Protein–RNA interactions for Protein: A6NJ88

SAGE2P, Putative SAGE1-like protein, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAGE2PA6NJ88 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 TMPOP1-202ENST00000424642 1267 ntBASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAGE2PA6NJ88 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.65■□□□□ 0.42
SAGE2PA6NJ88 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SAGE2PA6NJ88 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.64■□□□□ 0.42
SAGE2PA6NJ88 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SAGE2PA6NJ88 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SAGE2PA6NJ88 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 AL512604.3-201ENST00000569583 964 ntBASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 CROCCP3-202ENST00000420820 1947 ntBASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.64■□□□□ 0.41
SAGE2PA6NJ88 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 NOC2LP2-201ENST00000407594 1944 ntBASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAGE2PA6NJ88 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms