RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
CROCCP3-202ENST00000420820 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
CROCCP3-202ENST00000420820 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
CROCCP3-202ENST00000420820 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
CROCCP3-202ENST00000420820 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
CROCCP3-202ENST00000420820 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
CROCCP3-202ENST00000420820 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
CROCCP3-202ENST00000420820 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
CROCCP3-202ENST00000420820 ABCC9O60706 1549 aa32.86■■■□□ 2.85
CROCCP3-202ENST00000420820 NACADO15069 1562 aa32.65■■■□□ 2.82
CROCCP3-202ENST00000420820 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
CROCCP3-202ENST00000420820 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
CROCCP3-202ENST00000420820 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
CROCCP3-202ENST00000420820 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
CROCCP3-202ENST00000420820 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
CROCCP3-202ENST00000420820 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
CROCCP3-202ENST00000420820 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
CROCCP3-202ENST00000420820 BAZ1AQ9NRL2 1556 aaPredicted RBP31.54■■■□□ 2.64
CROCCP3-202ENST00000420820 WIZO95785 1651 aa31.54■■■□□ 2.64
CROCCP3-202ENST00000420820 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
CROCCP3-202ENST00000420820 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
CROCCP3-202ENST00000420820 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
CROCCP3-202ENST00000420820 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
CROCCP3-202ENST00000420820 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
CROCCP3-202ENST00000420820 LOC105371045A0A1W2PR82 267 aa31.09■■■□□ 2.57
CROCCP3-202ENST00000420820 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
CROCCP3-202ENST00000420820 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
CROCCP3-202ENST00000420820 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
CROCCP3-202ENST00000420820 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
CROCCP3-202ENST00000420820 ATAD2BQ9ULI0 1458 aa30.59■■■□□ 2.49
CROCCP3-202ENST00000420820 FAM9AQ8IZU1 332 aaPredicted RBP30.58■■■□□ 2.49
CROCCP3-202ENST00000420820 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
CROCCP3-202ENST00000420820 PCGF6Q9BYE7 350 aa30.54■■■□□ 2.48
CROCCP3-202ENST00000420820 BAZ1BQ9UIG0 1483 aaKnown RBP30.42■■■□□ 2.46
CROCCP3-202ENST00000420820 HRCP23327 699 aa30.39■■■□□ 2.46
CROCCP3-202ENST00000420820 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
CROCCP3-202ENST00000420820 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
CROCCP3-202ENST00000420820 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
CROCCP3-202ENST00000420820 EEA1Q15075 1411 aa30.18■■■□□ 2.42
CROCCP3-202ENST00000420820 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
CROCCP3-202ENST00000420820 SOGA1O94964 1423 aa30.16■■■□□ 2.42
CROCCP3-202ENST00000420820 EHMT2Q96KQ7 1210 aa30.12■■■□□ 2.41
CROCCP3-202ENST00000420820 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
CROCCP3-202ENST00000420820 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
CROCCP3-202ENST00000420820 CSRNP3Q8WYN3 585 aa29.97■■■□□ 2.39
CROCCP3-202ENST00000420820 TNIKQ9UKE5 1360 aa29.93■■■□□ 2.38
CROCCP3-202ENST00000420820 TOP2BQ02880 1626 aa29.87■■■□□ 2.37
CROCCP3-202ENST00000420820 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
CROCCP3-202ENST00000420820 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
CROCCP3-202ENST00000420820 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
CROCCP3-202ENST00000420820 KIF21BO75037 1637 aa29.8■■■□□ 2.36
CROCCP3-202ENST00000420820 CFTRP13569 1480 aa29.75■■■□□ 2.35
CROCCP3-202ENST00000420820 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
CROCCP3-202ENST00000420820 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
CROCCP3-202ENST00000420820 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
CROCCP3-202ENST00000420820 UBTFP17480 764 aaKnown RBP29.62■■■□□ 2.33
CROCCP3-202ENST00000420820 CUX1P39880 1505 aa29.61■■■□□ 2.33
CROCCP3-202ENST00000420820 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
CROCCP3-202ENST00000420820 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
CROCCP3-202ENST00000420820 RAPGEF2Q9Y4G8 1499 aa29.5■■■□□ 2.31
CROCCP3-202ENST00000420820 ZEB1P37275 1124 aaPredicted RBP29.49■■■□□ 2.31
CROCCP3-202ENST00000420820 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
CROCCP3-202ENST00000420820 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
CROCCP3-202ENST00000420820 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
CROCCP3-202ENST00000420820 CLIP1P30622 1438 aa29.39■■■□□ 2.3
CROCCP3-202ENST00000420820 KIF27Q86VH2 1401 aa29.32■■■□□ 2.28
CROCCP3-202ENST00000420820 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
CROCCP3-202ENST00000420820 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
CROCCP3-202ENST00000420820 FGD5Q6ZNL6 1462 aa29.11■■■□□ 2.25
CROCCP3-202ENST00000420820 CUX2O14529 1486 aa29.07■■■□□ 2.24
CROCCP3-202ENST00000420820 TTBK1Q5TCY1 1321 aaPredicted RBP29.07■■■□□ 2.24
CROCCP3-202ENST00000420820 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
CROCCP3-202ENST00000420820 IGF1RP08069 1367 aa29.04■■■□□ 2.24
CROCCP3-202ENST00000420820 DNMBPQ6XZF7 1577 aa29.02■■■□□ 2.24
CROCCP3-202ENST00000420820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
CROCCP3-202ENST00000420820 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
CROCCP3-202ENST00000420820 NESP48681 1621 aa28.96■■■□□ 2.23
CROCCP3-202ENST00000420820 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
CROCCP3-202ENST00000420820 CCER1Q8TC90 406 aaPredicted RBP28.92■■■□□ 2.22
CROCCP3-202ENST00000420820 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
CROCCP3-202ENST00000420820 APLP2Q06481 763 aa28.88■■■□□ 2.21
CROCCP3-202ENST00000420820 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
CROCCP3-202ENST00000420820 ARHGAP35Q9NRY4 1499 aa28.88■■■□□ 2.21
CROCCP3-202ENST00000420820 CARMIL1Q5VZK9 1371 aa28.87■■■□□ 2.21
CROCCP3-202ENST00000420820 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
CROCCP3-202ENST00000420820 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
CROCCP3-202ENST00000420820 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
CROCCP3-202ENST00000420820 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
CROCCP3-202ENST00000420820 CUL7Q14999 1698 aa28.69■■■□□ 2.18
CROCCP3-202ENST00000420820 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
CROCCP3-202ENST00000420820 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
CROCCP3-202ENST00000420820 MAP3K1Q13233 1512 aa28.62■■■□□ 2.17
CROCCP3-202ENST00000420820 KIF21AQ7Z4S6 1674 aa28.62■■■□□ 2.17
CROCCP3-202ENST00000420820 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
CROCCP3-202ENST00000420820 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
CROCCP3-202ENST00000420820 RRBP1Q9P2E9 1410 aaKnown RBP28.57■■■□□ 2.16
CROCCP3-202ENST00000420820 CTTNBP2Q8WZ74 1663 aa28.53■■■□□ 2.16
CROCCP3-202ENST00000420820 TIAM1Q13009 1591 aa28.52■■■□□ 2.16
CROCCP3-202ENST00000420820 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
CROCCP3-202ENST00000420820 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms