RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 NISCHQ9Y2I1 1504 aa45.66■■■■■ 4.9
SUSD3-205ENST00000617293 CCDC180Q9P1Z9 1646 aa40.55■■■■■ 4.08
SUSD3-205ENST00000617293 ABCC9O60706 1549 aa39.79■■■■□ 3.96
SUSD3-205ENST00000617293 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
SUSD3-205ENST00000617293 RB1CC1Q8TDY2 1594 aa38.21■■■■□ 3.71
SUSD3-205ENST00000617293 NACADO15069 1562 aa38.15■■■■□ 3.7
SUSD3-205ENST00000617293 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
SUSD3-205ENST00000617293 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
SUSD3-205ENST00000617293 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
SUSD3-205ENST00000617293 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
SUSD3-205ENST00000617293 PABPN1Q86U42 306 aaKnown RBP eCLIP37.23■■■■□ 3.55
SUSD3-205ENST00000617293 SCRIBQ14160 1630 aa37.08■■■■□ 3.53
SUSD3-205ENST00000617293 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
SUSD3-205ENST00000617293 SHROOM4Q9ULL8 1493 aa36.58■■■■□ 3.45
SUSD3-205ENST00000617293 DNAJC5BQ9UF47 199 aa36.55■■■■□ 3.44
SUSD3-205ENST00000617293 EIF4G1Q04637 1599 aaKnown RBP36.09■■■■□ 3.37
SUSD3-205ENST00000617293 CC2D2AQ9P2K1 1620 aa35.96■■■■□ 3.35
SUSD3-205ENST00000617293 CECR2Q9BXF3 1484 aa35.73■■■■□ 3.31
SUSD3-205ENST00000617293 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
SUSD3-205ENST00000617293 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
SUSD3-205ENST00000617293 ATAD2BQ9ULI0 1458 aa35.25■■■■□ 3.23
SUSD3-205ENST00000617293 NCAPD3P42695 1498 aa35.22■■■■□ 3.23
SUSD3-205ENST00000617293 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
SUSD3-205ENST00000617293 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
SUSD3-205ENST00000617293 PEG3Q9GZU2 1588 aa35.04■■■■□ 3.2
SUSD3-205ENST00000617293 HMGXB3Q12766 1538 aa35.01■■■■□ 3.19
SUSD3-205ENST00000617293 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
SUSD3-205ENST00000617293 WIZO95785 1651 aa34.86■■■■□ 3.17
SUSD3-205ENST00000617293 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
SUSD3-205ENST00000617293 TOP2AP11388 1531 aaKnown RBP34.43■■■■□ 3.1
SUSD3-205ENST00000617293 NESP48681 1621 aa34.42■■■■□ 3.1
SUSD3-205ENST00000617293 ERCC6Q03468 1493 aa34.29■■■■□ 3.08
SUSD3-205ENST00000617293 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
SUSD3-205ENST00000617293 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
SUSD3-205ENST00000617293 PDS5BQ9NTI5 1447 aa34.09■■■■□ 3.05
SUSD3-205ENST00000617293 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.05
SUSD3-205ENST00000617293 SUPT5HO00267 1087 aaKnown RBP34.05■■■■□ 3.04
SUSD3-205ENST00000617293 CFTRP13569 1480 aa33.99■■■■□ 3.03
SUSD3-205ENST00000617293 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
SUSD3-205ENST00000617293 CUX2O14529 1486 aa33.87■■■■□ 3.01
SUSD3-205ENST00000617293 THOC2Q8NI27 1593 aaKnown RBP33.84■■■■□ 3.01
SUSD3-205ENST00000617293 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3.01
SUSD3-205ENST00000617293 CEP164Q9UPV0 1460 aa33.78■■■■□ 3
SUSD3-205ENST00000617293 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
SUSD3-205ENST00000617293 PRDM2Q13029 1718 aa33.72■■■□□ 2.99
SUSD3-205ENST00000617293 WDR62O43379 1518 aa33.58■■■□□ 2.97
SUSD3-205ENST00000617293 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
SUSD3-205ENST00000617293 TOPBP1Q92547 1522 aa33.28■■■□□ 2.92
SUSD3-205ENST00000617293 ABCC8Q09428 1581 aa33.26■■■□□ 2.92
SUSD3-205ENST00000617293 DNMBPQ6XZF7 1577 aa33.21■■■□□ 2.91
SUSD3-205ENST00000617293 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
SUSD3-205ENST00000617293 CUX1P39880 1505 aa33.02■■■□□ 2.88
SUSD3-205ENST00000617293 POLA1P09884 1462 aaPredicted RBP32.99■■■□□ 2.87
SUSD3-205ENST00000617293 ZNF608Q9ULD9 1512 aaPredicted RBP32.93■■■□□ 2.86
SUSD3-205ENST00000617293 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
SUSD3-205ENST00000617293 DNAJC5Q9H3Z4 198 aa32.9■■■□□ 2.86
SUSD3-205ENST00000617293 SOGA1O94964 1423 aa32.9■■■□□ 2.86
SUSD3-205ENST00000617293 TARBP1Q13395 1621 aaKnown RBP32.89■■■□□ 2.86
SUSD3-205ENST00000617293 RAD54L2Q9Y4B4 1467 aa32.89■■■□□ 2.86
SUSD3-205ENST00000617293 WRNQ14191 1432 aaPredicted RBP eCLIP32.83■■■□□ 2.85
SUSD3-205ENST00000617293 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.84
SUSD3-205ENST00000617293 EIF4G3O43432 1585 aaKnown RBP32.78■■■□□ 2.84
SUSD3-205ENST00000617293 SYNJ1O43426 1573 aa32.73■■■□□ 2.83
SUSD3-205ENST00000617293 TOP2BQ02880 1626 aa32.73■■■□□ 2.83
SUSD3-205ENST00000617293 TDRD9Q8NDG6 1382 aaKnown RBP32.72■■■□□ 2.83
SUSD3-205ENST00000617293 BIVM-ERCC5R4GMW8 1640 aa32.71■■■□□ 2.83
SUSD3-205ENST00000617293 WDR97A6NE52 1622 aa32.6■■■□□ 2.81
SUSD3-205ENST00000617293 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
SUSD3-205ENST00000617293 OSCARQ8IYS5 282 aa32.56■■■□□ 2.8
SUSD3-205ENST00000617293 GAPVD1Q14C86 1478 aa32.5■■■□□ 2.79
SUSD3-205ENST00000617293 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
SUSD3-205ENST00000617293 FBLN2P98095 1184 aa32.46■■■□□ 2.79
SUSD3-205ENST00000617293 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
SUSD3-205ENST00000617293 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
SUSD3-205ENST00000617293 AEBP2Q6ZN18 517 aaPredicted RBP32.42■■■□□ 2.78
SUSD3-205ENST00000617293 PBRM1Q86U86 1689 aa32.41■■■□□ 2.78
SUSD3-205ENST00000617293 CHD1O14646 1710 aa32.39■■■□□ 2.78
SUSD3-205ENST00000617293 MAGI1Q96QZ7 1491 aaPredicted RBP32.37■■■□□ 2.77
SUSD3-205ENST00000617293 CHMP7Q8WUX9 453 aaPredicted RBP32.34■■■□□ 2.77
SUSD3-205ENST00000617293 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
SUSD3-205ENST00000617293 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
SUSD3-205ENST00000617293 KIF27Q86VH2 1401 aa32.15■■■□□ 2.74
SUSD3-205ENST00000617293 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
SUSD3-205ENST00000617293 ADAMTS12P58397 1594 aa32.13■■■□□ 2.73
SUSD3-205ENST00000617293 FHAD1B1AJZ9 1412 aa32.1■■■□□ 2.73
SUSD3-205ENST00000617293 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
SUSD3-205ENST00000617293 IGF1RP08069 1367 aa32.03■■■□□ 2.72
SUSD3-205ENST00000617293 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
SUSD3-205ENST00000617293 RIMBP3CA6NJZ7 1639 aa31.98■■■□□ 2.71
SUSD3-205ENST00000617293 RIMBP3BA6NNM3 1639 aa31.98■■■□□ 2.71
SUSD3-205ENST00000617293 RIMBP3Q9UFD9 1639 aa31.98■■■□□ 2.71
SUSD3-205ENST00000617293 ARHGEF11O15085 1522 aa31.96■■■□□ 2.71
SUSD3-205ENST00000617293 NUP160Q12769 1436 aa31.9■■■□□ 2.7
SUSD3-205ENST00000617293 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
SUSD3-205ENST00000617293 CUL7Q14999 1698 aa31.89■■■□□ 2.7
SUSD3-205ENST00000617293 RUSC2Q8N2Y8 1516 aa31.89■■■□□ 2.7
SUSD3-205ENST00000617293 CARMIL1Q5VZK9 1371 aa31.85■■■□□ 2.69
SUSD3-205ENST00000617293 CYB5RLQ6IPT4 315 aa31.77■■■□□ 2.68
SUSD3-205ENST00000617293 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
SUSD3-205ENST00000617293 ARAP1Q96P48 1450 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms