RNA–Protein interactions for RNA: ENST00000308647.7

ATAD3B-201, Transcript of ATPase family, AAA domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATAD3B, Length 2,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-201ENST00000308647 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
ATAD3B-201ENST00000308647 SHROOM4Q9ULL8 1493 aa40.41■■■■■ 4.06
ATAD3B-201ENST00000308647 ZCCHC6Q5VYS8 1495 aaKnown RBP39.88■■■■□ 3.97
ATAD3B-201ENST00000308647 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
ATAD3B-201ENST00000308647 SUPT5HO00267 1087 aaKnown RBP39.74■■■■□ 3.95
ATAD3B-201ENST00000308647 DCAF8L2P0C7V8 631 aa38.89■■■■□ 3.82
ATAD3B-201ENST00000308647 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
ATAD3B-201ENST00000308647 CHIC1Q5VXU3 224 aa38.81■■■■□ 3.8
ATAD3B-201ENST00000308647 DCAF1Q9Y4B6 1507 aa38.55■■■■□ 3.76
ATAD3B-201ENST00000308647 HRCP23327 699 aa38.2■■■■□ 3.71
ATAD3B-201ENST00000308647 PCGF6Q9BYE7 350 aa37.96■■■■□ 3.67
ATAD3B-201ENST00000308647 ABCC9O60706 1549 aa37.71■■■■□ 3.63
ATAD3B-201ENST00000308647 LOC105371045A0A1W2PR82 267 aa37.69■■■■□ 3.62
ATAD3B-201ENST00000308647 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
ATAD3B-201ENST00000308647 PPARGC1BQ86YN6 1023 aaKnown RBP37.4■■■■□ 3.58
ATAD3B-201ENST00000308647 RSF1Q96T23 1441 aaPredicted RBP37.37■■■■□ 3.57
ATAD3B-201ENST00000308647 TRIM26Q12899 539 aaPredicted RBP37.11■■■■□ 3.53
ATAD3B-201ENST00000308647 RB1CC1Q8TDY2 1594 aa37.08■■■■□ 3.53
ATAD3B-201ENST00000308647 TRIM41Q8WV44 630 aa36.95■■■■□ 3.51
ATAD3B-201ENST00000308647 FAM9AQ8IZU1 332 aaPredicted RBP36.72■■■■□ 3.47
ATAD3B-201ENST00000308647 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
ATAD3B-201ENST00000308647 NACADO15069 1562 aa36.7■■■■□ 3.47
ATAD3B-201ENST00000308647 MROH2BQ7Z745 1585 aa36.62■■■■□ 3.45
ATAD3B-201ENST00000308647 WIZO95785 1651 aa36.45■■■■□ 3.43
ATAD3B-201ENST00000308647 EHMT2Q96KQ7 1210 aa36.43■■■■□ 3.42
ATAD3B-201ENST00000308647 ZEB1P37275 1124 aaPredicted RBP36.4■■■■□ 3.42
ATAD3B-201ENST00000308647 BAZ1AQ9NRL2 1556 aaPredicted RBP36.24■■■■□ 3.39
ATAD3B-201ENST00000308647 EIF4G1Q04637 1599 aaKnown RBP36.14■■■■□ 3.38
ATAD3B-201ENST00000308647 TOP2AP11388 1531 aaKnown RBP35.85■■■■□ 3.33
ATAD3B-201ENST00000308647 ABCC8Q09428 1581 aa35.78■■■■□ 3.32
ATAD3B-201ENST00000308647 SMARCA4P51532 1647 aa35.77■■■■□ 3.32
ATAD3B-201ENST00000308647 CCDC88BA6NC98 1476 aa35.71■■■■□ 3.31
ATAD3B-201ENST00000308647 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
ATAD3B-201ENST00000308647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.62■■■■□ 3.29
ATAD3B-201ENST00000308647 UNC13AQ9UPW8 1703 aa35.59■■■■□ 3.29
ATAD3B-201ENST00000308647 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.287e-7■■□□□ 13.9
ATAD3B-201ENST00000308647 CCER1Q8TC90 406 aaPredicted RBP35.51■■■■□ 3.27
ATAD3B-201ENST00000308647 SOGA1O94964 1423 aa35.49■■■■□ 3.27
ATAD3B-201ENST00000308647 CEP162Q5TB80 1403 aa35.48■■■■□ 3.27
ATAD3B-201ENST00000308647 SCAF1Q9H7N4 1312 aaKnown RBP35.44■■■■□ 3.26
ATAD3B-201ENST00000308647 TNIKQ9UKE5 1360 aa35.36■■■■□ 3.25
ATAD3B-201ENST00000308647 TTBK1Q5TCY1 1321 aaPredicted RBP35.36■■■■□ 3.25
ATAD3B-201ENST00000308647 RUSC2Q8N2Y8 1516 aa35.32■■■■□ 3.24
ATAD3B-201ENST00000308647 EEA1Q15075 1411 aa35.29■■■■□ 3.24
ATAD3B-201ENST00000308647 CSRNP3Q8WYN3 585 aa35.25■■■■□ 3.23
ATAD3B-201ENST00000308647 UBTFP17480 764 aaKnown RBP35.15■■■■□ 3.22
ATAD3B-201ENST00000308647 BICRAQ9NZM4 1560 aa35.12■■■■□ 3.21
ATAD3B-201ENST00000308647 GOLGA3Q08378 1498 aa35.12■■■■□ 3.21
ATAD3B-201ENST00000308647 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.219e-7■■■■■ 28.2
ATAD3B-201ENST00000308647 PEG3Q9GZU2 1588 aa35.03■■■■□ 3.2
ATAD3B-201ENST00000308647 DIEXFQ68CQ4 756 aaKnown RBP35■■■■□ 3.19
ATAD3B-201ENST00000308647 PELP1Q8IZL8 1130 aaKnown RBP34.96■■■■□ 3.19
ATAD3B-201ENST00000308647 ACIN1Q9UKV3 1341 aaKnown RBP34.95■■■■□ 3.19
ATAD3B-201ENST00000308647 SYNJ1O43426 1573 aa34.95■■■■□ 3.19
ATAD3B-201ENST00000308647 NEUROD1Q13562 356 aa34.91■■■■□ 3.18
ATAD3B-201ENST00000308647 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
ATAD3B-201ENST00000308647 KIF21BO75037 1637 aa34.85■■■■□ 3.17
ATAD3B-201ENST00000308647 ATAD2BQ9ULI0 1458 aa34.75■■■■□ 3.15
ATAD3B-201ENST00000308647 CLIP1P30622 1438 aa34.73■■■■□ 3.15
ATAD3B-201ENST00000308647 BAZ1BQ9UIG0 1483 aaKnown RBP34.68■■■■□ 3.14
ATAD3B-201ENST00000308647 ZNF316A6NFI3 1004 aaPredicted RBP34.65■■■■□ 3.14
ATAD3B-201ENST00000308647 CENPBP07199 599 aaPredicted RBP34.65■■■■□ 3.14
ATAD3B-201ENST00000308647 VPS8Q8N3P4 1428 aa34.63■■■■□ 3.13
ATAD3B-201ENST00000308647 RAPGEF2Q9Y4G8 1499 aa34.61■■■■□ 3.13
ATAD3B-201ENST00000308647 HNRNPUL2Q1KMD3 747 aaKnown RBP34.61■■■■□ 3.13
ATAD3B-201ENST00000308647 GTF3C3Q9Y5Q9 886 aa34.56■■■■□ 3.12
ATAD3B-201ENST00000308647 TOP2BQ02880 1626 aa34.45■■■■□ 3.1
ATAD3B-201ENST00000308647 RANGAP1P46060 587 aaPredicted RBP34.41■■■■□ 3.1
ATAD3B-201ENST00000308647 APLP2Q06481 763 aa34.4■■■■□ 3.1
ATAD3B-201ENST00000308647 BIVM-ERCC5R4GMW8 1640 aa34.31■■■■□ 3.08
ATAD3B-201ENST00000308647 MIER1Q8N108 512 aa34.23■■■■□ 3.07
ATAD3B-201ENST00000308647 YTHDC1Q96MU7 727 aaKnown RBP34.23■■■■□ 3.07
ATAD3B-201ENST00000308647 ERICH3Q5RHP9 1530 aa34.22■■■■□ 3.07
ATAD3B-201ENST00000308647 PRXQ9BXM0 1461 aa34.21■■■■□ 3.07
ATAD3B-201ENST00000308647 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
ATAD3B-201ENST00000308647 CUX1P39880 1505 aa34.06■■■■□ 3.04
ATAD3B-201ENST00000308647 HMGXB3Q12766 1538 aa34.02■■■■□ 3.04
ATAD3B-201ENST00000308647 KANK4Q5T7N3 995 aaPredicted RBP34.02■■■■□ 3.04
ATAD3B-201ENST00000308647 DHX57Q6P158 1386 aaKnown RBP34.01■■■■□ 3.04
ATAD3B-201ENST00000308647 NCAPD3P42695 1498 aa33.98■■■■□ 3.03
ATAD3B-201ENST00000308647 CLSPNQ9HAW4 1339 aa33.95■■■■□ 3.03
ATAD3B-201ENST00000308647 KIF27Q86VH2 1401 aa33.94■■■■□ 3.02
ATAD3B-201ENST00000308647 RRBP1Q9P2E9 1410 aaKnown RBP33.88■■■■□ 3.01
ATAD3B-201ENST00000308647 CFTRP13569 1480 aa33.83■■■■□ 3.01
ATAD3B-201ENST00000308647 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
ATAD3B-201ENST00000308647 CUX2O14529 1486 aa33.73■■■□□ 2.99
ATAD3B-201ENST00000308647 CCNB3Q8WWL7 1395 aa33.71■■■□□ 2.99
ATAD3B-201ENST00000308647 ITGAEP38570 1179 aa33.57■■■□□ 2.96
ATAD3B-201ENST00000308647 PRDM2Q13029 1718 aa33.56■■■□□ 2.96
ATAD3B-201ENST00000308647 IGF1RP08069 1367 aa33.56■■■□□ 2.96
ATAD3B-201ENST00000308647 TIAM1Q13009 1591 aa33.5■■■□□ 2.95
ATAD3B-201ENST00000308647 RAB3GAP2Q9H2M9 1393 aa33.46■■■□□ 2.95
ATAD3B-201ENST00000308647 MAP3K1Q13233 1512 aa33.43■■■□□ 2.94
ATAD3B-201ENST00000308647 MAPKBP1O60336 1514 aa33.42■■■□□ 2.94
ATAD3B-201ENST00000308647 CARMIL1Q5VZK9 1371 aa33.41■■■□□ 2.94
ATAD3B-201ENST00000308647 FGD5Q6ZNL6 1462 aa33.4■■■□□ 2.94
ATAD3B-201ENST00000308647 CADPSQ9ULU8 1353 aa33.37■■■□□ 2.93
ATAD3B-201ENST00000308647 LRRC9Q6ZRR7 1453 aa33.36■■■□□ 2.93
ATAD3B-201ENST00000308647 PHLDB1Q86UU1 1377 aa33.32■■■□□ 2.92
ATAD3B-201ENST00000308647 SETD5Q9C0A6 1442 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms