 3.89
SHISA5-201ENST00000296444 CUX1P39880 1505 aa39.19■■■■□ 3.86
SHISA5-201ENST00000296444 TOP2BQ02880 1626 aa39.14■■■■□ 3.86
SHISA5-201ENST00000296444 PRDM2Q13029 1718 aa39.05■■■■□ 3.84
SHISA5-201ENST00000296444 FANCD2Q9BXW9 1451 aa39.03■■■■□ 3.84
SHISA5-201ENST00000296444 CSRNP3Q8WYN3 585 aa39.02■■■■□ 3.84
SHISA5-201ENST00000296444 BIVM-ERCC5R4GMW8 1640 aa39.01■■■■□ 3.84
SHISA5-201ENST00000296444 LAMC3Q9Y6N6 1575 aa38.82■■■■□ 3.81
SHISA5-201ENST00000296444 EEA1Q15075 1411 aa38.79■■■■□ 3.8
SHISA5-201ENST00000296444 FGD5Q6ZNL6 1462 aa38.71■■■■□ 3.79
SHISA5-201ENST00000296444 CEP164Q9UPV0 1460 aa38.66■■■■□ 3.78
SHISA5-201ENST00000296444 UBTFP17480 764 aaKnown RBP38.66■■■■□ 3.78
SHISA5-201ENST00000296444 URB2Q14146 1524 aaKnown RBP38.62■■■■□ 3.77
SHISA5-201ENST00000296444 TOPBP1Q92547 1522 aa38.62■■■■□ 3.77
SHISA5-201ENST00000296444 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
SHISA5-201ENST00000296444 KIF21AQ7Z4S6 1674 aa38.61■■■■□ 3.77
SHISA5-201ENST00000296444 RAD54L2Q9Y4B4 1467 aa38.58■■■■□ 3.77
SHISA5-201ENST00000296444 RAPGEF2Q9Y4G8 1499 aa38.55■■■■□ 3.76
SHISA5-201ENST00000296444 DNMBPQ6XZF7 1577 aa38.54■■■■□ 3.76
SHISA5-201ENST00000296444 CUX2O14529 1486 aa38.52■■■■□ 3.76
SHISA5-201ENST00000296444 POLA1P09884 1462 aaPredicted RBP38.5■■■■□ 3.75
SHISA5-201ENST00000296444 KIF27Q86VH2 1401 aa38.49■■■■□ 3.75
SHISA5-201ENST00000296444 GOLGA3Q08378 1498 aa38.49■■■■□ 3.75
SHISA5-201ENST00000296444 TNIKQ9UKE5 1360 aa38.46■■■■□ 3.75
SHISA5-201ENST00000296444 CEP162Q5TB80 1403 aa38.4■■■■□ 3.74
SHISA5-201ENST00000296444 KIF21BO75037 1637 aa38.4■■■■□ 3.74
SHISA5-201ENST00000296444 RANGAP1P46060 587 aaPredicted RBP38.39■■■■□ 3.74
SHISA5-201ENST00000296444 IGF1RP08069 1367 aa38.36■■■■□ 3.73
SHISA5-201ENST00000296444 PRXQ9BXM0 1461 aa38.35■■■■□ 3.73
SHISA5-201ENST00000296444 PPARGC1BQ86YN6 1023 aaKnown RBP38.34■■■■□ 3.73
SHISA5-201ENST00000296444 PCGF6Q9BYE7 350 aa38.27■■■■□ 3.72
SHISA5-201ENST00000296444 TDRD9Q8NDG6 1382 aaKnown RBP38.22■■■■□ 3.71
SHISA5-201ENST00000296444 ABCA10Q8WWZ4 1543 aa38.21■■■■□ 3.71
SHISA5-201ENST00000296444 MRC2Q9UBG0 1479 aa38.14■■■■□ 3.7
SHISA5-201ENST00000296444 CARMIL1Q5VZK9 1371 aa38.1■■■■□ 3.69
SHISA5-201ENST00000296444 ERCC6Q03468 1493 aa38.07■■■■□ 3.69
SHISA5-201ENST00000296444 ERICH3Q5RHP9 1530 aa38.07■■■■□ 3.68
SHISA5-201ENST00000296444 CLIP1P30622 1438 aa38.03■■■■□ 3.68
SHISA5-201ENST00000296444 WDR97A6NE52 1622 aa38.01■■■■□ 3.67
SHISA5-201ENST00000296444 TARBP1Q13395 1621 aaKnown RBP37.99■■■■□ 3.67
SHISA5-201ENST00000296444 TTBK1Q5TCY1 1321 aaPredicted RBP37.97■■■■□ 3.67
SHISA5-201ENST00000296444 AQRO60306 1485 aaKnown RBP eCLIP37.93■■■■□ 3.66
SHISA5-201ENST00000296444 GAPVD1Q14C86 1478 aa37.9■■■■□ 3.66
SHISA5-201ENST00000296444 WDR62O43379 1518 aa37.9■■■■□ 3.66
SHISA5-201ENST00000296444 ABCA5Q8WWZ7 1642 aa37.87■■■■□ 3.65
SHISA5-201ENST00000296444 ZNF608Q9ULD9 1512 aaPredicted RBP37.85■■■■□ 3.65
SHISA5-201ENST00000296444 TRIM26Q12899 539 aaPredicted RBP37.85■■■■□ 3.65
SHISA5-201ENST00000296444 THOC2Q8NI27 1593 aaKnown RBP37.81■■■■□ 3.64
SHISA5-201ENST00000296444 ARAP1Q96P48 1450 aa37.69■■■■□ 3.62
SHISA5-201ENST00000296444 IFT140Q96RY7 1462 aa37.65■■■■□ 3.62
SHISA5-201ENST00000296444 ARHGAP35Q9NRY4 1499 aa37.64■■■■□ 3.62
SHISA5-201ENST00000296444 HRCP23327 699 aa37.64■■■■□ 3.62
SHISA5-201ENST00000296444 VPS8Q8N3P4 1428 aa37.63■■■■□ 3.62
SHISA5-201ENST00000296444 P3H3Q8IVL6 736 aa37.62■■■■□ 3.61
SHISA5-201ENST00000296444 CUL7Q14999 1698 aa37.62■■■■□ 3.61
SHISA5-201ENST00000296444 PBRM1Q86U86 1689 aa37.54■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms